Wall clock time and date at job start Tue Mar 31 2020 05:21:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.35313 * 126.12620 * 2 1 4 4 C 1.39870 * 107.92030 * 179.97438 * 3 2 1 5 5 C 1.50702 * 125.90263 * 180.02562 * 4 3 2 6 6 H 1.08998 * 109.50370 * 205.07958 * 5 4 3 7 7 C 1.53121 * 109.49954 * 325.19756 * 5 4 3 8 8 C 1.53115 * 109.16022 * 177.59607 * 7 5 4 9 9 C 1.53037 * 109.27931 * 302.34388 * 8 7 5 10 10 N 1.46849 * 109.52260 * 59.17749 * 9 8 7 11 11 C 1.46897 * 111.00207 * 174.16259 * 10 9 8 12 12 C 1.50700 * 109.46922 * 294.21210 * 11 10 9 13 13 C 1.38114 * 120.02670 * 259.99413 * 12 11 10 14 14 C 1.38393 * 120.05313 * 179.97438 * 13 12 11 15 15 Cl 1.73600 * 119.94100 * 180.02562 * 14 13 12 16 16 C 1.38429 * 120.11389 * 0.02662 * 14 13 12 17 17 C 1.38068 * 120.05729 * 359.97438 * 16 14 13 18 18 C 1.38855 * 120.02695 * 79.72721 * 12 11 10 19 19 O 1.35756 * 120.05829 * 359.97438 * 18 12 11 20 20 C 1.34829 * 117.00252 * 174.12867 * 19 18 12 21 21 H 1.08000 * 119.99761 * 5.08220 * 20 19 18 22 22 C 1.38646 * 119.99922 * 185.07677 * 20 19 18 23 23 N 1.31558 * 120.00527 * 0.02562 * 22 20 19 24 24 Si 1.86803 * 119.99932 * 180.02562 * 22 20 19 25 25 H 1.48501 * 109.46950 * 359.97438 * 24 22 20 26 26 H 1.48494 * 109.47338 * 120.00134 * 24 22 20 27 27 H 1.48502 * 109.47251 * 240.00131 * 24 22 20 28 28 C 1.46849 * 111.19883 * 298.26272 * 10 9 8 29 29 N 1.30844 * 108.20432 * 359.97438 * 4 3 2 30 30 N 1.34948 * 126.12263 * 179.68791 * 2 1 3 31 31 H 0.97004 * 126.04170 * 0.04307 * 30 2 1 32 32 H 1.09004 * 109.47096 * 90.00197 * 1 2 3 33 33 H 1.08996 * 109.46812 * 329.99720 * 1 2 3 34 34 H 1.08996 * 109.47102 * 209.99968 * 1 2 3 35 35 H 1.07994 * 126.03929 * 359.94640 * 3 2 1 36 36 H 1.09002 * 109.52189 * 297.50109 * 7 5 4 37 37 H 1.08995 * 109.52286 * 57.68884 * 7 5 4 38 38 H 1.08995 * 109.50416 * 182.40531 * 8 7 5 39 39 H 1.09005 * 109.50363 * 62.28341 * 8 7 5 40 40 H 1.08999 * 109.46252 * 299.16524 * 9 8 7 41 41 H 1.08994 * 109.45596 * 179.18700 * 9 8 7 42 42 H 1.09003 * 109.47046 * 54.20697 * 11 10 9 43 43 H 1.09001 * 109.47354 * 174.21311 * 11 10 9 44 44 H 1.07996 * 119.97420 * 0.02562 * 13 12 11 45 45 H 1.08005 * 119.97462 * 180.02562 * 16 14 13 46 46 H 1.08002 * 120.03132 * 179.97438 * 17 16 14 47 47 H 0.96997 * 120.00399 * 179.97438 * 23 22 20 48 48 H 1.09005 * 109.46005 * 301.72143 * 28 10 9 49 49 H 1.09000 * 109.45105 * 181.75528 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3048 1.0929 0.0000 4 6 3.6335 0.6559 0.0006 5 6 4.8544 1.5394 0.0013 6 1 5.6949 0.9990 -0.4338 7 6 4.5740 2.7994 -0.8224 8 6 5.7973 3.7186 -0.7669 9 6 6.1095 4.0567 0.6927 10 7 6.3708 2.8187 1.4380 11 6 6.8093 3.1122 2.8090 12 6 8.1478 3.8037 2.7711 13 6 9.3033 3.0865 3.0117 14 6 10.5328 3.7209 2.9765 15 17 11.9834 2.8164 3.2788 16 6 10.6078 5.0753 2.7007 17 6 9.4556 5.7968 2.4594 18 6 8.2207 5.1613 2.4886 19 8 7.0869 5.8672 2.2458 20 6 7.2159 7.2012 2.0991 21 1 8.1976 7.6515 2.0941 22 6 6.0884 7.9950 1.9544 23 7 4.8926 7.4467 1.9608 24 14 6.2672 9.8432 1.7503 25 1 7.7067 10.2072 1.7772 26 1 5.6756 10.2575 0.4528 27 1 5.5616 10.5343 2.8592 28 6 5.1938 1.9406 1.4386 29 7 3.6334 -0.6525 0.0015 30 7 2.3026 -1.0900 0.0059 31 1 2.0055 -2.0134 0.0104 32 1 -0.3633 0.0000 -1.0277 33 1 -0.3633 0.8899 0.5139 34 1 -0.3633 -0.8900 0.5138 35 1 1.9740 2.1210 -0.0008 36 1 4.3741 2.5211 -1.8572 37 1 3.7089 3.3189 -0.4104 38 1 5.5880 4.6364 -1.3162 39 1 6.6531 3.2130 -1.2144 40 1 5.2587 4.5744 1.1355 41 1 6.9887 4.6994 0.7364 42 1 6.0790 3.7606 3.2931 43 1 6.8970 2.1815 3.3696 44 1 9.2474 2.0296 3.2268 45 1 11.5685 5.5680 2.6734 46 1 9.5146 6.8536 2.2446 47 1 4.1037 8.0021 1.8599 48 1 4.3473 2.4683 1.8780 49 1 5.4081 1.0467 2.0243 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000076059693.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:21:35 Heat of formation + Delta-G solvation = 60.149740 kcal Electronic energy + Delta-G solvation = -32239.462835 eV Core-core repulsion = 28001.192081 eV Total energy + Delta-G solvation = -4238.270754 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 375.145 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -41.31744 -39.67394 -38.11091 -36.82813 -35.55892 -34.15161 -32.59848 -32.35544 -31.40221 -30.56638 -29.33198 -28.69687 -27.14420 -25.86520 -25.32397 -23.43491 -22.59571 -21.70458 -20.77576 -20.63009 -19.56357 -18.85749 -18.10984 -17.32285 -16.97955 -15.63746 -15.41423 -15.09644 -15.06049 -14.56080 -14.51930 -14.12153 -13.96426 -13.75481 -13.67206 -13.54840 -13.36862 -13.00061 -12.95412 -12.86759 -12.65829 -12.39467 -12.17999 -12.09935 -11.92476 -11.70940 -11.42640 -11.18241 -11.09894 -10.97915 -10.79841 -10.53090 -10.50616 -10.43102 -10.34633 -10.16087 -9.99836 -9.70556 -9.46035 -9.20010 -8.86734 -8.61201 -8.27200 -7.63531 -7.22987 -6.56103 -4.13691 1.81956 1.99548 2.10087 2.78183 2.80781 2.85311 3.06019 3.09363 3.13567 3.87783 4.22922 4.48730 4.59014 4.81634 4.90571 4.99661 5.09362 5.15682 5.19838 5.27911 5.41386 5.51733 5.55578 5.56304 5.67494 5.74104 5.77336 5.81680 5.86848 5.95423 6.00780 6.07127 6.15053 6.19697 6.30761 6.36189 6.42532 6.45276 6.52449 6.61137 6.67500 6.68336 6.88040 6.96170 6.98768 7.13418 7.16990 7.24067 7.25146 7.57091 7.71445 7.73664 7.78447 7.88937 8.90089 9.53474 10.60003 Molecular weight = 375.15amu Principal moments of inertia in cm(-1) A = 0.007041 B = 0.003125 C = 0.002270 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3975.666274 B = 8956.981778 C =12332.842422 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 C 0.078 3.922 3 C -0.261 4.261 4 C 0.097 3.903 5 C -0.002 4.002 6 H 0.090 0.910 7 C -0.106 4.106 8 C -0.114 4.114 9 C 0.052 3.948 10 N -0.532 5.532 11 C 0.115 3.885 12 C -0.139 4.139 13 C -0.048 4.048 14 C -0.122 4.122 15 Cl -0.108 7.108 16 C -0.062 4.062 17 C -0.224 4.224 18 C 0.158 3.842 19 O -0.159 6.159 20 C -0.396 4.396 21 H 0.092 0.908 22 C 0.047 3.953 23 N -0.853 5.853 24 Si 0.936 3.064 25 H -0.267 1.267 26 H -0.276 1.276 27 H -0.277 1.277 28 C 0.071 3.929 29 N -0.295 5.295 30 N -0.482 5.482 31 H 0.434 0.566 32 H 0.079 0.921 33 H 0.086 0.914 34 H 0.068 0.932 35 H 0.147 0.853 36 H 0.058 0.942 37 H 0.065 0.935 38 H 0.066 0.934 39 H 0.061 0.939 40 H 0.055 0.945 41 H 0.098 0.902 42 H 0.048 0.952 43 H 0.069 0.931 44 H 0.122 0.878 45 H 0.116 0.884 46 H 0.135 0.865 47 H 0.270 0.730 48 H 0.034 0.966 49 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.065 -10.636 -3.063 12.172 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.050 4.050 3 C -0.290 4.290 4 C -0.070 4.070 5 C -0.023 4.023 6 H 0.108 0.892 7 C -0.145 4.145 8 C -0.152 4.152 9 C -0.075 4.075 10 N -0.256 5.256 11 C -0.012 4.012 12 C -0.141 4.141 13 C -0.067 4.067 14 C -0.149 4.149 15 Cl -0.080 7.080 16 C -0.081 4.081 17 C -0.243 4.243 18 C 0.104 3.896 19 O -0.062 6.062 20 C -0.472 4.472 21 H 0.110 0.890 22 C -0.159 4.159 23 N -0.487 5.487 24 Si 0.761 3.239 25 H -0.191 1.191 26 H -0.201 1.201 27 H -0.202 1.202 28 C -0.059 4.059 29 N -0.117 5.117 30 N -0.191 5.191 31 H 0.277 0.723 32 H 0.097 0.903 33 H 0.105 0.895 34 H 0.087 0.913 35 H 0.165 0.835 36 H 0.077 0.923 37 H 0.083 0.917 38 H 0.084 0.916 39 H 0.080 0.920 40 H 0.073 0.927 41 H 0.115 0.885 42 H 0.066 0.934 43 H 0.087 0.913 44 H 0.140 0.860 45 H 0.134 0.866 46 H 0.153 0.847 47 H 0.080 0.920 48 H 0.053 0.947 49 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -4.363 -11.974 -3.319 13.170 hybrid contribution -1.053 1.528 0.325 1.884 sum -5.416 -10.447 -2.994 12.142 Atomic orbital electron populations 1.20439 0.87451 1.03854 1.03259 1.21090 0.94469 0.87898 1.01521 1.21207 0.91824 0.99228 1.16790 1.22349 0.95751 0.91167 0.97747 1.19560 0.92156 0.93583 0.97022 0.89190 1.21584 0.99107 0.94821 0.98955 1.21584 0.96999 0.98761 0.97811 1.22432 1.03533 0.89789 0.91757 1.62083 1.32489 1.17035 1.14040 1.20623 0.93068 0.98130 0.89334 1.18717 0.94646 0.91261 1.09433 1.20391 0.89580 0.98719 0.98035 1.20304 0.86247 0.92494 1.15843 1.98278 1.38796 1.75621 1.95257 1.20621 0.98175 0.91740 0.97563 1.21085 0.91466 1.01150 1.10619 1.19164 0.87242 0.91175 0.92063 1.84140 1.26503 1.20404 1.75175 1.21382 0.94784 0.79136 1.51906 0.89040 1.25197 0.94205 1.00082 0.96377 1.70011 0.97563 1.36114 1.45031 0.85713 0.78901 0.80966 0.78306 1.19116 1.20131 1.20221 1.21924 0.92289 0.96857 0.94791 1.77329 0.95882 1.12778 1.25729 1.46277 1.04234 1.07953 1.60590 0.72318 0.90285 0.89507 0.91306 0.83523 0.92341 0.91666 0.91579 0.91999 0.92674 0.88451 0.93370 0.91280 0.86014 0.86559 0.84717 0.92030 0.94733 0.91437 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.59 10.43 36.01 0.38 -0.21 16 2 C 0.08 0.83 7.21 -82.26 -0.59 0.24 16 3 C -0.26 -3.38 9.88 -40.01 -0.40 -3.78 16 4 C 0.10 1.41 6.13 -82.40 -0.51 0.90 16 5 C 0.00 -0.04 2.81 -91.69 -0.26 -0.29 16 6 H 0.09 1.40 8.14 -51.93 -0.42 0.98 16 7 C -0.11 -1.58 4.92 -26.61 -0.13 -1.71 16 8 C -0.11 -1.91 6.09 -26.65 -0.16 -2.08 16 9 C 0.05 1.02 4.05 -3.83 -0.02 1.01 16 10 N -0.53 -9.60 4.65 -236.12 -1.10 -10.70 16 11 C 0.12 2.14 4.99 -4.98 -0.02 2.12 16 12 C -0.14 -2.72 5.18 -104.44 -0.54 -3.26 16 13 C -0.05 -0.86 9.45 -39.57 -0.37 -1.23 16 14 C -0.12 -2.16 6.32 -39.45 -0.25 -2.41 16 15 Cl -0.11 -1.68 28.95 -51.86 -1.50 -3.18 16 16 C -0.06 -1.12 9.82 -39.57 -0.39 -1.50 16 17 C -0.22 -4.52 9.17 -39.40 -0.36 -4.88 16 18 C 0.16 3.45 5.37 -39.10 -0.21 3.24 16 19 O -0.16 -3.91 5.87 0.03 0.00 -3.91 16 20 C -0.40 -9.91 9.49 30.88 0.29 -9.61 16 21 H 0.09 2.16 5.20 -52.49 -0.27 1.89 16 22 C 0.05 1.16 5.49 -17.52 -0.10 1.07 16 23 N -0.85 -22.39 13.67 55.48 0.76 -21.63 16 24 Si 0.94 19.16 29.55 -169.99 -5.02 14.13 16 25 H -0.27 -5.30 7.11 56.52 0.40 -4.90 16 26 H -0.28 -5.58 7.11 56.52 0.40 -5.18 16 27 H -0.28 -5.64 7.11 56.52 0.40 -5.24 16 28 C 0.07 1.14 4.72 -3.84 -0.02 1.12 16 29 N -0.29 -4.29 12.70 33.67 0.43 -3.86 16 30 N -0.48 -5.31 7.36 33.48 0.25 -5.07 16 31 H 0.43 3.27 8.96 -182.60 -1.64 1.63 16 32 H 0.08 0.43 8.14 -51.93 -0.42 0.00 16 33 H 0.09 0.52 8.14 -51.93 -0.42 0.10 16 34 H 0.07 0.33 8.14 -51.93 -0.42 -0.09 16 35 H 0.15 1.80 7.36 -52.49 -0.39 1.41 16 36 H 0.06 0.79 8.14 -51.93 -0.42 0.37 16 37 H 0.06 0.99 7.19 -51.93 -0.37 0.61 16 38 H 0.07 1.11 8.14 -51.93 -0.42 0.69 16 39 H 0.06 1.02 8.14 -51.93 -0.42 0.59 16 40 H 0.05 1.26 7.98 -51.93 -0.41 0.85 16 41 H 0.10 2.20 4.42 -51.93 -0.23 1.97 16 42 H 0.05 1.00 7.85 -51.93 -0.41 0.59 16 43 H 0.07 1.12 7.85 -51.93 -0.41 0.72 16 44 H 0.12 1.96 8.04 -52.49 -0.42 1.53 16 45 H 0.12 1.83 8.06 -52.48 -0.42 1.41 16 46 H 0.14 2.70 5.64 -52.49 -0.30 2.40 16 47 H 0.27 6.61 8.31 -40.82 -0.34 6.27 16 48 H 0.03 0.59 8.14 -51.93 -0.42 0.17 16 49 H 0.07 1.06 8.01 -51.93 -0.42 0.64 16 LS Contribution 405.60 15.07 6.11 6.11 Total: -1.00 -28.01 405.60 -11.93 -39.94 By element: Atomic # 1 Polarization: 17.63 SS G_CDS: -8.20 Total: 9.43 kcal Atomic # 6 Polarization: -17.62 SS G_CDS: -3.65 Total: -21.27 kcal Atomic # 7 Polarization: -41.59 SS G_CDS: 0.34 Total: -41.26 kcal Atomic # 8 Polarization: -3.91 SS G_CDS: 0.00 Total: -3.91 kcal Atomic # 14 Polarization: 19.16 SS G_CDS: -5.02 Total: 14.13 kcal Atomic # 17 Polarization: -1.68 SS G_CDS: -1.50 Total: -3.18 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -28.01 -11.93 -39.94 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000076059693.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.089 kcal (2) G-P(sol) polarization free energy of solvation -28.006 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.084 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.934 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.940 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.150 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds