Wall clock time and date at job start Tue Mar 31 2020 05:27:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.30343 * 119.99396 * 2 1 4 4 N 1.37485 * 119.99602 * 185.18454 * 3 2 1 5 5 C 1.46500 * 120.00350 * 0.02562 * 4 3 2 6 6 C 1.52999 * 109.47413 * 179.97438 * 5 4 3 7 7 C 1.53001 * 109.47122 * 180.02562 * 6 5 4 8 8 C 1.50700 * 109.46980 * 180.02562 * 7 6 5 9 9 H 1.08001 * 120.00148 * 359.97438 * 8 7 6 10 10 C 1.37878 * 120.00079 * 180.02562 * 8 7 6 11 11 N 1.31517 * 119.99673 * 359.97438 * 10 8 7 12 12 Si 1.86793 * 120.00190 * 179.97438 * 10 8 7 13 13 H 1.48498 * 109.47352 * 90.00028 * 12 10 8 14 14 H 1.48504 * 109.47353 * 210.00109 * 12 10 8 15 15 H 1.48500 * 109.47137 * 329.99941 * 12 10 8 16 16 N 1.37486 * 120.00349 * 5.19288 * 3 2 1 17 17 C 1.46497 * 120.00055 * 185.21690 * 16 3 2 18 18 C 1.50695 * 109.47333 * 175.01398 * 17 16 3 19 19 C 1.39917 * 126.04171 * 89.97018 * 18 17 16 20 20 N 1.30875 * 108.24594 * 180.02562 * 19 18 17 21 21 N 1.40088 * 108.21997 * 359.97438 * 20 19 18 22 22 C 1.40210 * 126.05553 * 179.97438 * 21 20 19 23 23 C 1.38829 * 120.05574 * 179.75047 * 22 21 20 24 24 C 1.38113 * 119.94784 * 179.77149 * 23 22 21 25 25 C 1.38391 * 120.04866 * 0.52858 * 24 23 22 26 26 Cl 1.73597 * 119.94305 * 179.72153 * 25 24 23 27 27 C 1.38387 * 120.10812 * 359.70332 * 25 24 23 28 28 C 1.38102 * 120.05259 * 0.04102 * 27 25 24 29 29 C 1.35217 * 107.89233 * 0.26669 * 21 20 19 30 30 H 1.08996 * 109.47267 * 295.00411 * 1 2 3 31 31 H 1.08999 * 109.47104 * 55.00617 * 1 2 3 32 32 H 1.09000 * 109.46850 * 175.00924 * 1 2 3 33 33 H 0.97000 * 119.99974 * 180.02562 * 4 3 2 34 34 H 1.09001 * 109.47252 * 300.00046 * 5 4 3 35 35 H 1.09001 * 109.46990 * 59.99926 * 5 4 3 36 36 H 1.09001 * 109.47151 * 300.00356 * 6 5 4 37 37 H 1.09001 * 109.46901 * 60.00118 * 6 5 4 38 38 H 1.09001 * 109.46819 * 299.99927 * 7 6 5 39 39 H 1.08994 * 109.46901 * 60.00144 * 7 6 5 40 40 H 0.96998 * 119.99926 * 179.97438 * 11 10 8 41 41 H 0.96999 * 119.99936 * 5.21655 * 16 3 2 42 42 H 1.09003 * 109.47334 * 55.00751 * 17 16 3 43 43 H 1.09010 * 109.46889 * 295.00770 * 17 16 3 44 44 H 1.08004 * 125.87190 * 0.05891 * 19 18 17 45 45 H 1.08004 * 120.02733 * 0.02562 * 23 22 21 46 46 H 1.07997 * 119.97328 * 180.25420 * 24 23 22 47 47 H 1.08005 * 119.96943 * 180.02562 * 27 25 24 48 48 H 1.08005 * 120.02279 * 179.97438 * 28 27 25 49 49 H 1.07998 * 126.14464 * 179.69549 * 29 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1166 1.1289 0.0000 4 7 3.4873 1.1314 -0.1076 5 6 4.2154 -0.1347 -0.2228 6 6 5.7154 0.1474 -0.3284 7 6 6.4757 -1.1749 -0.4494 8 6 7.9532 -0.8970 -0.5528 9 1 8.3139 0.1208 -0.5345 10 6 8.8446 -1.9422 -0.6718 11 7 8.4053 -3.1816 -0.6945 12 14 10.6760 -1.5979 -0.8006 13 1 11.2716 -1.5713 0.5594 14 1 11.3249 -2.6647 -1.6045 15 1 10.8874 -0.2839 -1.4594 16 7 1.4334 2.3171 0.1078 17 6 2.1522 3.5884 -0.0069 18 6 1.1662 4.7276 0.0239 19 6 0.7194 5.3989 1.1673 20 7 -0.1289 6.3232 0.7945 21 7 -0.2492 6.2705 -0.6002 22 6 -1.0618 7.0960 -1.3902 23 6 -1.0815 6.9378 -2.7693 24 6 -1.8864 7.7490 -3.5450 25 6 -2.6646 8.7261 -2.9493 26 17 -3.6698 9.7490 -3.9275 27 6 -2.6430 8.8889 -1.5753 28 6 -1.8438 8.0767 -0.7951 29 6 0.5523 5.2783 -1.0491 30 1 -0.3633 0.4344 0.9313 31 1 -0.3633 0.5893 -0.8419 32 1 -0.3633 -1.0238 -0.0894 33 1 3.9723 1.9714 -0.1072 34 1 4.0215 -0.7468 0.6580 35 1 3.8822 -0.6655 -1.1146 36 1 5.9089 0.7593 -1.2095 37 1 6.0489 0.6784 0.5632 38 1 6.2822 -1.7871 0.4315 39 1 6.1421 -1.7054 -1.3411 40 1 9.0323 -3.9169 -0.7786 41 1 0.4754 2.3136 0.2597 42 1 2.7038 3.6105 -0.9468 43 1 2.8488 3.6883 0.8256 44 1 1.0228 5.1906 2.1827 45 1 -0.4710 6.1782 -3.2350 46 1 -1.9052 7.6235 -4.6175 47 1 -3.2516 9.6520 -1.1127 48 1 -1.8270 8.2045 0.2773 49 1 0.6807 4.9799 -2.0791 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000095963171.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:27:39 Heat of formation + Delta-G solvation = 124.831092 kcal Electronic energy + Delta-G solvation = -29187.535346 eV Core-core repulsion = 24984.362137 eV Total energy + Delta-G solvation = -4203.173209 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 375.152 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.23054 -39.84935 -38.68983 -37.14082 -35.43314 -34.41175 -33.37063 -33.05839 -32.04548 -31.09270 -30.56031 -29.58609 -27.00192 -26.03128 -25.23230 -24.03007 -23.48231 -22.97558 -21.44917 -20.65954 -20.33311 -19.45799 -18.84778 -17.42082 -17.22291 -16.40472 -16.20524 -16.13396 -15.79688 -15.51311 -15.12576 -14.70148 -14.50261 -14.41298 -14.26786 -14.10740 -14.04000 -13.73732 -13.63290 -13.35944 -12.95953 -12.87784 -12.56185 -12.33380 -12.28184 -12.21631 -12.14558 -11.67656 -11.53414 -11.26230 -11.02416 -10.73779 -10.70058 -10.61390 -10.52882 -9.89290 -9.74575 -9.69172 -9.42260 -9.06694 -8.88949 -8.56984 -8.55880 -8.32602 -7.52034 -5.97472 -4.00145 -0.00519 0.47233 1.43770 1.44470 1.73189 2.04132 2.90403 3.15918 3.21269 3.33291 3.39708 3.42427 3.70027 3.98441 4.02823 4.12233 4.19654 4.41079 4.47826 4.54782 4.58546 4.73578 4.86544 4.99050 5.16459 5.21770 5.27812 5.34019 5.38314 5.44857 5.49230 5.58389 5.68638 5.75905 5.79295 5.88726 5.97427 5.98944 6.03859 6.34095 6.45890 6.55460 6.76407 6.98970 6.99287 7.04026 7.13734 7.44875 7.70170 7.84445 8.02508 8.08792 8.43863 8.89676 9.06844 9.63697 11.13795 Molecular weight = 375.15amu Principal moments of inertia in cm(-1) A = 0.013899 B = 0.001246 C = 0.001206 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2014.117151 B =22470.753398 C =23213.853253 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.054 3.946 2 N -0.671 5.671 3 C 0.622 3.378 4 N -0.723 5.723 5 C 0.146 3.854 6 C -0.122 4.122 7 C 0.025 3.975 8 C -0.521 4.521 9 H 0.054 0.946 10 C 0.057 3.943 11 N -0.893 5.893 12 Si 0.891 3.109 13 H -0.281 1.281 14 H -0.287 1.287 15 H -0.275 1.275 16 N -0.767 5.767 17 C 0.192 3.808 18 C -0.237 4.237 19 C 0.079 3.921 20 N -0.288 5.288 21 N -0.325 5.325 22 C 0.169 3.831 23 C -0.129 4.129 24 C -0.080 4.080 25 C -0.048 4.048 26 Cl -0.062 7.062 27 C -0.084 4.084 28 C -0.108 4.108 29 C 0.077 3.923 30 H 0.025 0.975 31 H 0.025 0.975 32 H 0.067 0.933 33 H 0.398 0.602 34 H 0.061 0.939 35 H 0.060 0.940 36 H 0.051 0.949 37 H 0.051 0.949 38 H 0.019 0.981 39 H 0.019 0.981 40 H 0.260 0.740 41 H 0.405 0.595 42 H 0.070 0.930 43 H 0.071 0.929 44 H 0.194 0.806 45 H 0.141 0.859 46 H 0.145 0.855 47 H 0.144 0.856 48 H 0.148 0.852 49 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -25.776 27.262 -2.828 37.625 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 N -0.414 5.414 3 C 0.259 3.741 4 N -0.364 5.364 5 C 0.023 3.977 6 C -0.160 4.160 7 C -0.013 4.013 8 C -0.560 4.560 9 H 0.073 0.927 10 C -0.144 4.144 11 N -0.533 5.533 12 Si 0.719 3.281 13 H -0.207 1.207 14 H -0.212 1.212 15 H -0.199 1.199 16 N -0.416 5.416 17 C 0.066 3.934 18 C -0.248 4.248 19 C -0.109 4.109 20 N -0.105 5.105 21 N -0.100 5.100 22 C 0.076 3.924 23 C -0.150 4.150 24 C -0.100 4.100 25 C -0.075 4.075 26 Cl -0.034 7.034 27 C -0.104 4.104 28 C -0.128 4.128 29 C -0.067 4.067 30 H 0.044 0.956 31 H 0.043 0.957 32 H 0.086 0.914 33 H 0.233 0.767 34 H 0.079 0.921 35 H 0.079 0.921 36 H 0.069 0.931 37 H 0.070 0.930 38 H 0.037 0.963 39 H 0.037 0.963 40 H 0.070 0.930 41 H 0.242 0.758 42 H 0.088 0.912 43 H 0.089 0.911 44 H 0.210 0.790 45 H 0.159 0.841 46 H 0.163 0.837 47 H 0.162 0.838 48 H 0.166 0.834 49 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -26.327 27.150 -2.619 37.909 hybrid contribution 0.851 0.659 -0.308 1.120 sum -25.476 27.809 -2.927 37.827 Atomic orbital electron populations 1.21646 0.89243 1.01218 0.97640 1.72668 1.07333 1.19609 1.41820 1.19231 0.85170 0.81804 0.87944 1.44257 1.01188 1.10167 1.80825 1.21408 0.91235 0.83409 1.01680 1.21901 0.91770 1.01879 1.00479 1.19006 0.94039 0.90621 0.97588 1.21227 0.91803 0.92700 1.50249 0.92730 1.25017 0.98849 0.95147 0.95397 1.69968 1.34512 0.98344 1.50436 0.86611 0.85564 0.77887 0.78012 1.20701 1.21250 1.19948 1.45580 1.10735 1.03148 1.82125 1.19498 0.91944 0.80130 1.01870 1.20135 1.07875 1.04672 0.92128 1.24115 0.93936 0.92556 1.00269 1.77508 1.21956 1.23270 0.87803 1.45784 1.33057 1.25766 1.05361 1.17606 0.93181 0.92365 0.89262 1.20805 1.01669 1.01850 0.90714 1.20892 0.94653 0.93530 1.00895 1.20992 0.98064 0.96392 0.92051 1.98396 1.67681 1.66872 1.70405 1.20991 0.98601 0.99424 0.91341 1.20870 0.96039 0.94377 1.01502 1.22519 0.93070 0.90293 1.00769 0.95644 0.95666 0.91388 0.76731 0.92107 0.92140 0.93052 0.93019 0.96264 0.96267 0.92991 0.75843 0.91169 0.91104 0.78951 0.84093 0.83695 0.83849 0.83431 0.80179 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.70 9.95 59.85 0.60 1.30 16 2 N -0.67 -10.80 10.17 -68.58 -0.70 -11.50 16 3 C 0.62 8.57 8.36 -320.08 -2.68 5.89 16 4 N -0.72 -10.11 5.57 -61.79 -0.34 -10.46 16 5 C 0.15 2.55 5.67 -4.04 -0.02 2.53 16 6 C -0.12 -2.38 5.27 -26.73 -0.14 -2.52 16 7 C 0.03 0.64 4.97 -27.88 -0.14 0.50 16 8 C -0.52 -14.55 9.11 -34.44 -0.31 -14.86 16 9 H 0.05 1.47 7.74 -52.49 -0.41 1.06 16 10 C 0.06 1.63 5.46 -17.82 -0.10 1.53 16 11 N -0.89 -26.81 13.29 55.43 0.74 -26.08 16 12 Si 0.89 21.46 29.54 -169.99 -5.02 16.44 16 13 H -0.28 -6.67 7.11 56.52 0.40 -6.27 16 14 H -0.29 -6.86 7.11 56.52 0.40 -6.45 16 15 H -0.27 -6.45 7.11 56.52 0.40 -6.04 16 16 N -0.77 -7.56 5.50 -62.97 -0.35 -7.91 16 17 C 0.19 1.43 5.53 -5.20 -0.03 1.40 16 18 C -0.24 -1.69 5.47 -105.03 -0.57 -2.26 16 19 C 0.08 0.59 11.96 -17.33 -0.21 0.39 16 20 N -0.29 -2.59 11.87 30.64 0.36 -2.22 16 21 N -0.33 -2.59 3.80 -10.69 -0.04 -2.63 16 22 C 0.17 1.18 6.69 -83.58 -0.56 0.62 16 23 C -0.13 -0.67 9.45 -39.41 -0.37 -1.05 16 24 C -0.08 -0.39 9.82 -39.57 -0.39 -0.78 16 25 C -0.05 -0.26 6.32 -39.47 -0.25 -0.51 16 26 Cl -0.06 -0.35 28.95 -51.86 -1.50 -1.85 16 27 C -0.08 -0.45 9.82 -39.58 -0.39 -0.84 16 28 C -0.11 -0.69 9.66 -39.41 -0.38 -1.08 16 29 C 0.08 0.52 10.71 -17.10 -0.18 0.33 16 30 H 0.03 0.29 7.88 -51.93 -0.41 -0.11 16 31 H 0.02 0.29 7.99 -51.93 -0.41 -0.12 16 32 H 0.07 0.87 8.14 -51.93 -0.42 0.45 16 33 H 0.40 4.63 7.03 -40.82 -0.29 4.34 16 34 H 0.06 1.15 8.14 -51.93 -0.42 0.73 16 35 H 0.06 1.14 8.14 -51.93 -0.42 0.72 16 36 H 0.05 0.96 8.14 -51.93 -0.42 0.54 16 37 H 0.05 0.97 8.14 -51.93 -0.42 0.55 16 38 H 0.02 0.52 8.14 -51.93 -0.42 0.09 16 39 H 0.02 0.51 8.14 -51.93 -0.42 0.09 16 40 H 0.26 7.38 8.31 -40.82 -0.34 7.04 16 41 H 0.40 3.84 6.81 -40.82 -0.28 3.56 16 42 H 0.07 0.50 7.99 -51.93 -0.41 0.09 16 43 H 0.07 0.50 8.03 -51.92 -0.42 0.08 16 44 H 0.19 0.99 8.06 -52.48 -0.42 0.57 16 45 H 0.14 0.46 6.74 -52.48 -0.35 0.11 16 46 H 0.15 0.44 8.06 -52.49 -0.42 0.02 16 47 H 0.14 0.51 8.06 -52.48 -0.42 0.09 16 48 H 0.15 0.95 7.70 -52.48 -0.40 0.54 16 49 H 0.18 0.76 7.04 -52.49 -0.37 0.39 16 LS Contribution 428.67 15.07 6.46 6.46 Total: -1.00 -33.46 428.67 -13.63 -47.09 By element: Atomic # 1 Polarization: 9.17 SS G_CDS: -7.12 Total: 2.05 kcal Atomic # 6 Polarization: -3.27 SS G_CDS: -6.13 Total: -9.40 kcal Atomic # 7 Polarization: -60.47 SS G_CDS: -0.33 Total: -60.80 kcal Atomic # 14 Polarization: 21.46 SS G_CDS: -5.02 Total: 16.44 kcal Atomic # 17 Polarization: -0.35 SS G_CDS: -1.50 Total: -1.85 kcal Total LS contribution 6.46 Total: 6.46 kcal Total: -33.46 -13.63 -47.09 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000095963171.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 171.922 kcal (2) G-P(sol) polarization free energy of solvation -33.457 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 138.466 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.635 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -47.091 kcal (6) G-S(sol) free energy of system = (1) + (5) 124.831 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds