Wall clock time and date at job start Tue Mar 31 2020 05:22:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.52994 * 109.47601 * 2 1 4 4 C 1.53003 * 109.47122 * 64.99957 * 3 2 1 5 5 C 1.52998 * 109.47217 * 185.00115 * 4 3 2 6 6 N 1.46499 * 109.47605 * 185.00161 * 3 2 1 7 7 N 1.39932 * 125.74828 * 299.97814 * 6 3 2 8 8 C 1.30447 * 108.90497 * 179.75429 * 7 6 3 9 9 C 1.41302 * 108.02191 * 0.40562 * 8 7 6 10 10 C 1.47392 * 126.41877 * 179.85301 * 9 8 7 11 11 O 1.21611 * 119.99790 * 179.68994 * 10 9 8 12 12 N 1.34773 * 119.99986 * 359.68855 * 10 9 8 13 13 C 1.39178 * 119.99884 * 185.32105 * 12 10 9 14 14 C 1.39487 * 119.84497 * 325.99800 * 13 12 10 15 15 C 1.36367 * 120.18163 * 180.27688 * 14 13 12 16 16 C 1.40896 * 119.84795 * 359.48163 * 15 14 13 17 17 C 1.41139 * 120.15990 * 180.25422 * 16 15 14 18 18 H 1.08001 * 119.99126 * 323.79186 * 17 16 15 19 19 C 1.39890 * 120.00705 * 143.78953 * 17 16 15 20 20 N 1.30868 * 120.00586 * 173.59191 * 19 17 16 21 21 Si 1.86807 * 119.99896 * 353.59211 * 19 17 16 22 22 H 1.48499 * 109.47032 * 89.50873 * 21 19 17 23 23 H 1.48494 * 109.47149 * 209.51220 * 21 19 17 24 24 H 1.48504 * 109.47094 * 329.51420 * 21 19 17 25 25 C 1.40855 * 119.68529 * 0.49447 * 16 15 14 26 26 C 1.36464 * 119.82307 * 359.75715 * 25 16 15 27 27 Cl 1.73601 * 119.92749 * 180.02562 * 26 25 16 28 28 C 1.34261 * 125.75438 * 119.99381 * 6 3 2 29 29 C 1.50695 * 126.29482 * 359.97150 * 28 6 3 30 30 H 1.08991 * 109.47311 * 179.97438 * 1 2 3 31 31 H 1.08999 * 109.46968 * 300.00266 * 1 2 3 32 32 H 1.08999 * 109.46670 * 59.99673 * 1 2 3 33 33 H 1.08999 * 109.46968 * 239.99734 * 2 1 3 34 34 H 1.08999 * 109.46670 * 120.00327 * 2 1 3 35 35 H 1.09004 * 109.47178 * 305.00630 * 3 2 1 36 36 H 1.09003 * 109.47118 * 305.00369 * 4 3 2 37 37 H 1.08993 * 109.47043 * 64.99953 * 4 3 2 38 38 H 1.09001 * 109.46942 * 60.00136 * 5 4 3 39 39 H 1.09004 * 109.47063 * 180.02562 * 5 4 3 40 40 H 1.09003 * 109.47283 * 300.00152 * 5 4 3 41 41 H 1.08000 * 125.99218 * 180.24683 * 8 7 6 42 42 H 0.97003 * 120.00005 * 5.32986 * 12 10 9 43 43 H 1.07998 * 119.90819 * 0.02562 * 14 13 12 44 44 H 1.07999 * 120.07595 * 179.70718 * 15 14 13 45 45 H 0.97004 * 120.00791 * 180.02562 * 20 19 17 46 46 H 1.08007 * 120.08819 * 179.77701 * 25 16 15 47 47 H 1.09004 * 109.46980 * 269.99467 * 29 28 6 48 48 H 1.08993 * 109.47360 * 29.98852 * 29 28 6 49 49 H 1.09001 * 109.47376 * 149.99968 * 29 28 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0402 1.4424 0.0000 4 6 1.6354 2.1265 1.3074 5 6 2.0356 3.6023 1.2559 6 7 3.5002 1.4442 -0.1204 7 7 4.3951 0.8493 0.7759 8 6 5.6125 1.0446 0.3498 9 6 5.5420 1.7908 -0.8480 10 6 6.6817 2.2384 -1.6685 11 8 6.4855 2.8734 -2.6869 12 7 7.9412 1.9440 -1.2900 13 6 9.0203 2.4594 -2.0021 14 6 8.9189 2.6402 -3.3815 15 6 9.9739 3.1394 -4.0868 16 6 11.1651 3.4833 -3.4176 17 6 12.2591 4.0055 -4.1403 18 1 12.4717 3.6424 -5.1350 19 6 13.0680 4.9932 -3.5685 20 7 14.1534 5.3877 -4.1841 21 14 12.5989 5.7491 -1.9258 22 1 13.2011 4.9546 -0.8253 23 1 13.1020 7.1448 -1.8615 24 1 11.1206 5.7488 -1.7850 25 6 11.2608 3.2987 -2.0245 26 6 10.1988 2.7933 -1.3323 27 17 10.3135 2.5653 0.3848 28 6 4.2051 2.0170 -1.1091 29 6 3.6410 2.7684 -2.2873 30 1 -0.3633 -1.0276 -0.0005 31 1 -0.3633 0.5139 0.8900 32 1 -0.3632 0.5139 -0.8900 33 1 1.8934 -0.5139 -0.8900 34 1 1.8933 -0.5139 0.8900 35 1 1.6055 1.9815 -0.8418 36 1 0.5564 2.0470 1.4402 37 1 2.1409 1.6419 2.1426 38 1 1.5301 4.0869 0.4206 39 1 1.7477 4.0895 2.1875 40 1 3.1146 3.6818 1.1231 41 1 6.5161 0.6990 0.8299 42 1 8.0957 1.3728 -0.5213 43 1 8.0039 2.3803 -3.8929 44 1 9.8952 3.2742 -5.1555 45 1 14.7145 6.0724 -3.7874 46 1 12.1721 3.5567 -1.5054 47 1 3.4623 2.0746 -3.1089 48 1 2.7020 3.2416 -2.0007 49 1 4.3509 3.5322 -2.6048 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000408519793.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:22:42 Heat of formation + Delta-G solvation = 35.298224 kcal Electronic energy + Delta-G solvation = -31478.640806 eV Core-core repulsion = 27239.292410 eV Total energy + Delta-G solvation = -4239.348397 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 375.145 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -41.69159 -39.57392 -37.72200 -37.08768 -35.77184 -34.54243 -33.21169 -32.66569 -32.23956 -31.29166 -29.88624 -29.60011 -27.51276 -26.63051 -24.95311 -23.33122 -22.71865 -22.40937 -21.85088 -20.63442 -19.60391 -19.44686 -17.78645 -17.36734 -17.02480 -16.17433 -15.86658 -15.39568 -15.24005 -14.78232 -14.50675 -14.46637 -14.28965 -14.20663 -13.84819 -13.54756 -13.29005 -13.05516 -12.97069 -12.91581 -12.80714 -12.68372 -12.63265 -12.45043 -12.40261 -12.21907 -11.98010 -11.54041 -11.44515 -11.32335 -11.11781 -10.93938 -10.84116 -10.82396 -10.74916 -10.32334 -10.09101 -9.85767 -9.57343 -9.50449 -9.34452 -8.90910 -8.65472 -7.80872 -7.22508 -6.93622 -4.53815 1.45309 2.05601 2.11340 2.35326 2.51837 2.87296 3.10419 3.19308 3.30788 3.63732 3.75324 3.96102 3.97222 4.28223 4.35461 4.42669 4.44594 4.60872 4.71623 4.82282 4.86353 4.92375 4.99402 5.15731 5.19182 5.23400 5.27652 5.40272 5.41246 5.44874 5.54507 5.57937 5.67339 5.72636 5.79473 5.87898 5.88299 5.99116 6.30549 6.36598 6.47579 6.51803 6.69391 6.75194 6.97124 7.13159 7.25587 7.46644 7.47359 7.65660 7.93261 8.02502 8.24714 8.46191 8.69533 8.72807 10.07261 Molecular weight = 375.15amu Principal moments of inertia in cm(-1) A = 0.018437 B = 0.002131 C = 0.002063 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1518.302467 B =13137.211112 C =13569.345150 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.131 4.131 3 C 0.158 3.842 4 C -0.134 4.134 5 C -0.155 4.155 6 N -0.353 5.353 7 N -0.295 5.295 8 C 0.080 3.920 9 C -0.290 4.290 10 C 0.587 3.413 11 O -0.538 6.538 12 N -0.648 5.648 13 C 0.019 3.981 14 C -0.064 4.064 15 C -0.187 4.187 16 C 0.094 3.906 17 C -0.440 4.440 18 H 0.096 0.904 19 C 0.082 3.918 20 N -0.813 5.813 21 Si 0.903 3.097 22 H -0.266 1.266 23 H -0.290 1.290 24 H -0.241 1.241 25 C -0.217 4.217 26 C 0.000 4.000 27 Cl -0.113 7.113 28 C 0.156 3.844 29 C -0.100 4.100 30 H 0.062 0.938 31 H 0.061 0.939 32 H 0.057 0.943 33 H 0.069 0.931 34 H 0.078 0.922 35 H 0.103 0.897 36 H 0.084 0.916 37 H 0.079 0.921 38 H 0.055 0.945 39 H 0.060 0.940 40 H 0.055 0.945 41 H 0.186 0.814 42 H 0.398 0.602 43 H 0.128 0.872 44 H 0.111 0.889 45 H 0.286 0.714 46 H 0.116 0.884 47 H 0.085 0.915 48 H 0.066 0.934 49 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -24.096 -7.260 9.640 26.949 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.170 4.170 3 C 0.057 3.943 4 C -0.172 4.172 5 C -0.213 4.213 6 N -0.133 5.133 7 N -0.113 5.113 8 C -0.108 4.108 9 C -0.305 4.305 10 C 0.375 3.625 11 O -0.416 6.416 12 N -0.290 5.290 13 C -0.075 4.075 14 C -0.084 4.084 15 C -0.207 4.207 16 C 0.091 3.909 17 C -0.469 4.469 18 H 0.114 0.886 19 C -0.136 4.136 20 N -0.437 5.437 21 Si 0.730 3.270 22 H -0.192 1.192 23 H -0.217 1.217 24 H -0.164 1.164 25 C -0.237 4.237 26 C -0.028 4.028 27 Cl -0.084 7.084 28 C 0.024 3.976 29 C -0.158 4.158 30 H 0.081 0.919 31 H 0.080 0.920 32 H 0.076 0.924 33 H 0.087 0.913 34 H 0.097 0.903 35 H 0.121 0.879 36 H 0.102 0.898 37 H 0.097 0.903 38 H 0.074 0.926 39 H 0.079 0.921 40 H 0.074 0.926 41 H 0.203 0.797 42 H 0.233 0.767 43 H 0.146 0.854 44 H 0.130 0.870 45 H 0.097 0.903 46 H 0.133 0.867 47 H 0.104 0.896 48 H 0.085 0.915 49 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -24.879 -7.197 9.967 27.751 hybrid contribution 0.796 0.414 0.820 1.216 sum -24.083 -6.783 10.787 27.247 Atomic orbital electron populations 1.21812 0.94306 1.02563 1.02261 1.21842 0.96513 0.94756 1.03846 1.21556 0.74202 0.98208 1.00344 1.21952 1.02050 0.96350 0.96822 1.21788 1.02050 0.95371 1.02047 1.48568 1.06371 1.40963 1.17432 1.77078 0.99084 1.20303 1.14874 1.24004 0.96098 0.96529 0.94150 1.20008 0.92787 1.15596 1.02066 1.17167 0.81722 0.79096 0.84478 1.90695 1.84826 1.41017 1.25105 1.42655 1.04277 1.49816 1.32301 1.16814 0.87116 1.12652 0.90899 1.20600 0.98791 0.98058 0.90950 1.20901 0.92612 1.07750 0.99425 1.17719 0.92575 0.90389 0.90262 1.19422 1.06640 1.17451 1.03342 0.88618 1.26108 0.92809 0.95903 0.98773 1.69628 1.10372 1.24979 1.38747 0.86435 0.82070 0.77278 0.81207 1.19203 1.21710 1.16434 1.20634 0.97793 1.09767 0.95499 1.20219 0.96252 1.04879 0.81443 1.98271 1.98368 1.96103 1.15694 1.21469 0.90938 0.93951 0.91261 1.20702 1.01580 1.00601 0.92956 0.91897 0.91994 0.92359 0.91270 0.90316 0.87909 0.89802 0.90254 0.92588 0.92134 0.92559 0.79685 0.76709 0.85430 0.87045 0.90333 0.86655 0.89638 0.91494 0.87200 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.66 9.67 37.16 0.36 -0.30 16 2 C -0.13 -0.86 5.65 -26.73 -0.15 -1.01 16 3 C 0.16 1.17 2.48 -67.93 -0.17 1.00 16 4 C -0.13 -0.90 5.40 -26.73 -0.14 -1.04 16 5 C -0.16 -1.17 9.80 37.16 0.36 -0.80 16 6 N -0.35 -3.74 2.70 -50.16 -0.14 -3.88 16 7 N -0.29 -3.57 12.33 30.86 0.38 -3.19 16 8 C 0.08 0.98 11.51 -16.98 -0.20 0.78 16 9 C -0.29 -4.05 6.13 -105.07 -0.64 -4.69 16 10 C 0.59 9.96 7.66 -12.54 -0.10 9.86 16 11 O -0.54 -10.43 12.14 5.27 0.06 -10.36 16 12 N -0.65 -11.09 5.02 -10.69 -0.05 -11.14 16 13 C 0.02 0.40 6.33 -83.55 -0.53 -0.13 16 14 C -0.06 -1.38 8.63 -39.79 -0.34 -1.72 16 15 C -0.19 -4.27 9.74 -39.25 -0.38 -4.65 16 16 C 0.09 2.32 5.07 -106.80 -0.54 1.78 16 17 C -0.44 -11.57 9.59 -37.86 -0.36 -11.93 16 18 H 0.10 2.62 8.06 -52.49 -0.42 2.19 16 19 C 0.08 2.13 5.50 -17.34 -0.10 2.04 16 20 N -0.81 -21.45 13.93 55.54 0.77 -20.68 16 21 Si 0.90 20.87 24.43 -169.99 -4.15 16.72 16 22 H -0.27 -5.97 6.67 56.52 0.38 -5.59 16 23 H -0.29 -6.48 7.11 56.52 0.40 -6.07 16 24 H -0.24 -5.77 6.64 56.52 0.38 -5.40 16 25 C -0.22 -5.11 6.63 -39.23 -0.26 -5.37 16 26 C 0.00 0.01 6.30 -39.71 -0.25 -0.24 16 27 Cl -0.11 -2.04 27.90 -51.86 -1.45 -3.49 16 28 C 0.16 1.88 7.01 -81.59 -0.57 1.31 16 29 C -0.10 -1.01 9.40 36.00 0.34 -0.67 16 30 H 0.06 0.26 8.14 -51.93 -0.42 -0.16 16 31 H 0.06 0.23 6.46 -51.93 -0.34 -0.10 16 32 H 0.06 0.22 8.14 -51.93 -0.42 -0.20 16 33 H 0.07 0.51 8.14 -51.93 -0.42 0.09 16 34 H 0.08 0.60 8.14 -51.93 -0.42 0.18 16 35 H 0.10 0.61 6.63 -51.93 -0.34 0.26 16 36 H 0.08 0.39 6.34 -51.93 -0.33 0.06 16 37 H 0.08 0.65 8.14 -51.93 -0.42 0.23 16 38 H 0.06 0.36 8.14 -51.93 -0.42 -0.06 16 39 H 0.06 0.41 8.14 -51.93 -0.42 -0.01 16 40 H 0.06 0.57 7.75 -51.93 -0.40 0.16 16 41 H 0.19 1.79 7.51 -52.49 -0.39 1.40 16 42 H 0.40 5.78 6.99 -40.82 -0.29 5.50 16 43 H 0.13 2.66 6.08 -52.49 -0.32 2.34 16 44 H 0.11 2.39 8.06 -52.49 -0.42 1.97 16 45 H 0.29 6.89 8.30 -40.82 -0.34 6.55 16 46 H 0.12 2.75 4.63 -52.48 -0.24 2.50 16 47 H 0.09 0.78 8.14 -51.93 -0.42 0.36 16 48 H 0.07 0.49 7.07 -51.93 -0.37 0.12 16 49 H 0.11 1.36 6.50 -51.93 -0.34 1.03 16 LS Contribution 406.87 15.07 6.13 6.13 Total: -1.00 -29.47 406.87 -8.88 -38.36 By element: Atomic # 1 Polarization: 14.11 SS G_CDS: -6.77 Total: 7.34 kcal Atomic # 6 Polarization: -12.12 SS G_CDS: -3.67 Total: -15.80 kcal Atomic # 7 Polarization: -39.86 SS G_CDS: 0.97 Total: -38.89 kcal Atomic # 8 Polarization: -10.43 SS G_CDS: 0.06 Total: -10.36 kcal Atomic # 14 Polarization: 20.87 SS G_CDS: -4.15 Total: 16.72 kcal Atomic # 17 Polarization: -2.04 SS G_CDS: -1.45 Total: -3.49 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -29.47 -8.88 -38.36 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000408519793.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.655 kcal (2) G-P(sol) polarization free energy of solvation -29.474 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.181 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.883 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.357 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.298 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds