Wall clock time and date at job start Tue Mar 31 2020 05:22:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52997 * 109.47198 * 2 1 4 4 C 1.53004 * 109.47089 * 64.99889 * 3 2 1 5 5 C 1.52997 * 109.47683 * 184.99805 * 4 3 2 6 6 N 1.46497 * 109.47358 * 184.99696 * 3 2 1 7 7 N 1.39939 * 125.75249 * 299.97778 * 6 3 2 8 8 C 1.30448 * 108.90115 * 179.76931 * 7 6 3 9 9 C 1.41294 * 108.02671 * 0.38845 * 8 7 6 10 10 C 1.47397 * 126.42077 * 179.87925 * 9 8 7 11 11 O 1.21608 * 120.00193 * 179.68629 * 10 9 8 12 12 N 1.34773 * 119.99801 * 359.68466 * 10 9 8 13 13 C 1.39058 * 120.00168 * 183.67472 * 12 10 9 14 14 C 1.38634 * 120.21421 * 332.56312 * 13 12 10 15 15 C 1.38174 * 120.17334 * 180.23442 * 14 13 12 16 16 C 1.39013 * 120.60370 * 359.49011 * 15 14 13 17 17 Cl 1.73599 * 119.78797 * 180.26310 * 16 15 14 18 18 C 1.37543 * 120.42441 * 0.51286 * 16 15 14 19 19 C 1.40735 * 119.81324 * 359.74797 * 18 16 15 20 20 C 1.41056 * 120.29383 * 179.97438 * 19 18 16 21 21 H 1.07997 * 120.00422 * 158.86437 * 20 19 18 22 22 C 1.39960 * 119.99812 * 338.86373 * 20 19 18 23 23 N 1.30853 * 119.99803 * 327.77749 * 22 20 19 24 24 Si 1.86797 * 119.99826 * 147.77912 * 22 20 19 25 25 H 1.48500 * 109.47134 * 84.99109 * 24 22 20 26 26 H 1.48500 * 109.47125 * 204.98894 * 24 22 20 27 27 H 1.48504 * 109.47400 * 324.99163 * 24 22 20 28 28 C 1.34264 * 125.75248 * 120.00356 * 6 3 2 29 29 C 1.50697 * 126.29643 * 359.95776 * 28 6 3 30 30 H 1.08995 * 109.47374 * 299.99558 * 1 2 3 31 31 H 1.09004 * 109.47042 * 59.99870 * 1 2 3 32 32 H 1.09005 * 109.46831 * 179.97438 * 1 2 3 33 33 H 1.09000 * 109.47065 * 240.00107 * 2 1 3 34 34 H 1.09004 * 109.47042 * 120.00130 * 2 1 3 35 35 H 1.08998 * 109.47547 * 305.00368 * 3 2 1 36 36 H 1.09006 * 109.46882 * 305.00387 * 4 3 2 37 37 H 1.09008 * 109.47043 * 64.99792 * 4 3 2 38 38 H 1.09002 * 109.46992 * 300.00441 * 5 4 3 39 39 H 1.08999 * 109.46906 * 59.99628 * 5 4 3 40 40 H 1.08996 * 109.47121 * 180.02562 * 5 4 3 41 41 H 1.08007 * 125.98247 * 180.22611 * 8 7 6 42 42 H 0.97007 * 120.00265 * 3.67188 * 12 10 9 43 43 H 1.08006 * 119.91002 * 359.96470 * 14 13 12 44 44 H 1.08003 * 119.69712 * 179.72758 * 15 14 13 45 45 H 1.08001 * 120.09026 * 179.76613 * 18 16 15 46 46 H 0.96997 * 119.99446 * 180.02562 * 23 22 20 47 47 H 1.09004 * 109.47198 * 270.00343 * 29 28 6 48 48 H 1.09007 * 109.46910 * 29.99711 * 29 28 6 49 49 H 1.08994 * 109.47535 * 150.00271 * 29 28 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 1.6352 2.1265 1.3074 5 6 2.0353 3.6024 1.2561 6 7 3.5000 1.4442 -0.1203 7 7 4.3950 0.8495 0.7761 8 6 5.6124 1.0451 0.3501 9 6 5.5419 1.7911 -0.8478 10 6 6.6816 2.2385 -1.6684 11 8 6.4854 2.8733 -2.6870 12 7 7.9411 1.9442 -1.2899 13 6 9.0188 2.4308 -2.0218 14 6 8.8771 2.7057 -3.3732 15 6 9.9498 3.1847 -4.1006 16 6 11.1777 3.4067 -3.4880 17 17 12.5094 4.0153 -4.4207 18 6 11.3459 3.1423 -2.1487 19 6 10.2667 2.6489 -1.3920 20 6 10.4280 2.3739 -0.0180 21 1 9.5643 2.3295 0.6289 22 6 11.7073 2.1584 0.5071 23 7 12.6311 1.5970 -0.2303 24 14 12.0960 2.6722 2.2604 25 1 11.6858 1.5935 3.1948 26 1 13.5551 2.9140 2.3935 27 1 11.3561 3.9177 2.5869 28 6 4.2050 2.0172 -1.1089 29 6 3.6410 2.7685 -2.2872 30 1 -0.3634 0.5137 0.8900 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3633 -1.0277 -0.0005 33 1 1.8933 -0.5138 -0.8900 34 1 1.8933 -0.5139 0.8900 35 1 1.6054 1.9816 -0.8417 36 1 0.5562 2.0469 1.4401 37 1 2.1407 1.6419 2.1427 38 1 3.1143 3.6819 1.1233 39 1 1.5299 4.0870 0.4208 40 1 1.7473 4.0895 2.1876 41 1 6.5160 0.6999 0.8306 42 1 8.0960 1.3929 -0.5069 43 1 7.9270 2.5410 -3.8596 44 1 9.8321 3.3921 -5.1540 45 1 12.3033 3.3132 -1.6791 46 1 13.5176 1.4474 0.1337 47 1 3.4623 2.0748 -3.1088 48 1 2.7017 3.2417 -2.0006 49 1 4.3507 3.5324 -2.6046 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000408522624.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:22:38 Heat of formation + Delta-G solvation = 31.308833 kcal Electronic energy + Delta-G solvation = -31636.151541 eV Core-core repulsion = 27396.630152 eV Total energy + Delta-G solvation = -4239.521390 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 375.145 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -41.51262 -39.30097 -37.36788 -36.89151 -35.41864 -33.88493 -33.60135 -32.52192 -32.13168 -31.07848 -29.87202 -28.54447 -27.02528 -26.46903 -25.33703 -23.23462 -22.71977 -22.30959 -21.50011 -20.37214 -19.43088 -19.05891 -17.56701 -17.27657 -16.60878 -15.88960 -15.61498 -15.35046 -15.12110 -14.70517 -14.55397 -14.32867 -14.25989 -13.93156 -13.61582 -13.31706 -13.09114 -12.93372 -12.86251 -12.78478 -12.56001 -12.47920 -12.30755 -12.11774 -12.06847 -11.87710 -11.82497 -11.52751 -11.42981 -11.21771 -11.20143 -11.00783 -10.85999 -10.67300 -10.50239 -10.36914 -10.29980 -9.69074 -9.33541 -9.15416 -9.13915 -8.70828 -8.47255 -7.67262 -7.14519 -6.77660 -4.45315 1.62691 2.27026 2.28292 2.64377 2.81652 2.99604 3.01091 3.16145 3.36836 3.79342 3.91744 3.99728 4.17055 4.38021 4.39312 4.48291 4.58252 4.75037 4.82841 4.95097 4.97830 5.04976 5.10437 5.28451 5.33876 5.41241 5.47075 5.52597 5.53215 5.59554 5.65226 5.67854 5.80152 5.84155 5.91170 6.00138 6.13886 6.37459 6.43650 6.54276 6.78985 6.88493 6.91329 6.99072 7.09573 7.34768 7.55947 7.64172 7.75262 7.82897 7.97969 8.29881 8.39572 8.65153 8.71027 9.04587 9.89558 Molecular weight = 375.15amu Principal moments of inertia in cm(-1) A = 0.010891 B = 0.002427 C = 0.002093 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2570.287944 B =11533.338338 C =13373.592194 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.132 4.132 3 C 0.159 3.841 4 C -0.134 4.134 5 C -0.155 4.155 6 N -0.355 5.355 7 N -0.297 5.297 8 C 0.081 3.919 9 C -0.285 4.285 10 C 0.579 3.421 11 O -0.548 6.548 12 N -0.631 5.631 13 C 0.018 3.982 14 C -0.078 4.078 15 C -0.230 4.230 16 C -0.005 4.005 17 Cl -0.128 7.128 18 C -0.163 4.163 19 C 0.113 3.887 20 C -0.468 4.468 21 H 0.083 0.917 22 C 0.090 3.910 23 N -0.759 5.759 24 Si 0.896 3.104 25 H -0.266 1.266 26 H -0.274 1.274 27 H -0.257 1.257 28 C 0.151 3.849 29 C -0.098 4.098 30 H 0.061 0.939 31 H 0.057 0.943 32 H 0.061 0.939 33 H 0.068 0.932 34 H 0.078 0.922 35 H 0.102 0.898 36 H 0.082 0.918 37 H 0.079 0.921 38 H 0.056 0.944 39 H 0.054 0.946 40 H 0.059 0.941 41 H 0.189 0.811 42 H 0.403 0.597 43 H 0.131 0.869 44 H 0.100 0.900 45 H 0.120 0.880 46 H 0.287 0.713 47 H 0.083 0.917 48 H 0.064 0.936 49 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.150 -1.724 3.297 19.508 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.170 4.170 3 C 0.058 3.942 4 C -0.172 4.172 5 C -0.212 4.212 6 N -0.135 5.135 7 N -0.116 5.116 8 C -0.107 4.107 9 C -0.300 4.300 10 C 0.368 3.632 11 O -0.428 6.428 12 N -0.271 5.271 13 C -0.077 4.077 14 C -0.098 4.098 15 C -0.250 4.250 16 C -0.032 4.032 17 Cl -0.099 7.099 18 C -0.184 4.184 19 C 0.109 3.891 20 C -0.495 4.495 21 H 0.101 0.899 22 C -0.134 4.134 23 N -0.381 5.381 24 Si 0.720 3.280 25 H -0.191 1.191 26 H -0.199 1.199 27 H -0.181 1.181 28 C 0.019 3.981 29 C -0.156 4.156 30 H 0.080 0.920 31 H 0.076 0.924 32 H 0.080 0.920 33 H 0.087 0.913 34 H 0.097 0.903 35 H 0.120 0.880 36 H 0.101 0.899 37 H 0.098 0.902 38 H 0.075 0.925 39 H 0.073 0.927 40 H 0.078 0.922 41 H 0.206 0.794 42 H 0.239 0.761 43 H 0.149 0.851 44 H 0.119 0.881 45 H 0.137 0.863 46 H 0.098 0.902 47 H 0.102 0.898 48 H 0.083 0.917 49 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -19.819 -1.873 3.468 20.208 hybrid contribution 1.219 0.252 0.605 1.384 sum -18.600 -1.622 4.074 19.110 Atomic orbital electron populations 1.21811 0.94413 1.02487 1.02203 1.21842 0.96404 0.94874 1.03856 1.21515 0.74418 0.98084 1.00219 1.21950 1.01927 0.96362 0.96918 1.21782 1.02135 0.95371 1.01930 1.48539 1.06251 1.41193 1.17563 1.77075 0.99147 1.20451 1.14901 1.24075 0.96097 0.96360 0.94152 1.20082 0.92861 1.15096 1.01945 1.17195 0.81972 0.79482 0.84590 1.90618 1.84913 1.41827 1.25478 1.42621 1.03977 1.50176 1.30330 1.17645 0.88655 1.10861 0.90501 1.20859 0.98092 0.98749 0.92100 1.20108 0.92066 1.14052 0.98806 1.20713 0.87296 1.03003 0.92151 1.98250 1.49629 1.87321 1.74747 1.20735 1.00177 1.06342 0.91118 1.17161 0.89238 0.90048 0.92696 1.19234 0.93353 1.43683 0.93241 0.89864 1.25909 0.95844 0.91488 1.00144 1.69910 1.04736 1.24573 1.38892 0.86509 0.78568 0.80768 0.82192 1.19140 1.19917 1.18115 1.21435 0.91003 0.94324 0.91334 1.20673 1.01417 1.00556 0.92990 0.92022 0.92412 0.91960 0.91291 0.90309 0.88031 0.89922 0.90245 0.92470 0.92666 0.92199 0.79436 0.76141 0.85127 0.88143 0.86253 0.90202 0.89831 0.91679 0.87257 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.79 9.67 37.16 0.36 -0.43 16 2 C -0.13 -1.00 5.65 -26.73 -0.15 -1.16 16 3 C 0.16 1.35 2.48 -67.93 -0.17 1.18 16 4 C -0.13 -1.03 5.40 -26.73 -0.14 -1.18 16 5 C -0.15 -1.31 9.80 37.16 0.36 -0.94 16 6 N -0.36 -4.24 2.70 -50.16 -0.14 -4.37 16 7 N -0.30 -4.07 12.33 30.86 0.38 -3.69 16 8 C 0.08 1.14 11.50 -16.98 -0.20 0.95 16 9 C -0.29 -4.49 6.13 -105.07 -0.64 -5.13 16 10 C 0.58 10.99 7.68 -12.53 -0.10 10.89 16 11 O -0.55 -11.47 11.84 5.27 0.06 -11.41 16 12 N -0.63 -12.59 5.03 -10.46 -0.05 -12.64 16 13 C 0.02 0.41 6.45 -83.21 -0.54 -0.13 16 14 C -0.08 -1.81 8.74 -39.46 -0.34 -2.16 16 15 C -0.23 -5.30 9.82 -39.32 -0.39 -5.69 16 16 C -0.01 -0.12 6.31 -39.55 -0.25 -0.37 16 17 Cl -0.13 -2.66 28.94 -51.86 -1.50 -4.16 16 18 C -0.16 -4.09 8.55 -38.89 -0.33 -4.43 16 19 C 0.11 2.80 5.59 -106.65 -0.60 2.21 16 20 C -0.47 -11.12 8.38 -37.87 -0.32 -11.44 16 21 H 0.08 1.85 7.12 -52.49 -0.37 1.47 16 22 C 0.09 2.06 4.79 -17.32 -0.08 1.97 16 23 N -0.76 -18.18 11.71 55.55 0.65 -17.53 16 24 Si 0.90 17.20 29.66 -169.99 -5.04 12.16 16 25 H -0.27 -4.98 7.11 56.52 0.40 -4.58 16 26 H -0.27 -5.23 7.11 56.52 0.40 -4.82 16 27 H -0.26 -5.03 7.11 56.52 0.40 -4.62 16 28 C 0.15 2.03 7.01 -81.59 -0.57 1.46 16 29 C -0.10 -1.10 9.40 36.00 0.34 -0.76 16 30 H 0.06 0.28 6.46 -51.93 -0.34 -0.06 16 31 H 0.06 0.26 8.14 -51.93 -0.42 -0.16 16 32 H 0.06 0.31 8.14 -51.93 -0.42 -0.12 16 33 H 0.07 0.59 8.14 -51.93 -0.42 0.17 16 34 H 0.08 0.69 8.14 -51.93 -0.42 0.27 16 35 H 0.10 0.71 6.63 -51.93 -0.34 0.36 16 36 H 0.08 0.46 6.34 -51.93 -0.33 0.13 16 37 H 0.08 0.74 8.14 -51.92 -0.42 0.32 16 38 H 0.06 0.64 7.75 -51.93 -0.40 0.23 16 39 H 0.05 0.40 8.14 -51.93 -0.42 -0.02 16 40 H 0.06 0.46 8.14 -51.93 -0.42 0.03 16 41 H 0.19 2.25 7.51 -52.48 -0.39 1.86 16 42 H 0.40 7.26 6.50 -40.82 -0.27 6.99 16 43 H 0.13 3.00 5.65 -52.48 -0.30 2.70 16 44 H 0.10 2.13 8.06 -52.48 -0.42 1.71 16 45 H 0.12 3.08 6.47 -52.49 -0.34 2.74 16 46 H 0.29 6.25 8.30 -40.82 -0.34 5.91 16 47 H 0.08 0.86 8.14 -51.93 -0.42 0.43 16 48 H 0.06 0.54 7.07 -51.93 -0.37 0.17 16 49 H 0.11 1.47 6.50 -51.93 -0.34 1.14 16 LS Contribution 412.40 15.07 6.21 6.21 Total: -1.00 -28.41 412.40 -9.90 -38.32 By element: Atomic # 1 Polarization: 18.98 SS G_CDS: -6.72 Total: 12.25 kcal Atomic # 6 Polarization: -11.38 SS G_CDS: -3.76 Total: -15.14 kcal Atomic # 7 Polarization: -39.08 SS G_CDS: 0.84 Total: -38.24 kcal Atomic # 8 Polarization: -11.47 SS G_CDS: 0.06 Total: -11.41 kcal Atomic # 14 Polarization: 17.20 SS G_CDS: -5.04 Total: 12.16 kcal Atomic # 17 Polarization: -2.66 SS G_CDS: -1.50 Total: -4.16 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -28.41 -9.90 -38.32 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000408522624.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.625 kcal (2) G-P(sol) polarization free energy of solvation -28.414 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 41.212 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.903 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.316 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.309 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds