Wall clock time and date at job start Tue Mar 31 2020 06:45:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.47198 * 179.97438 * 2 1 4 4 C 1.53001 * 109.47000 * 108.80268 * 3 2 1 5 5 N 1.46499 * 109.47147 * 179.97438 * 4 3 2 6 6 C 1.46506 * 119.99936 * 89.99619 * 5 4 3 7 7 C 1.50703 * 109.46877 * 90.00092 * 6 5 4 8 8 H 1.08005 * 119.99817 * 0.02562 * 7 6 5 9 9 C 1.37871 * 120.00081 * 179.97438 * 7 6 5 10 10 N 1.31520 * 119.99848 * 0.02562 * 9 7 6 11 11 Si 1.86798 * 120.00321 * 179.97438 * 9 7 6 12 12 H 1.48504 * 109.46938 * 0.02562 * 11 9 7 13 13 H 1.48501 * 109.47198 * 120.00527 * 11 9 7 14 14 H 1.48498 * 109.47360 * 240.00281 * 11 9 7 15 15 C 1.34773 * 120.00036 * 270.27655 * 5 4 3 16 16 O 1.21281 * 120.00220 * 179.72597 * 15 5 4 17 17 C 1.50706 * 120.00080 * 359.72107 * 15 5 4 18 18 N 1.46889 * 109.47109 * 180.02562 * 17 15 5 19 19 C 1.46959 * 111.00102 * 293.79785 * 18 17 15 20 20 C 1.53049 * 109.36362 * 176.81680 * 19 18 17 21 21 N 1.46955 * 109.36833 * 58.40206 * 20 19 18 22 22 C 1.38572 * 111.00047 * 176.80889 * 21 20 19 23 23 C 1.39470 * 120.51500 * 303.52242 * 22 21 20 24 24 C 1.38471 * 118.30683 * 179.75993 * 23 22 21 25 25 F 1.35103 * 120.42657 * 180.26265 * 24 23 22 26 26 N 1.32786 * 119.14004 * 0.51475 * 24 23 22 27 27 C 1.31757 * 120.96404 * 359.74070 * 26 24 23 28 28 N 1.31759 * 121.86145 * 359.97438 * 27 26 24 29 29 C 1.46955 * 110.87907 * 300.67589 * 21 20 19 30 30 C 1.46965 * 110.99870 * 170.00198 * 18 17 15 31 31 H 1.09003 * 109.47447 * 348.79961 * 3 2 1 32 32 H 1.08997 * 109.47023 * 228.80317 * 3 2 1 33 33 H 1.08994 * 109.47531 * 59.99578 * 4 3 2 34 34 H 1.09005 * 109.46544 * 299.99513 * 4 3 2 35 35 H 1.09000 * 109.46803 * 209.99571 * 6 5 4 36 36 H 1.09000 * 109.47214 * 330.00364 * 6 5 4 37 37 H 0.96998 * 119.99944 * 179.97438 * 10 9 7 38 38 H 1.09004 * 109.46762 * 300.00389 * 17 15 5 39 39 H 1.08998 * 109.46924 * 59.99727 * 17 15 5 40 40 H 1.09007 * 109.48694 * 296.78149 * 19 18 17 41 41 H 1.09001 * 109.48949 * 56.84570 * 19 18 17 42 42 H 1.09002 * 109.48821 * 298.42916 * 20 19 18 43 43 H 1.09009 * 109.50251 * 178.38247 * 20 19 18 44 44 H 1.07994 * 120.84317 * 0.02562 * 23 22 21 45 45 H 1.08002 * 119.07040 * 179.97438 * 27 26 24 46 46 H 1.08990 * 109.49170 * 299.35491 * 29 21 20 47 47 H 1.08995 * 109.50433 * 179.29789 * 29 21 20 48 48 H 1.08995 * 109.48409 * 303.15092 * 30 18 17 49 49 H 1.08997 * 109.48809 * 63.21611 * 30 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1178 0.4658 -1.3655 5 7 4.5827 0.4671 -1.3654 6 6 5.3163 -0.7335 -1.7740 7 6 5.5676 -0.6874 -3.2592 8 1 5.2164 0.1524 -3.8405 9 6 6.2468 -1.7167 -3.8757 10 7 6.6749 -2.7391 -3.1677 11 14 6.5576 -1.6600 -5.7168 12 1 5.9787 -0.4131 -6.2783 13 1 8.0202 -1.6853 -5.9729 14 1 5.9217 -2.8362 -6.3627 15 6 5.2556 1.5708 -0.9839 16 8 6.4684 1.5702 -0.9790 17 6 4.5010 2.8057 -0.5636 18 7 5.4546 3.8615 -0.1981 19 6 6.2131 3.4925 1.0054 20 6 7.2478 4.5794 1.3062 21 7 6.5629 5.8661 1.4928 22 6 7.4624 6.8621 1.8377 23 6 8.2829 6.7190 2.9565 24 6 9.1687 7.7402 3.2561 25 9 9.9870 7.6439 4.3268 26 7 9.1997 8.8176 2.4805 27 6 8.4064 8.9224 1.4338 28 7 7.5532 7.9721 1.1098 29 6 5.8045 6.2351 0.2893 30 6 4.7697 5.1483 -0.0115 31 1 2.9718 -1.0073 0.1996 32 1 2.9710 0.6777 0.7733 33 1 2.7540 1.4737 -1.5652 34 1 2.7547 -0.2114 -2.1387 35 1 6.2687 -0.7747 -1.2455 36 1 4.7280 -1.6186 -1.5323 37 1 7.1524 -3.4634 -3.6015 38 1 3.8779 3.1493 -1.3893 39 1 3.8707 2.5719 0.2944 40 1 5.5307 3.3964 1.8500 41 1 6.7212 2.5429 0.8381 42 1 7.9466 4.6567 0.4732 43 1 7.7922 4.3221 2.2149 44 1 8.2316 5.8323 3.5708 45 1 8.4570 9.8124 0.8241 46 1 6.4868 6.3313 -0.5552 47 1 5.2964 7.1848 0.4563 48 1 4.2257 5.4057 -0.9202 49 1 4.0709 5.0709 0.8215 RHF calculation, no. of doubly occupied orbitals= 70 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000408522765.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:45:54 Heat of formation + Delta-G solvation = 37.821166 kcal Electronic energy + Delta-G solvation = -33909.256638 eV Core-core repulsion = 29208.548109 eV Total energy + Delta-G solvation = -4700.708529 eV No. of doubly occupied orbitals = 70 Molecular weight (most abundant/longest-lived isotopes) = 376.176 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -49.56576 -41.62748 -39.93425 -38.85524 -36.95962 -36.07885 -35.19382 -33.32186 -32.93115 -32.04693 -31.16098 -30.88694 -29.23715 -27.25816 -25.34108 -25.24195 -24.06785 -23.51863 -23.30396 -22.36114 -20.30469 -18.87849 -18.59334 -18.55363 -17.67663 -16.78577 -16.71926 -16.53858 -16.48659 -16.05493 -15.79806 -15.52567 -15.35708 -15.32377 -14.78985 -14.76581 -14.62286 -14.39302 -14.26393 -14.05969 -14.00204 -13.68050 -13.38080 -13.05811 -12.54970 -12.50093 -12.47853 -12.07781 -11.96639 -11.83054 -11.55326 -11.48396 -11.36761 -11.27495 -11.18899 -11.03120 -10.97379 -10.87304 -10.67042 -10.26525 -10.22032 -9.93774 -9.71808 -9.10711 -8.96766 -8.51123 -8.37580 -7.88871 -6.12684 -4.17050 0.37373 0.50188 2.66524 2.74088 2.74965 2.97525 3.20532 3.25103 3.25777 3.34466 3.36080 3.40524 3.65519 3.80866 4.14576 4.17491 4.39071 4.48926 4.55179 4.65505 4.75534 4.88237 4.91453 4.97435 5.03527 5.08323 5.11012 5.14174 5.20726 5.22974 5.27576 5.37689 5.44824 5.55942 5.59816 5.71753 5.75880 5.80747 5.89751 6.00484 6.04857 6.47200 6.53283 6.71492 6.89769 6.96161 7.29799 7.38254 7.51302 7.54644 7.83780 8.13057 8.19922 8.80062 8.94367 9.48888 10.95467 Molecular weight = 376.18amu Principal moments of inertia in cm(-1) A = 0.009330 B = 0.002071 C = 0.001830 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3000.216943 B =13519.981066 C =15293.676394 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.444 5.444 2 C 0.216 3.784 3 C -0.050 4.050 4 C 0.117 3.883 5 N -0.598 5.598 6 C 0.246 3.754 7 C -0.527 4.527 8 H 0.059 0.941 9 C 0.062 3.938 10 N -0.894 5.894 11 Si 0.896 3.104 12 H -0.273 1.273 13 H -0.283 1.283 14 H -0.284 1.284 15 C 0.509 3.491 16 O -0.516 6.516 17 C 0.034 3.966 18 N -0.521 5.521 19 C 0.052 3.948 20 C 0.065 3.935 21 N -0.474 5.474 22 C 0.390 3.610 23 C -0.269 4.269 24 C 0.372 3.628 25 F -0.100 7.100 26 N -0.575 5.575 27 C 0.361 3.639 28 N -0.561 5.561 29 C 0.069 3.931 30 C 0.053 3.947 31 H 0.118 0.882 32 H 0.104 0.896 33 H 0.074 0.926 34 H 0.095 0.905 35 H 0.046 0.954 36 H 0.034 0.966 37 H 0.263 0.737 38 H 0.102 0.898 39 H 0.059 0.941 40 H 0.040 0.960 41 H 0.114 0.886 42 H 0.067 0.933 43 H 0.091 0.909 44 H 0.160 0.840 45 H 0.209 0.791 46 H 0.068 0.932 47 H 0.093 0.907 48 H 0.089 0.911 49 H 0.043 0.957 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.958 18.092 12.070 21.837 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.122 5.122 2 C -0.102 4.102 3 C -0.092 4.092 4 C -0.009 4.009 5 N -0.330 5.330 6 C 0.127 3.873 7 C -0.566 4.566 8 H 0.077 0.923 9 C -0.140 4.140 10 N -0.533 5.533 11 Si 0.724 3.276 12 H -0.198 1.198 13 H -0.209 1.209 14 H -0.210 1.210 15 C 0.294 3.706 16 O -0.391 6.391 17 C -0.097 4.097 18 N -0.246 5.246 19 C -0.076 4.076 20 C -0.061 4.061 21 N -0.191 5.191 22 C 0.150 3.850 23 C -0.296 4.296 24 C 0.213 3.787 25 F -0.079 7.079 26 N -0.298 5.298 27 C 0.071 3.929 28 N -0.283 5.283 29 C -0.057 4.057 30 C -0.076 4.076 31 H 0.136 0.864 32 H 0.122 0.878 33 H 0.092 0.908 34 H 0.113 0.887 35 H 0.064 0.936 36 H 0.052 0.948 37 H 0.073 0.927 38 H 0.120 0.880 39 H 0.077 0.923 40 H 0.059 0.941 41 H 0.132 0.868 42 H 0.085 0.915 43 H 0.109 0.891 44 H 0.178 0.822 45 H 0.225 0.775 46 H 0.087 0.913 47 H 0.111 0.889 48 H 0.107 0.893 49 H 0.062 0.938 Dipole moment (debyes) X Y Z Total from point charges -2.857 18.575 11.529 22.048 hybrid contribution 0.541 -0.775 -0.121 0.953 sum -2.316 17.801 11.407 21.268 Atomic orbital electron populations 1.81218 1.13050 1.09245 1.08656 1.29101 0.95101 0.92886 0.93106 1.19901 0.81366 1.06294 1.01600 1.21301 0.82327 1.02520 0.94761 1.48231 1.04771 1.15133 1.64893 1.19346 0.92529 0.79871 0.95538 1.21442 1.36524 1.05649 0.92939 0.92311 1.24913 0.95312 0.95298 0.98475 1.69925 1.38307 1.09309 1.35750 0.86471 0.78120 0.77889 0.85117 1.19771 1.20900 1.21012 1.20147 0.88253 0.83784 0.78372 1.90656 1.13569 1.82334 1.52542 1.22111 0.94240 0.91917 1.01384 1.61783 1.25772 1.01677 1.35415 1.22398 0.95768 0.99234 0.90177 1.22447 0.96267 0.85079 1.02260 1.59040 1.21542 1.02402 1.36089 1.19946 0.86010 0.90384 0.88702 1.22039 1.01608 1.03400 1.02520 1.18100 0.86758 0.90046 0.83844 1.91680 1.69906 1.95449 1.50835 1.67864 1.28470 1.24979 1.08524 1.24680 0.83838 0.95810 0.88521 1.68481 1.24602 1.03712 1.31491 1.22159 0.95928 0.98230 0.89399 1.22289 0.95198 0.88892 1.01172 0.86445 0.87789 0.90751 0.88664 0.93569 0.94772 0.92725 0.88039 0.92284 0.94146 0.86775 0.91502 0.89120 0.82207 0.77517 0.91339 0.88911 0.89292 0.93845 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -6.19 18.54 42.15 0.78 -5.40 16 2 C 0.22 2.41 15.43 -20.76 -0.32 2.09 16 3 C -0.05 -0.46 6.02 -29.52 -0.18 -0.64 16 4 C 0.12 1.41 5.16 -4.04 -0.02 1.39 16 5 N -0.60 -10.02 2.46 -175.05 -0.43 -10.45 16 6 C 0.25 5.51 5.17 -5.19 -0.03 5.49 16 7 C -0.53 -13.59 9.39 -34.44 -0.32 -13.91 16 8 H 0.06 1.53 7.81 -52.48 -0.41 1.12 16 9 C 0.06 1.67 5.46 -17.82 -0.10 1.57 16 10 N -0.89 -24.94 13.29 55.43 0.74 -24.20 16 11 Si 0.90 20.86 29.54 -169.99 -5.02 15.84 16 12 H -0.27 -6.29 7.11 56.52 0.40 -5.89 16 13 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 14 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 15 C 0.51 8.43 7.37 -10.98 -0.08 8.35 16 16 O -0.52 -10.85 13.91 5.56 0.08 -10.77 16 17 C 0.03 0.40 4.00 -4.98 -0.02 0.38 16 18 N -0.52 -6.10 4.45 -235.90 -1.05 -7.15 16 19 C 0.05 0.58 5.26 -3.77 -0.02 0.56 16 20 C 0.06 0.64 5.38 -3.77 -0.02 0.62 16 21 N -0.47 -4.53 4.73 -172.89 -0.82 -5.35 16 22 C 0.39 3.81 6.40 -154.76 -0.99 2.82 16 23 C -0.27 -2.39 9.29 -39.04 -0.36 -2.76 16 24 C 0.37 3.67 8.50 -17.05 -0.14 3.53 16 25 F -0.10 -0.99 17.30 2.25 0.04 -0.95 16 26 N -0.58 -5.82 10.45 -14.98 -0.16 -5.98 16 27 C 0.36 3.02 12.28 -92.22 -1.13 1.89 16 28 N -0.56 -5.41 8.87 -13.84 -0.12 -5.53 16 29 C 0.07 0.64 4.80 -3.77 -0.02 0.62 16 30 C 0.05 0.48 5.61 -3.76 -0.02 0.45 16 31 H 0.12 1.09 8.14 -51.93 -0.42 0.67 16 32 H 0.10 0.75 7.20 -51.93 -0.37 0.38 16 33 H 0.07 0.72 6.45 -51.93 -0.33 0.38 16 34 H 0.09 1.25 8.07 -51.93 -0.42 0.83 16 35 H 0.05 1.19 7.41 -51.93 -0.38 0.80 16 36 H 0.03 0.76 8.07 -51.93 -0.42 0.35 16 37 H 0.26 6.99 8.31 -40.82 -0.34 6.65 16 38 H 0.10 1.03 7.29 -51.93 -0.38 0.65 16 39 H 0.06 0.53 7.14 -51.93 -0.37 0.16 16 40 H 0.04 0.40 8.14 -51.92 -0.42 -0.02 16 41 H 0.11 1.57 5.85 -51.93 -0.30 1.27 16 42 H 0.07 0.78 8.14 -51.93 -0.42 0.35 16 43 H 0.09 0.73 6.87 -51.92 -0.36 0.37 16 44 H 0.16 1.12 7.27 -52.49 -0.38 0.74 16 45 H 0.21 0.96 8.06 -52.49 -0.42 0.54 16 46 H 0.07 0.73 8.06 -51.93 -0.42 0.32 16 47 H 0.09 0.80 7.84 -51.93 -0.41 0.39 16 48 H 0.09 0.70 8.07 -51.93 -0.42 0.28 16 49 H 0.04 0.37 8.14 -51.93 -0.42 -0.06 16 LS Contribution 412.74 15.07 6.22 6.22 Total: -1.00 -33.20 412.74 -10.15 -43.35 By element: Atomic # 1 Polarization: 4.56 SS G_CDS: -6.63 Total: -2.07 kcal Atomic # 6 Polarization: 16.22 SS G_CDS: -3.78 Total: 12.44 kcal Atomic # 7 Polarization: -63.00 SS G_CDS: -1.06 Total: -64.06 kcal Atomic # 8 Polarization: -10.85 SS G_CDS: 0.08 Total: -10.77 kcal Atomic # 9 Polarization: -0.99 SS G_CDS: 0.04 Total: -0.95 kcal Atomic # 14 Polarization: 20.86 SS G_CDS: -5.02 Total: 15.84 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -33.20 -10.15 -43.35 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000408522765.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.174 kcal (2) G-P(sol) polarization free energy of solvation -33.204 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.970 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.149 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.353 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.821 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds