Wall clock time and date at job start Tue Mar 31 2020 05:30:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13595 * 1 3 3 C 1.43199 * 179.97438 * 2 1 4 4 C 1.39803 * 120.09269 * 47.72222 * 3 2 1 5 5 C 1.37652 * 119.93297 * 180.02562 * 4 3 2 6 6 C 1.39160 * 120.11511 * 0.02562 * 5 4 3 7 7 N 1.39545 * 119.91045 * 179.97438 * 6 5 4 8 8 C 1.34777 * 119.99726 * 144.20653 * 7 6 5 9 9 O 1.21278 * 120.00250 * 4.55930 * 8 7 6 10 10 C 1.50703 * 119.99413 * 184.56026 * 8 7 6 11 11 N 1.46904 * 109.46900 * 174.49355 * 10 8 7 12 12 C 1.46896 * 111.00068 * 287.15975 * 11 10 8 13 13 C 1.50703 * 109.47382 * 170.00075 * 12 11 10 14 14 H 1.08000 * 119.99478 * 359.97438 * 13 12 11 15 15 C 1.37871 * 120.00004 * 179.97438 * 13 12 11 16 16 N 1.31509 * 120.00221 * 359.97438 * 15 13 12 17 17 Si 1.86802 * 119.99932 * 179.97438 * 15 13 12 18 18 H 1.48504 * 109.47155 * 359.97438 * 17 15 13 19 19 H 1.48498 * 109.47336 * 119.99525 * 17 15 13 20 20 H 1.48498 * 109.47153 * 240.00188 * 17 15 13 21 21 C 1.46895 * 111.00116 * 163.20236 * 11 10 8 22 22 C 1.53178 * 109.54539 * 51.83986 * 21 11 10 23 23 C 1.53094 * 109.16751 * 183.15200 * 22 21 11 24 24 O 1.42903 * 109.40908 * 57.60874 * 23 22 21 25 25 C 1.42902 * 114.10304 * 298.83899 * 24 23 22 26 26 C 1.53093 * 109.40949 * 61.16367 * 25 24 23 27 27 C 1.39026 * 120.17589 * 0.25043 * 6 5 4 28 28 C 1.37878 * 120.06965 * 359.45196 * 27 6 5 29 29 Cl 1.73600 * 120.05647 * 180.24801 * 28 27 6 30 30 H 1.07999 * 120.03935 * 359.97438 * 4 3 2 31 31 H 1.08005 * 119.94766 * 179.97438 * 5 4 3 32 32 H 0.96999 * 120.00111 * 324.20392 * 7 6 5 33 33 H 1.08996 * 109.47283 * 294.49296 * 10 8 7 34 34 H 1.08994 * 109.47514 * 54.49305 * 10 8 7 35 35 H 1.09001 * 109.46989 * 289.99917 * 12 11 10 36 36 H 1.09000 * 109.47550 * 49.99706 * 12 11 10 37 37 H 0.97002 * 120.00409 * 179.97438 * 16 15 13 38 38 H 1.08998 * 109.54840 * 172.11128 * 21 11 10 39 39 H 1.09002 * 109.52344 * 303.06128 * 22 21 11 40 40 H 1.09002 * 109.52110 * 63.24786 * 22 21 11 41 41 H 1.08993 * 109.47809 * 297.63212 * 23 22 21 42 42 H 1.08994 * 109.48071 * 177.58850 * 23 22 21 43 43 H 1.08998 * 109.47930 * 301.18615 * 25 24 23 44 44 H 1.09002 * 109.49103 * 181.14732 * 25 24 23 45 45 H 1.09007 * 109.52106 * 182.48599 * 26 25 24 46 46 H 1.09001 * 109.52593 * 62.29910 * 26 25 24 47 47 H 1.08002 * 119.96014 * 179.70896 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5679 0.0006 0.0000 4 6 3.2693 -0.8128 -0.8950 5 6 4.6458 -0.8100 -0.8918 6 6 5.3403 0.0007 0.0010 7 7 6.7357 -0.0003 0.0010 8 6 7.4103 1.1412 0.2427 9 8 6.8075 2.1502 0.5416 10 6 8.9138 1.1637 0.1415 11 7 9.3960 2.5399 0.3190 12 6 9.0977 3.3589 -0.8634 13 6 9.3796 4.8070 -0.5556 14 1 9.7435 5.0905 0.4209 15 6 9.1729 5.7698 -1.5206 16 7 8.7301 5.4244 -2.7098 17 14 9.5216 7.5648 -1.1389 18 1 10.0068 7.6884 0.2592 19 1 10.5589 8.0765 -2.0703 20 1 8.2760 8.3566 -1.3018 21 6 10.8328 2.5591 0.6239 22 6 11.5899 1.7362 -0.4231 23 6 13.0750 1.6965 -0.0534 24 8 13.2237 1.1457 1.2568 25 6 12.5764 1.8997 2.2837 26 6 11.0713 1.9475 2.0079 27 6 4.6476 0.8071 0.8969 28 6 3.2688 0.8147 0.8960 29 17 2.4042 1.8267 2.0105 30 1 2.7317 -1.4434 -1.5876 31 1 5.1878 -1.4386 -1.5828 32 1 7.2202 -0.8224 -0.1730 33 1 9.3397 0.5267 0.9166 34 1 9.2176 0.7959 -0.8385 35 1 9.7226 3.0361 -1.6960 36 1 8.0474 3.2421 -1.1308 37 1 8.5843 6.1018 -3.3887 38 1 11.1944 3.5873 0.6125 39 1 11.1928 0.7213 -0.4454 40 1 11.4708 2.1966 -1.4039 41 1 13.4810 2.7079 -0.0708 42 1 13.6118 1.0766 -0.7714 43 1 12.9759 2.9137 2.2968 44 1 12.7541 1.4263 3.2494 45 1 10.5814 2.5590 2.7657 46 1 10.6637 0.9369 2.0347 47 1 5.1901 1.4313 1.5915 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000069975600.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:30:21 Heat of formation + Delta-G solvation = -15.726095 kcal Electronic energy + Delta-G solvation = -31909.612803 eV Core-core repulsion = 27504.907252 eV Total energy + Delta-G solvation = -4404.705550 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 377.129 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -40.76299 -39.59260 -38.78990 -36.88787 -36.65456 -36.26193 -34.66444 -32.78371 -31.52892 -31.19105 -30.89406 -30.46102 -28.23575 -25.98444 -24.13859 -23.62332 -23.27153 -23.19342 -21.34284 -20.72823 -19.32876 -19.16803 -17.91007 -17.21689 -16.56211 -16.09439 -15.81919 -15.79288 -15.33425 -15.07871 -14.81663 -14.55556 -14.47481 -14.33786 -14.07211 -14.03395 -13.84044 -13.54361 -13.31234 -13.08412 -12.93710 -12.76351 -12.62420 -12.47725 -12.08925 -12.04844 -11.86886 -11.71429 -11.28852 -11.21676 -11.01266 -10.94918 -10.70858 -10.69783 -10.48589 -10.33546 -10.04105 -9.92780 -9.55124 -9.43042 -9.17981 -9.09041 -8.46640 -8.42086 -7.40017 -6.05120 -4.05003 0.35289 0.90549 1.78868 2.47872 2.51246 2.79017 2.98861 3.29533 3.38048 3.41573 3.53449 3.65168 4.01590 4.38306 4.43425 4.59936 4.73886 4.83488 4.94602 5.02973 5.05650 5.14319 5.22446 5.31322 5.35224 5.40913 5.44352 5.47122 5.60434 5.62960 5.64536 5.82210 5.82501 5.84623 5.91319 6.03937 6.06712 6.09925 6.26499 6.43405 6.57262 6.64028 7.10330 7.19469 7.28767 7.29009 7.34141 7.72724 7.99306 8.06939 8.25803 8.45936 9.00592 9.58516 11.06054 Molecular weight = 377.13amu Principal moments of inertia in cm(-1) A = 0.008308 B = 0.002630 C = 0.002223 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3369.553719 B =10642.665541 C =12590.810824 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.258 3.742 3 C -0.051 4.051 4 C -0.037 4.037 5 C -0.149 4.149 6 C 0.206 3.794 7 N -0.684 5.684 8 C 0.509 3.491 9 O -0.468 6.468 10 C 0.036 3.964 11 N -0.509 5.509 12 C 0.193 3.807 13 C -0.501 4.501 14 H 0.062 0.938 15 C 0.057 3.943 16 N -0.898 5.898 17 Si 0.894 3.106 18 H -0.272 1.272 19 H -0.286 1.286 20 H -0.284 1.284 21 C 0.093 3.907 22 C -0.188 4.188 23 C 0.066 3.934 24 O -0.390 6.390 25 C 0.062 3.938 26 C -0.148 4.148 27 C -0.118 4.118 28 C 0.029 3.971 29 Cl -0.048 7.048 30 H 0.145 0.855 31 H 0.144 0.856 32 H 0.413 0.587 33 H 0.098 0.902 34 H 0.060 0.940 35 H -0.008 1.008 36 H 0.038 0.962 37 H 0.260 0.740 38 H 0.100 0.900 39 H 0.063 0.937 40 H 0.081 0.919 41 H 0.051 0.949 42 H 0.087 0.913 43 H 0.050 0.950 44 H 0.089 0.911 45 H 0.079 0.921 46 H 0.063 0.937 47 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.110 -16.815 5.509 17.695 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.087 5.087 2 C -0.057 4.057 3 C -0.056 4.056 4 C -0.058 4.058 5 C -0.170 4.170 6 C 0.108 3.892 7 N -0.331 5.331 8 C 0.296 3.704 9 O -0.337 6.337 10 C -0.096 4.096 11 N -0.233 5.233 12 C 0.069 3.931 13 C -0.539 4.539 14 H 0.081 0.919 15 C -0.144 4.144 16 N -0.537 5.537 17 Si 0.722 3.278 18 H -0.197 1.197 19 H -0.212 1.212 20 H -0.210 1.210 21 C -0.016 4.016 22 C -0.227 4.227 23 C -0.011 4.011 24 O -0.309 6.309 25 C -0.015 4.015 26 C -0.186 4.186 27 C -0.139 4.139 28 C -0.001 4.001 29 Cl -0.019 7.019 30 H 0.163 0.837 31 H 0.161 0.839 32 H 0.249 0.751 33 H 0.116 0.884 34 H 0.078 0.922 35 H 0.010 0.990 36 H 0.056 0.944 37 H 0.070 0.930 38 H 0.118 0.882 39 H 0.082 0.918 40 H 0.100 0.900 41 H 0.070 0.930 42 H 0.105 0.895 43 H 0.069 0.931 44 H 0.107 0.893 45 H 0.098 0.902 46 H 0.082 0.918 47 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -2.278 -15.763 6.098 17.055 hybrid contribution 0.912 0.663 -0.847 1.411 sum -1.366 -15.100 5.250 16.045 Atomic orbital electron populations 1.81217 1.11795 1.07963 1.07767 1.25380 0.92359 0.93958 0.93987 1.15778 0.84740 1.03343 1.01783 1.20874 0.93416 0.95808 0.95712 1.20949 0.93811 1.02966 0.99284 1.17799 0.83757 0.95180 0.92440 1.43765 1.03734 1.13246 1.72361 1.21249 0.90974 0.82034 0.76150 1.90790 1.69238 1.32265 1.41397 1.21934 0.90141 0.95768 1.01736 1.62060 1.13099 1.05732 1.42364 1.19825 0.96859 0.92066 0.84366 1.21079 1.43458 0.90933 0.98471 0.91937 1.24934 0.95417 0.99049 0.95025 1.69949 1.46206 1.33607 1.03978 0.86498 0.77877 0.85067 0.78326 1.19664 1.21203 1.21009 1.21695 0.87545 1.00324 0.92052 1.22905 0.96540 1.01132 1.02134 1.22503 0.95874 0.98699 0.84020 1.87857 1.74853 1.52108 1.16087 1.22569 0.92025 0.96043 0.90853 1.22312 0.96081 1.01471 0.98772 1.21189 0.91251 1.01421 1.00049 1.20739 0.92227 0.94008 0.93105 1.98414 1.76209 1.66860 1.60408 0.83746 0.83867 0.75056 0.88425 0.92241 0.99000 0.94401 0.93035 0.88162 0.91799 0.90002 0.93030 0.89488 0.93132 0.89314 0.90213 0.91835 0.82012 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -5.74 18.54 41.83 0.78 -4.96 16 2 C 0.26 3.13 14.38 -22.48 -0.32 2.81 16 3 C -0.05 -0.55 5.74 -106.77 -0.61 -1.16 16 4 C -0.04 -0.29 9.75 -39.21 -0.38 -0.68 16 5 C -0.15 -1.18 9.94 -39.45 -0.39 -1.57 16 6 C 0.21 2.20 6.28 -83.71 -0.53 1.68 16 7 N -0.68 -6.95 5.31 -9.85 -0.05 -7.01 16 8 C 0.51 7.57 7.19 -10.98 -0.08 7.49 16 9 O -0.47 -9.27 12.74 5.56 0.07 -9.19 16 10 C 0.04 0.51 4.08 -4.97 -0.02 0.49 16 11 N -0.51 -9.57 4.02 -229.30 -0.92 -10.50 16 12 C 0.19 4.64 4.26 -4.98 -0.02 4.62 16 13 C -0.50 -13.45 8.34 -34.44 -0.29 -13.74 16 14 H 0.06 1.68 7.20 -52.49 -0.38 1.30 16 15 C 0.06 1.58 5.46 -17.82 -0.10 1.48 16 16 N -0.90 -26.04 13.29 55.43 0.74 -25.31 16 17 Si 0.89 21.39 29.54 -169.99 -5.02 16.37 16 18 H -0.27 -6.38 7.11 56.52 0.40 -5.98 16 19 H -0.29 -6.72 7.11 56.52 0.40 -6.32 16 20 H -0.28 -6.87 7.11 56.52 0.40 -6.47 16 21 C 0.09 1.52 2.13 -67.53 -0.14 1.37 16 22 C -0.19 -2.71 4.73 -26.59 -0.13 -2.83 16 23 C 0.07 0.85 6.84 37.21 0.25 1.11 16 24 O -0.39 -5.23 10.76 -35.23 -0.38 -5.61 16 25 C 0.06 0.75 6.84 37.21 0.25 1.00 16 26 C -0.15 -1.97 5.47 -26.59 -0.15 -2.11 16 27 C -0.12 -1.49 8.44 -39.42 -0.33 -1.83 16 28 C 0.03 0.36 6.34 -39.10 -0.25 0.11 16 29 Cl -0.05 -0.62 28.02 -51.86 -1.45 -2.07 16 30 H 0.14 0.76 8.06 -52.49 -0.42 0.34 16 31 H 0.14 0.70 8.06 -52.48 -0.42 0.28 16 32 H 0.41 2.50 8.82 -40.82 -0.36 2.14 16 33 H 0.10 1.11 5.98 -51.93 -0.31 0.80 16 34 H 0.06 0.79 7.13 -51.93 -0.37 0.42 16 35 H -0.01 -0.19 6.58 -51.93 -0.34 -0.53 16 36 H 0.04 1.03 6.61 -51.93 -0.34 0.69 16 37 H 0.26 7.18 8.31 -40.82 -0.34 6.85 16 38 H 0.10 1.92 6.63 -51.93 -0.34 1.57 16 39 H 0.06 0.83 6.52 -51.93 -0.34 0.49 16 40 H 0.08 1.35 6.80 -51.93 -0.35 1.00 16 41 H 0.05 0.67 8.14 -51.93 -0.42 0.25 16 42 H 0.09 0.97 8.14 -51.93 -0.42 0.54 16 43 H 0.05 0.60 8.14 -51.93 -0.42 0.18 16 44 H 0.09 0.88 8.14 -51.93 -0.42 0.46 16 45 H 0.08 1.09 8.14 -51.92 -0.42 0.67 16 46 H 0.06 0.77 6.25 -51.93 -0.32 0.45 16 47 H 0.16 2.37 6.28 -52.49 -0.33 2.04 16 LS Contribution 399.72 15.07 6.02 6.02 Total: -1.00 -33.50 399.72 -9.34 -42.84 By element: Atomic # 1 Polarization: 7.05 SS G_CDS: -5.89 Total: 1.16 kcal Atomic # 6 Polarization: 1.47 SS G_CDS: -3.23 Total: -1.76 kcal Atomic # 7 Polarization: -48.31 SS G_CDS: 0.54 Total: -47.77 kcal Atomic # 8 Polarization: -14.49 SS G_CDS: -0.31 Total: -14.80 kcal Atomic # 14 Polarization: 21.39 SS G_CDS: -5.02 Total: 16.37 kcal Atomic # 17 Polarization: -0.62 SS G_CDS: -1.45 Total: -2.07 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -33.50 -9.34 -42.84 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000069975600.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.114 kcal (2) G-P(sol) polarization free energy of solvation -33.503 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.389 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.337 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.840 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.726 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds