Wall clock time and date at job start Tue Mar 31 2020 05:32:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46907 * 1 3 3 C 1.46899 * 110.99822 * 2 1 4 4 C 1.39993 * 110.99594 * 236.05027 * 2 1 3 5 5 C 1.38692 * 120.08387 * 59.72233 * 4 2 1 6 6 C 1.38243 * 120.00356 * 179.74658 * 5 4 2 7 7 C 1.38373 * 120.17380 * 0.54818 * 6 5 4 8 8 Cl 1.73601 * 119.91489 * 179.72284 * 7 6 5 9 9 C 1.38343 * 120.17095 * 359.70692 * 7 6 5 10 10 C 1.38647 * 119.99118 * 0.02562 * 9 7 6 11 11 N 1.40207 * 120.08638 * 179.97438 * 10 9 7 12 12 C 1.34777 * 119.99783 * 24.77379 * 11 10 9 13 13 O 1.21594 * 120.00029 * 5.63478 * 12 11 10 14 14 N 1.34772 * 119.99537 * 185.62451 * 12 11 10 15 15 C 1.46508 * 119.99767 * 180.02562 * 14 12 11 16 16 C 1.50699 * 109.46655 * 90.00205 * 15 14 12 17 17 H 1.08000 * 120.00725 * 0.02562 * 16 15 14 18 18 C 1.37886 * 119.99939 * 179.97438 * 16 15 14 19 19 N 1.31514 * 119.99748 * 0.02562 * 18 16 15 20 20 Si 1.86800 * 120.00197 * 180.02562 * 18 16 15 21 21 H 1.48494 * 109.47035 * 59.99913 * 20 18 16 22 22 H 1.48490 * 109.46862 * 180.02562 * 20 18 16 23 23 H 1.48507 * 109.46901 * 300.00073 * 20 18 16 24 24 C 1.46495 * 120.00686 * 0.02562 * 14 12 11 25 25 C 1.50702 * 109.47076 * 89.99591 * 24 14 12 26 26 C 1.34507 * 125.79021 * 89.72170 * 25 24 14 27 27 C 1.41380 * 106.84356 * 179.88904 * 26 25 24 28 28 C 1.34512 * 106.83964 * 0.36862 * 27 26 25 29 29 O 1.34304 * 125.78708 * 270.02510 * 25 24 14 30 30 H 1.08995 * 109.46951 * 183.95557 * 1 2 3 31 31 H 1.08999 * 109.47175 * 63.95249 * 1 2 3 32 32 H 1.09003 * 109.46810 * 303.94883 * 1 2 3 33 33 H 1.09003 * 109.46926 * 59.99947 * 3 2 1 34 34 H 1.09001 * 109.47494 * 180.02562 * 3 2 1 35 35 H 1.09000 * 109.47267 * 300.00406 * 3 2 1 36 36 H 1.08001 * 120.00117 * 0.02562 * 5 4 2 37 37 H 1.08002 * 119.91117 * 180.25658 * 6 5 4 38 38 H 1.08002 * 119.99979 * 180.02562 * 9 7 6 39 39 H 0.96997 * 119.99939 * 204.77638 * 11 10 9 40 40 H 1.08997 * 109.47370 * 210.00194 * 15 14 12 41 41 H 1.08997 * 109.47082 * 330.00798 * 15 14 12 42 42 H 0.96998 * 119.99823 * 179.97438 * 19 18 16 43 43 H 1.09001 * 109.47635 * 209.99759 * 24 14 12 44 44 H 1.09003 * 109.47012 * 329.99755 * 24 14 12 45 45 H 1.08010 * 126.57935 * 0.02562 * 26 25 24 46 46 H 1.07998 * 126.58181 * 180.16653 * 27 26 25 47 47 H 1.08000 * 125.79339 * 179.75078 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.9707 -0.7299 -1.0842 5 6 1.6549 -0.3537 -2.3812 6 6 2.1554 -1.0726 -3.4507 7 6 2.9626 -2.1748 -3.2312 8 17 3.5815 -3.0769 -4.5790 9 6 3.2779 -2.5596 -1.9403 10 6 2.7842 -1.8404 -0.8626 11 7 3.1021 -2.2289 0.4465 12 6 4.2256 -2.9336 0.6863 13 8 5.0149 -3.1444 -0.2143 14 7 4.4744 -3.4044 1.9244 15 6 5.6960 -4.1700 2.1852 16 6 6.8002 -3.2296 2.5943 17 1 6.6110 -2.1680 2.6545 18 6 8.0521 -3.7246 2.8928 19 7 8.2824 -5.0174 2.8200 20 14 9.4207 -2.5591 3.4007 21 1 9.0198 -1.8314 4.6314 22 1 10.6589 -3.3350 3.6649 23 1 9.6714 -1.5844 2.3087 24 6 3.5233 -3.1508 3.0094 25 6 2.5117 -4.2666 3.0617 26 6 2.6276 -5.4006 3.7756 27 6 1.4578 -6.1574 3.5352 28 6 0.7007 -5.4442 2.6823 29 8 1.3441 -4.2997 2.3989 30 1 -0.3633 -1.0252 0.0709 31 1 -0.3633 0.4513 -0.9233 32 1 -0.3633 0.5739 0.8525 33 1 1.6459 1.8948 0.8900 34 1 3.0851 1.3425 -0.0005 35 1 1.6459 1.8948 -0.8899 36 1 1.0216 0.5035 -2.5559 37 1 1.9119 -0.7758 -4.4603 38 1 3.9085 -3.4201 -1.7721 39 1 2.5133 -1.9906 1.1796 40 1 5.5123 -4.8853 2.9867 41 1 5.9899 -4.7041 1.2816 42 1 9.1632 -5.3656 3.0297 43 1 4.0586 -3.1010 3.9576 44 1 3.0120 -2.2049 2.8307 45 1 3.4545 -5.6787 4.4124 46 1 1.2194 -7.1242 3.9533 47 1 -0.2611 -5.7415 2.2913 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000089326620.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:32:28 Heat of formation + Delta-G solvation = 38.344725 kcal Electronic energy + Delta-G solvation = -32950.277372 eV Core-core repulsion = 28547.916508 eV Total energy + Delta-G solvation = -4402.360863 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 377.129 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.34521 -40.64557 -39.11872 -37.06755 -36.01998 -35.30626 -34.36088 -32.81622 -32.61390 -30.26206 -29.99748 -29.34789 -27.76514 -27.20504 -25.49688 -24.63232 -23.56269 -22.14328 -21.50917 -21.11680 -20.56966 -19.37985 -18.15739 -17.55635 -17.01153 -16.63956 -16.33700 -15.75863 -15.72733 -15.33481 -15.21658 -14.85864 -14.69127 -14.23288 -14.06766 -13.93105 -13.76850 -13.28686 -13.09648 -12.73171 -12.72342 -12.63028 -12.55034 -12.53315 -12.19416 -12.13537 -11.88692 -11.70385 -11.61299 -11.35903 -11.24647 -10.95478 -10.87229 -10.60727 -10.22022 -10.15890 -9.74812 -9.67853 -9.35115 -8.77269 -8.59124 -8.45066 -8.34091 -8.03573 -7.68725 -6.06045 -4.11016 1.09420 1.35272 1.87286 2.21088 2.78521 3.12791 3.18393 3.31654 3.36722 3.39979 3.48036 3.68309 3.95719 4.33954 4.47492 4.76289 4.89221 4.93554 5.07778 5.10278 5.11990 5.24098 5.24286 5.28473 5.31619 5.35107 5.44370 5.51676 5.65825 5.74095 5.77357 5.82254 5.90714 5.98916 6.16138 6.20267 6.26794 6.30320 6.53232 6.66501 6.67412 6.71344 6.89381 7.27627 7.29058 7.33896 7.43621 7.63258 7.90800 8.18807 8.44715 8.88801 9.12292 9.54260 11.01897 Molecular weight = 377.13amu Principal moments of inertia in cm(-1) A = 0.006529 B = 0.003592 C = 0.002995 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 4287.750269 B = 7793.625860 C = 9348.037417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 N -0.506 5.506 3 C 0.030 3.970 4 C 0.040 3.960 5 C -0.114 4.114 6 C -0.137 4.137 7 C -0.010 4.010 8 Cl -0.071 7.071 9 C -0.124 4.124 10 C 0.227 3.773 11 N -0.675 5.675 12 C 0.700 3.300 13 O -0.560 6.560 14 N -0.599 5.599 15 C 0.261 3.739 16 C -0.530 4.530 17 H 0.058 0.942 18 C 0.064 3.936 19 N -0.893 5.893 20 Si 0.898 3.102 21 H -0.277 1.277 22 H -0.287 1.287 23 H -0.276 1.276 24 C 0.191 3.809 25 C -0.030 4.030 26 C -0.190 4.190 27 C -0.214 4.214 28 C -0.048 4.048 29 O -0.175 6.175 30 H 0.070 0.930 31 H 0.031 0.969 32 H 0.072 0.928 33 H 0.073 0.927 34 H 0.072 0.928 35 H 0.030 0.970 36 H 0.127 0.873 37 H 0.129 0.871 38 H 0.165 0.835 39 H 0.412 0.588 40 H 0.037 0.963 41 H 0.047 0.953 42 H 0.264 0.736 43 H 0.121 0.879 44 H 0.078 0.922 45 H 0.150 0.850 46 H 0.144 0.856 47 H 0.197 0.803 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.887 7.287 -4.362 21.624 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 N -0.227 5.227 3 C -0.117 4.117 4 C -0.057 4.057 5 C -0.135 4.135 6 C -0.157 4.157 7 C -0.037 4.037 8 Cl -0.042 7.042 9 C -0.146 4.146 10 C 0.127 3.873 11 N -0.322 5.322 12 C 0.402 3.598 13 O -0.436 6.436 14 N -0.333 5.333 15 C 0.143 3.857 16 C -0.569 4.569 17 H 0.076 0.924 18 C -0.138 4.138 19 N -0.532 5.532 20 Si 0.725 3.275 21 H -0.202 1.202 22 H -0.212 1.212 23 H -0.202 1.202 24 C 0.066 3.934 25 C -0.082 4.082 26 C -0.210 4.210 27 C -0.233 4.233 28 C -0.116 4.116 29 O -0.071 6.071 30 H 0.089 0.911 31 H 0.049 0.951 32 H 0.091 0.909 33 H 0.091 0.909 34 H 0.091 0.909 35 H 0.049 0.951 36 H 0.145 0.855 37 H 0.147 0.853 38 H 0.182 0.818 39 H 0.250 0.750 40 H 0.055 0.945 41 H 0.065 0.935 42 H 0.074 0.926 43 H 0.139 0.861 44 H 0.097 0.903 45 H 0.168 0.832 46 H 0.162 0.838 47 H 0.214 0.786 Dipole moment (debyes) X Y Z Total from point charges -18.952 6.847 -4.713 20.695 hybrid contribution 0.262 0.731 -0.009 0.777 sum -18.690 7.578 -4.722 20.713 Atomic orbital electron populations 1.22481 0.86024 1.02735 1.00758 1.59496 1.08299 1.14367 1.40582 1.22443 1.01305 0.87138 1.00777 1.18442 1.02693 0.95119 0.89430 1.21166 1.00531 0.99948 0.91815 1.20739 0.99827 0.95664 0.99488 1.20723 0.99182 0.95245 0.88583 1.98361 1.86484 1.74448 1.44942 1.21407 1.01892 1.02268 0.89016 1.17207 0.94512 0.91246 0.84318 1.42903 1.25149 1.56745 1.07439 1.15970 0.80777 0.78952 0.84110 1.90880 1.47345 1.62291 1.43055 1.47695 1.23441 1.56520 1.05636 1.19303 0.78081 0.90484 0.97878 1.21392 0.95274 0.93909 1.46277 0.92373 1.24903 0.98362 0.95159 0.95412 1.69919 1.22867 1.11765 1.48605 0.86567 0.81144 0.80804 0.78956 1.20236 1.21209 1.20198 1.19839 0.86916 0.91987 0.94643 1.23267 0.87033 1.00588 0.97303 1.21692 1.00086 0.94586 1.04668 1.21821 0.96039 1.02109 1.03315 1.23921 0.99525 0.86119 1.02022 1.84004 1.28441 1.37712 1.56966 0.91096 0.95086 0.90910 0.90866 0.90928 0.95128 0.85492 0.85318 0.81767 0.74960 0.94539 0.93533 0.92616 0.86139 0.90341 0.83185 0.83775 0.78632 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.23 9.34 60.07 0.56 0.79 16 2 N -0.51 -5.55 4.33 -186.65 -0.81 -6.36 16 3 C 0.03 0.29 9.33 60.06 0.56 0.85 16 4 C 0.04 0.52 4.74 -83.52 -0.40 0.13 16 5 C -0.11 -1.29 8.62 -39.41 -0.34 -1.63 16 6 C -0.14 -1.64 9.82 -39.53 -0.39 -2.03 16 7 C -0.01 -0.15 6.32 -39.49 -0.25 -0.39 16 8 Cl -0.07 -0.99 28.95 -51.86 -1.50 -2.50 16 9 C -0.12 -2.12 8.50 -39.39 -0.33 -2.45 16 10 C 0.23 3.65 6.45 -83.43 -0.54 3.11 16 11 N -0.68 -11.39 5.16 -14.07 -0.07 -11.47 16 12 C 0.70 14.74 8.08 -86.92 -0.70 14.03 16 13 O -0.56 -13.94 13.09 5.28 0.07 -13.87 16 14 N -0.60 -12.34 2.44 -182.18 -0.44 -12.78 16 15 C 0.26 6.58 5.16 -5.19 -0.03 6.55 16 16 C -0.53 -14.47 9.39 -34.44 -0.32 -14.80 16 17 H 0.06 1.58 7.81 -52.49 -0.41 1.17 16 18 C 0.06 1.78 5.46 -17.82 -0.10 1.69 16 19 N -0.89 -25.92 13.29 55.43 0.74 -25.19 16 20 Si 0.90 21.50 29.54 -169.99 -5.02 16.47 16 21 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 22 H -0.29 -6.78 7.11 56.52 0.40 -6.38 16 23 H -0.28 -6.72 7.11 56.52 0.40 -6.31 16 24 C 0.19 3.04 5.75 -5.20 -0.03 3.01 16 25 C -0.03 -0.47 6.90 -35.63 -0.25 -0.71 16 26 C -0.19 -2.89 10.81 -39.71 -0.43 -3.32 16 27 C -0.21 -2.79 10.91 -39.70 -0.43 -3.22 16 28 C -0.05 -0.59 12.09 29.42 0.36 -0.23 16 29 O -0.18 -2.54 10.65 5.69 0.06 -2.48 16 30 H 0.07 0.63 8.14 -51.93 -0.42 0.21 16 31 H 0.03 0.23 7.11 -51.93 -0.37 -0.14 16 32 H 0.07 0.51 8.14 -51.93 -0.42 0.08 16 33 H 0.07 0.58 8.14 -51.93 -0.42 0.16 16 34 H 0.07 0.81 8.13 -51.93 -0.42 0.39 16 35 H 0.03 0.26 7.49 -51.93 -0.39 -0.13 16 36 H 0.13 1.12 7.05 -52.49 -0.37 0.75 16 37 H 0.13 1.25 8.06 -52.49 -0.42 0.83 16 38 H 0.17 3.29 5.78 -52.49 -0.30 2.99 16 39 H 0.41 6.13 5.97 -40.82 -0.24 5.89 16 40 H 0.04 0.92 8.07 -51.93 -0.42 0.50 16 41 H 0.05 1.34 7.42 -51.93 -0.39 0.96 16 42 H 0.26 7.30 8.31 -40.82 -0.34 6.96 16 43 H 0.12 1.85 8.07 -51.93 -0.42 1.43 16 44 H 0.08 1.06 6.29 -51.93 -0.33 0.73 16 45 H 0.15 2.25 8.06 -52.48 -0.42 1.83 16 46 H 0.14 1.54 8.06 -52.49 -0.42 1.12 16 47 H 0.20 1.60 8.06 -52.49 -0.42 1.18 16 LS Contribution 410.60 15.07 6.19 6.19 Total: -1.00 -32.39 410.60 -10.00 -42.39 By element: Atomic # 1 Polarization: 14.37 SS G_CDS: -6.15 Total: 8.22 kcal Atomic # 6 Polarization: 4.43 SS G_CDS: -3.06 Total: 1.38 kcal Atomic # 7 Polarization: -55.21 SS G_CDS: -0.59 Total: -55.80 kcal Atomic # 8 Polarization: -16.48 SS G_CDS: 0.13 Total: -16.35 kcal Atomic # 14 Polarization: 21.50 SS G_CDS: -5.02 Total: 16.47 kcal Atomic # 17 Polarization: -0.99 SS G_CDS: -1.50 Total: -2.50 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -32.39 -10.00 -42.39 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000089326620.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.734 kcal (2) G-P(sol) polarization free energy of solvation -32.387 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.347 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.002 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.390 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.345 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds