Wall clock time and date at job start Tue Mar 31 2020 05:33:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 N 1.46499 * 109.47067 * 2 1 4 4 C 1.46507 * 119.99961 * 75.01471 * 3 2 1 5 5 C 1.50698 * 109.47231 * 89.99315 * 4 3 2 6 6 H 1.08002 * 120.00313 * 0.02562 * 5 4 3 7 7 C 1.37877 * 120.00010 * 179.97438 * 5 4 3 8 8 N 1.31520 * 119.99945 * 0.02562 * 7 5 4 9 9 Si 1.86795 * 120.00287 * 180.02562 * 7 5 4 10 10 H 1.48506 * 109.47136 * 359.97438 * 9 7 5 11 11 H 1.48500 * 109.47525 * 120.00286 * 9 7 5 12 12 H 1.48502 * 109.47115 * 240.00518 * 9 7 5 13 13 C 1.34772 * 120.00463 * 255.00933 * 3 2 1 14 14 O 1.21553 * 120.00111 * 183.85012 * 13 3 2 15 15 C 1.47846 * 119.99806 * 3.85503 * 13 3 2 16 16 C 1.39592 * 120.14552 * 22.56861 * 15 13 3 17 17 C 1.37934 * 119.85253 * 179.74598 * 16 15 13 18 18 C 1.38377 * 120.14866 * 0.53805 * 17 16 15 19 19 C 1.38338 * 120.29006 * 359.73889 * 18 17 16 20 20 C 1.50698 * 119.92946 * 180.02562 * 19 18 17 21 21 Cl 1.80298 * 109.47007 * 269.97858 * 20 19 18 22 22 C 1.37986 * 120.14531 * 359.97438 * 19 18 17 23 23 H 1.08993 * 109.47333 * 299.99757 * 1 2 3 24 24 H 1.09003 * 109.47156 * 59.99930 * 1 2 3 25 25 H 1.08998 * 109.46636 * 179.97438 * 1 2 3 26 26 H 1.09000 * 109.47494 * 240.00559 * 2 1 3 27 27 H 1.09003 * 109.47156 * 120.00070 * 2 1 3 28 28 H 1.09010 * 109.46880 * 329.99716 * 4 3 2 29 29 H 1.08997 * 109.47326 * 210.00286 * 4 3 2 30 30 H 0.96996 * 119.99853 * 179.97438 * 8 7 5 31 31 H 1.08004 * 120.07442 * 0.02562 * 16 15 13 32 32 H 1.08005 * 119.92503 * 180.25548 * 17 16 15 33 33 H 1.07999 * 119.85626 * 179.76331 * 18 17 16 34 34 H 1.08995 * 109.47013 * 29.97564 * 20 19 18 35 35 H 1.09004 * 109.47307 * 149.97910 * 20 19 18 36 36 H 1.07996 * 120.07492 * 180.02562 * 22 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 1.9532 2.1812 1.2256 5 6 3.2248 1.9979 2.0134 6 1 4.0038 1.3506 1.6384 7 6 3.3941 2.6574 3.2123 8 7 2.4457 3.4460 3.6687 9 14 4.9705 2.4308 4.1884 10 1 5.8717 1.4989 3.4639 11 1 5.6441 3.7440 4.3528 12 1 4.6488 1.8687 5.5247 13 6 2.5276 1.9160 -1.1274 14 8 2.9967 3.0372 -1.1102 15 6 2.5155 1.1389 -2.3851 16 6 1.6024 0.0971 -2.5567 17 6 1.5930 -0.6205 -3.7346 18 6 2.4934 -0.3170 -4.7406 19 6 3.4047 0.7105 -4.5747 20 6 4.3812 1.0345 -5.6758 21 17 5.8859 0.0676 -5.4483 22 6 3.4209 1.4400 -3.4036 23 1 -0.3633 0.5138 0.8899 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3632 -1.0277 -0.0005 26 1 1.8934 -0.5137 -0.8900 27 1 1.8934 -0.5139 0.8900 28 1 1.1035 1.8567 1.8266 29 1 1.8344 3.2333 0.9669 30 1 2.5647 3.9096 4.5123 31 1 0.9019 -0.1436 -1.7707 32 1 0.8843 -1.4242 -3.8703 33 1 2.4844 -0.8845 -5.6595 34 1 3.9353 0.7911 -6.6401 35 1 4.6239 2.0967 -5.6454 36 1 4.1325 2.2422 -3.2755 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000037834464.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:33:45 Heat of formation + Delta-G solvation = 3.787120 kcal Electronic energy + Delta-G solvation = -19590.969074 eV Core-core repulsion = 16487.934973 eV Total energy + Delta-G solvation = -3103.034101 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 281.092 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -40.24427 -38.13974 -36.11030 -35.67421 -33.18300 -32.22856 -31.05260 -30.31294 -27.43761 -26.63817 -24.01168 -23.14602 -22.00229 -21.61247 -18.87839 -16.81760 -16.67940 -16.35714 -15.80610 -14.96270 -14.83246 -14.57263 -14.32670 -14.13982 -13.73649 -13.31638 -13.16907 -13.02802 -12.55596 -12.14665 -12.02383 -11.80046 -11.42037 -11.25493 -11.17249 -10.87824 -10.73512 -10.59944 -10.55581 -10.41814 -10.12395 -9.62644 -9.08164 -8.92363 -8.69594 -8.43591 -7.70448 -6.04595 -4.08807 0.88681 1.19077 2.27989 3.30441 3.32411 3.38352 3.43149 3.79427 4.09334 4.38092 4.45364 4.58099 4.81818 4.94633 5.01262 5.13221 5.20510 5.30307 5.41073 5.48044 5.52045 5.67405 5.77952 5.92714 5.94000 6.21665 6.27948 6.34604 6.40360 6.48629 6.81814 7.06457 7.41338 7.50794 7.91909 8.22635 8.36014 8.88298 9.03975 9.56212 11.03633 Molecular weight = 281.09amu Principal moments of inertia in cm(-1) A = 0.018650 B = 0.004665 C = 0.004031 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1500.941764 B = 6000.217384 C = 6944.854418 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.074 3.926 3 N -0.586 5.586 4 C 0.246 3.754 5 C -0.524 4.524 6 H 0.058 0.942 7 C 0.061 3.939 8 N -0.895 5.895 9 Si 0.898 3.102 10 H -0.273 1.273 11 H -0.282 1.282 12 H -0.284 1.284 13 C 0.543 3.457 14 O -0.535 6.535 15 C -0.118 4.118 16 C -0.115 4.115 17 C -0.132 4.132 18 C -0.086 4.086 19 C -0.123 4.123 20 C 0.013 3.987 21 Cl -0.180 7.180 22 C -0.045 4.045 23 H 0.070 0.930 24 H 0.058 0.942 25 H 0.064 0.936 26 H 0.095 0.905 27 H 0.078 0.922 28 H 0.035 0.965 29 H 0.044 0.956 30 H 0.263 0.737 31 H 0.167 0.833 32 H 0.128 0.872 33 H 0.124 0.876 34 H 0.101 0.899 35 H 0.103 0.897 36 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.853 -9.947 -17.459 20.295 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C -0.050 4.050 3 N -0.317 5.317 4 C 0.127 3.873 5 C -0.563 4.563 6 H 0.076 0.924 7 C -0.141 4.141 8 N -0.535 5.535 9 Si 0.726 3.274 10 H -0.198 1.198 11 H -0.208 1.208 12 H -0.210 1.210 13 C 0.330 3.670 14 O -0.413 6.413 15 C -0.121 4.121 16 C -0.132 4.132 17 C -0.150 4.150 18 C -0.105 4.105 19 C -0.123 4.123 20 C -0.050 4.050 21 Cl -0.153 7.153 22 C -0.064 4.064 23 H 0.089 0.911 24 H 0.077 0.923 25 H 0.083 0.917 26 H 0.113 0.887 27 H 0.096 0.904 28 H 0.053 0.947 29 H 0.062 0.938 30 H 0.072 0.928 31 H 0.184 0.816 32 H 0.146 0.854 33 H 0.142 0.858 34 H 0.119 0.881 35 H 0.121 0.879 36 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -2.538 -9.288 -17.233 19.740 hybrid contribution 0.895 -0.177 0.698 1.149 sum -1.644 -9.464 -16.534 19.122 Atomic orbital electron populations 1.22288 0.96469 1.01903 1.02966 1.22289 0.93878 0.84860 1.03961 1.48136 1.59022 1.12985 1.11549 1.19314 0.97263 0.91526 0.79173 1.21461 1.02397 1.27843 1.04623 0.92373 1.24927 0.96809 0.94902 0.97443 1.69941 1.32998 1.29540 1.20976 0.86443 0.83336 0.78070 0.79594 1.19784 1.20847 1.20968 1.18162 0.79318 0.86392 0.83157 1.90754 1.45513 1.19618 1.85413 1.20287 0.98246 0.97714 0.95887 1.22741 0.98827 0.93555 0.98123 1.21109 0.99691 1.00830 0.93414 1.21132 0.94468 0.95748 0.99111 1.19604 0.98205 0.98651 0.95831 1.23140 0.85114 0.98169 0.98536 1.98741 1.42174 1.76319 1.98110 1.21152 0.96648 0.97702 0.90914 0.91052 0.92313 0.91702 0.88701 0.90374 0.94704 0.93833 0.92779 0.81612 0.85385 0.85818 0.88057 0.87871 0.84721 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.34 9.04 37.16 0.34 -2.00 16 2 C 0.07 1.18 5.59 -4.04 -0.02 1.16 16 3 N -0.59 -12.55 2.49 -176.17 -0.44 -12.99 16 4 C 0.25 6.43 5.08 -5.19 -0.03 6.41 16 5 C -0.52 -15.01 9.39 -34.44 -0.32 -15.33 16 6 H 0.06 1.68 7.81 -52.49 -0.41 1.27 16 7 C 0.06 1.75 5.46 -17.82 -0.10 1.66 16 8 N -0.90 -26.63 13.29 55.43 0.74 -25.90 16 9 Si 0.90 22.09 29.54 -169.99 -5.02 17.07 16 10 H -0.27 -6.67 7.11 56.52 0.40 -6.27 16 11 H -0.28 -6.95 7.11 56.52 0.40 -6.55 16 12 H -0.28 -6.78 7.11 56.52 0.40 -6.38 16 13 C 0.54 11.77 7.52 -12.33 -0.09 11.68 16 14 O -0.53 -13.85 16.19 5.32 0.09 -13.76 16 15 C -0.12 -1.97 5.61 -104.97 -0.59 -2.56 16 16 C -0.11 -1.51 7.52 -39.19 -0.29 -1.80 16 17 C -0.13 -1.39 10.03 -39.64 -0.40 -1.79 16 18 C -0.09 -0.88 9.69 -39.49 -0.38 -1.26 16 19 C -0.12 -1.42 5.25 -104.68 -0.55 -1.97 16 20 C 0.01 0.12 6.78 36.00 0.24 0.36 16 21 Cl -0.18 -2.03 29.13 -51.86 -1.51 -3.54 16 22 C -0.04 -0.68 9.24 -39.18 -0.36 -1.04 16 23 H 0.07 1.06 7.43 -51.93 -0.39 0.68 16 24 H 0.06 0.73 7.02 -51.93 -0.36 0.36 16 25 H 0.06 0.64 8.14 -51.93 -0.42 0.22 16 26 H 0.10 1.33 4.04 -52.39 -0.21 1.11 16 27 H 0.08 1.31 8.14 -51.93 -0.42 0.89 16 28 H 0.04 0.91 7.32 -51.92 -0.38 0.53 16 29 H 0.04 1.28 7.48 -51.93 -0.39 0.89 16 30 H 0.26 7.36 8.31 -40.82 -0.34 7.02 16 31 H 0.17 2.01 2.30 -52.48 -0.12 1.89 16 32 H 0.13 0.96 8.06 -52.48 -0.42 0.54 16 33 H 0.12 0.92 8.06 -52.49 -0.42 0.50 16 34 H 0.10 0.66 8.08 -51.93 -0.42 0.24 16 35 H 0.10 0.85 8.08 -51.93 -0.42 0.44 16 36 H 0.13 2.12 7.82 -52.49 -0.41 1.71 16 LS Contribution 316.24 15.07 4.77 4.77 Total: -1.00 -33.45 316.24 -8.28 -41.72 By element: Atomic # 1 Polarization: 3.44 SS G_CDS: -4.34 Total: -0.89 kcal Atomic # 6 Polarization: -3.93 SS G_CDS: -2.56 Total: -6.49 kcal Atomic # 7 Polarization: -39.18 SS G_CDS: 0.30 Total: -38.89 kcal Atomic # 8 Polarization: -13.85 SS G_CDS: 0.09 Total: -13.76 kcal Atomic # 14 Polarization: 22.09 SS G_CDS: -5.02 Total: 17.07 kcal Atomic # 17 Polarization: -2.03 SS G_CDS: -1.51 Total: -3.54 kcal Total LS contribution 4.77 Total: 4.77 kcal Total: -33.45 -8.28 -41.72 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000037834464.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.511 kcal (2) G-P(sol) polarization free energy of solvation -33.447 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.064 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.277 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.724 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.787 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds