Wall clock time and date at job start Tue Mar 31 2020 05:26:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31157 * 1 3 3 Cl 1.73604 * 120.00307 * 2 1 4 4 C 1.50697 * 119.99803 * 179.97438 * 2 1 3 5 5 N 1.46897 * 109.47264 * 115.00544 * 4 2 1 6 6 C 1.46901 * 110.99967 * 179.97438 * 5 4 2 7 7 H 1.08998 * 109.47239 * 35.00254 * 6 5 4 8 8 C 1.53001 * 109.47526 * 275.00163 * 6 5 4 9 9 C 1.50705 * 109.46951 * 154.99770 * 6 5 4 10 10 C 1.38297 * 119.92624 * 39.73127 * 9 6 5 11 11 C 1.38104 * 120.06554 * 179.72359 * 10 9 6 12 12 C 1.38880 * 119.93221 * 0.54664 * 11 10 9 13 13 O 1.35744 * 120.07034 * 179.74811 * 12 11 10 14 14 C 1.34835 * 117.00091 * 174.44172 * 13 12 11 15 15 H 1.08005 * 119.99659 * 5.05388 * 14 13 12 16 16 C 1.38655 * 120.00213 * 185.05758 * 14 13 12 17 17 N 1.31554 * 119.99512 * 359.97438 * 16 14 13 18 18 Si 1.86802 * 120.00015 * 179.97438 * 16 14 13 19 19 H 1.48497 * 109.47043 * 89.99794 * 18 16 14 20 20 H 1.48496 * 109.47058 * 209.99740 * 18 16 14 21 21 H 1.48504 * 109.46663 * 329.99932 * 18 16 14 22 22 C 1.38882 * 119.85869 * 359.72691 * 12 11 10 23 23 C 1.38100 * 119.93379 * 359.97438 * 22 12 11 24 24 H 1.08000 * 120.00558 * 179.97438 * 1 2 3 25 25 H 1.08000 * 119.99849 * 0.02562 * 1 2 3 26 26 H 1.09004 * 109.47480 * 235.00922 * 4 2 1 27 27 H 1.09001 * 109.47242 * 354.99980 * 4 2 1 28 28 H 1.00899 * 111.00000 * 303.95211 * 5 4 2 29 29 H 1.08994 * 109.47153 * 59.99723 * 8 6 5 30 30 H 1.08993 * 109.47341 * 180.02562 * 8 6 5 31 31 H 1.08997 * 109.46483 * 300.00001 * 8 6 5 32 32 H 1.07996 * 119.96826 * 359.97438 * 10 9 6 33 33 H 1.08007 * 120.03256 * 180.27172 * 11 10 9 34 34 H 0.97010 * 119.99221 * 180.02562 * 17 16 14 35 35 H 1.07994 * 120.03389 * 179.97438 * 22 12 11 36 36 H 1.08000 * 119.96729 * 180.02562 * 23 22 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3116 0.0000 0.0000 3 17 2.1797 1.5034 0.0000 4 6 2.0650 -1.3051 0.0006 5 7 2.8168 -1.4371 -1.2545 6 6 3.5659 -2.7003 -1.2891 7 1 2.9918 -3.4771 -0.7839 8 6 4.9092 -2.5164 -0.5803 9 6 3.8046 -3.1036 -2.7215 10 6 4.1261 -2.1439 -3.6640 11 6 4.3511 -2.5110 -4.9762 12 6 4.2432 -3.8438 -5.3512 13 8 4.4587 -4.2070 -6.6413 14 6 4.4515 -5.5273 -6.9149 15 1 4.1990 -6.2377 -6.1415 16 6 4.7684 -5.9731 -8.1890 17 7 5.0755 -5.1077 -9.1311 18 14 4.7591 -7.8023 -8.5678 19 1 3.4073 -8.2046 -9.0325 20 1 5.7546 -8.0927 -9.6307 21 1 5.1079 -8.5634 -7.3413 22 6 3.9146 -4.8043 -4.4034 23 6 3.6969 -4.4318 -3.0916 24 1 -0.5401 -0.9353 -0.0004 25 1 -0.5400 0.9353 -0.0004 26 1 2.7571 -1.3248 0.8425 27 1 1.3601 -2.1316 0.0905 28 1 2.2049 -1.3572 -2.0527 29 1 4.7365 -2.2248 0.4556 30 1 5.4651 -3.4536 -0.6064 31 1 5.4832 -1.7397 -1.0856 32 1 4.2052 -1.1070 -3.3728 33 1 4.6064 -1.7616 -5.7110 34 1 5.2968 -5.4196 -10.0226 35 1 3.8295 -5.8415 -4.6920 36 1 3.4418 -5.1783 -2.3540 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000164632485.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:26:23 Heat of formation + Delta-G solvation = 5.301669 kcal Electronic energy + Delta-G solvation = -18805.393643 eV Core-core repulsion = 15702.425217 eV Total energy + Delta-G solvation = -3102.968425 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 281.092 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -39.25764 -37.85635 -36.87220 -35.64312 -33.48132 -32.23987 -30.35664 -29.99275 -27.94835 -25.58921 -25.24107 -22.31707 -21.80098 -20.30657 -19.83344 -17.94655 -17.16932 -16.56070 -15.40234 -15.14136 -14.64068 -14.49774 -14.24715 -13.95855 -13.69708 -13.43233 -12.90504 -12.78137 -12.59076 -12.32644 -12.26261 -11.87598 -11.77340 -11.67312 -11.29434 -11.21023 -10.90064 -10.69123 -10.64613 -10.43849 -10.33981 -9.39117 -9.34349 -8.84230 -8.46689 -8.18034 -7.19346 -6.46438 -4.05408 1.63338 2.13908 2.21703 2.28986 3.11251 3.12376 3.17195 3.95309 4.13925 4.52871 4.55174 5.00932 5.08271 5.14272 5.30350 5.31992 5.37568 5.43886 5.65721 5.67438 5.82989 5.87358 5.93544 6.00419 6.01787 6.22631 6.38095 6.46200 6.72313 6.83048 6.98068 7.02646 7.24188 7.36453 7.42140 7.48765 7.82204 7.98579 8.99183 9.69519 10.71553 Molecular weight = 281.09amu Principal moments of inertia in cm(-1) A = 0.034592 B = 0.003062 C = 0.002999 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 809.248243 B = 9143.068088 C = 9335.319439 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.182 4.182 2 C -0.059 4.059 3 Cl -0.078 7.078 4 C 0.093 3.907 5 N -0.677 5.677 6 C 0.144 3.856 7 H 0.041 0.959 8 C -0.132 4.132 9 C -0.194 4.194 10 C -0.054 4.054 11 C -0.195 4.195 12 C 0.156 3.844 13 O -0.178 6.178 14 C -0.393 4.393 15 H 0.092 0.908 16 C 0.039 3.961 17 N -0.862 5.862 18 Si 0.941 3.059 19 H -0.273 1.273 20 H -0.277 1.277 21 H -0.268 1.268 22 C -0.235 4.235 23 C -0.065 4.065 24 H 0.121 0.879 25 H 0.112 0.888 26 H 0.087 0.913 27 H 0.049 0.951 28 H 0.348 0.652 29 H 0.046 0.954 30 H 0.055 0.945 31 H 0.062 0.938 32 H 0.120 0.880 33 H 0.116 0.884 34 H 0.270 0.730 35 H 0.126 0.874 36 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.596 6.158 17.640 19.814 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C -0.086 4.086 3 Cl -0.050 7.050 4 C -0.036 4.036 5 N -0.309 5.309 6 C 0.036 3.964 7 H 0.059 0.941 8 C -0.190 4.190 9 C -0.195 4.195 10 C -0.073 4.073 11 C -0.214 4.214 12 C 0.102 3.898 13 O -0.081 6.081 14 C -0.469 4.469 15 H 0.109 0.891 16 C -0.165 4.165 17 N -0.497 5.497 18 Si 0.765 3.235 19 H -0.199 1.199 20 H -0.202 1.202 21 H -0.192 1.192 22 C -0.254 4.254 23 C -0.083 4.083 24 H 0.138 0.862 25 H 0.130 0.870 26 H 0.105 0.895 27 H 0.067 0.933 28 H 0.168 0.832 29 H 0.065 0.935 30 H 0.074 0.926 31 H 0.082 0.918 32 H 0.138 0.862 33 H 0.134 0.866 34 H 0.080 0.920 35 H 0.144 0.856 36 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -5.854 6.759 17.398 19.561 hybrid contribution -0.718 -1.507 -0.356 1.707 sum -6.571 5.252 17.042 19.005 Atomic orbital electron populations 1.24051 0.93931 1.03654 1.00405 1.23326 0.93469 0.88459 1.03357 1.98377 1.78225 1.31715 1.96681 1.21142 0.96109 0.91154 0.95179 1.60577 1.30626 1.36431 1.03311 1.20147 0.94444 0.88552 0.93305 0.94065 1.21773 0.96445 1.01806 0.99010 1.19228 1.12550 0.93737 0.94032 1.20509 0.96666 0.98512 0.91596 1.20264 1.10626 0.94000 0.96524 1.19427 0.92095 0.93104 0.85183 1.83981 1.77315 1.26891 1.19899 1.21325 1.48576 0.79716 0.97264 0.89096 1.25291 0.96256 1.00303 0.94656 1.70043 1.42568 1.34268 1.02806 0.85717 0.78451 0.80559 0.78737 1.19885 1.20225 1.19201 1.21112 1.10666 1.00243 0.93418 1.20571 0.97943 0.94667 0.95165 0.86154 0.87006 0.89508 0.93290 0.83235 0.93544 0.92594 0.91845 0.86210 0.86564 0.92001 0.85645 0.87810 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -1.41 14.04 28.97 0.41 -1.01 16 2 C -0.06 -0.56 6.01 -36.07 -0.22 -0.78 16 3 Cl -0.08 -0.83 28.99 -51.86 -1.50 -2.34 16 4 C 0.09 0.90 5.80 -4.98 -0.03 0.87 16 5 N -0.68 -7.97 5.67 -109.22 -0.62 -8.59 16 6 C 0.14 1.86 2.82 -68.86 -0.19 1.66 16 7 H 0.04 0.50 7.66 -51.93 -0.40 0.11 16 8 C -0.13 -1.63 9.39 37.16 0.35 -1.28 16 9 C -0.19 -3.17 4.72 -104.57 -0.49 -3.66 16 10 C -0.05 -0.95 8.99 -39.61 -0.36 -1.31 16 11 C -0.19 -4.09 9.99 -39.39 -0.39 -4.49 16 12 C 0.16 3.74 6.65 -39.11 -0.26 3.48 16 13 O -0.18 -5.06 9.76 0.05 0.00 -5.06 16 14 C -0.39 -10.94 9.49 30.89 0.29 -10.65 16 15 H 0.09 2.34 5.20 -52.48 -0.27 2.07 16 16 C 0.04 1.08 5.49 -17.52 -0.10 0.98 16 17 N -0.86 -25.26 13.67 55.48 0.76 -24.50 16 18 Si 0.94 20.42 29.55 -169.99 -5.02 15.40 16 19 H -0.27 -5.78 7.11 56.52 0.40 -5.38 16 20 H -0.28 -5.90 7.11 56.52 0.40 -5.49 16 21 H -0.27 -5.58 7.11 56.52 0.40 -5.18 16 22 C -0.24 -5.03 9.17 -39.39 -0.36 -5.39 16 23 C -0.06 -1.15 9.66 -39.61 -0.38 -1.53 16 24 H 0.12 0.77 7.84 -52.49 -0.41 0.36 16 25 H 0.11 0.79 8.06 -52.49 -0.42 0.37 16 26 H 0.09 0.82 7.44 -51.93 -0.39 0.43 16 27 H 0.05 0.42 7.71 -51.93 -0.40 0.02 16 28 H 0.35 4.33 7.97 -39.29 -0.31 4.02 16 29 H 0.05 0.50 7.45 -51.93 -0.39 0.11 16 30 H 0.06 0.69 8.14 -51.93 -0.42 0.26 16 31 H 0.06 0.84 8.14 -51.93 -0.42 0.42 16 32 H 0.12 1.90 7.70 -52.49 -0.40 1.49 16 33 H 0.12 2.39 8.06 -52.48 -0.42 1.97 16 34 H 0.27 7.25 8.31 -40.82 -0.34 6.91 16 35 H 0.13 2.70 5.64 -52.49 -0.30 2.41 16 36 H 0.10 1.57 8.03 -52.49 -0.42 1.15 16 LS Contribution 324.55 15.07 4.89 4.89 Total: -1.00 -29.50 324.55 -7.75 -37.25 By element: Atomic # 1 Polarization: 10.57 SS G_CDS: -4.52 Total: 6.05 kcal Atomic # 6 Polarization: -21.36 SS G_CDS: -1.73 Total: -23.10 kcal Atomic # 7 Polarization: -33.24 SS G_CDS: 0.14 Total: -33.10 kcal Atomic # 8 Polarization: -5.06 SS G_CDS: 0.00 Total: -5.06 kcal Atomic # 14 Polarization: 20.42 SS G_CDS: -5.02 Total: 15.40 kcal Atomic # 17 Polarization: -0.83 SS G_CDS: -1.50 Total: -2.34 kcal Total LS contribution 4.89 Total: 4.89 kcal Total: -29.50 -7.75 -37.25 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000164632485.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.549 kcal (2) G-P(sol) polarization free energy of solvation -29.500 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.049 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.747 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.247 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.302 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds