Wall clock time and date at job start Tue Mar 31 2020 05:48:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 C 1.46506 * 120.00270 * 2 1 4 4 C 1.50697 * 109.46592 * 269.99943 * 3 2 1 5 5 H 1.07994 * 120.00494 * 359.97438 * 4 3 2 6 6 C 1.37880 * 119.99903 * 180.02562 * 4 3 2 7 7 N 1.31521 * 119.99748 * 359.97438 * 6 4 3 8 8 Si 1.86796 * 120.00413 * 179.97438 * 6 4 3 9 9 H 1.48494 * 109.47041 * 89.99534 * 8 6 4 10 10 H 1.48499 * 109.47407 * 209.99963 * 8 6 4 11 11 H 1.48501 * 109.46942 * 329.99744 * 8 6 4 12 12 C 1.34777 * 120.00145 * 179.97438 * 2 1 3 13 13 O 1.21571 * 120.00351 * 184.87126 * 12 2 1 14 14 C 1.47696 * 119.99649 * 4.60154 * 12 2 1 15 15 C 1.39656 * 120.16412 * 311.75805 * 14 12 2 16 16 C 1.37865 * 119.87651 * 179.79484 * 15 14 12 17 17 N 1.48021 * 119.89275 * 180.20807 * 16 15 14 18 18 O 1.21791 * 120.00161 * 180.27205 * 17 16 15 19 19 O 1.21806 * 119.99615 * 0.27684 * 17 16 15 20 20 C 1.38459 * 120.21310 * 0.48029 * 16 15 14 21 21 C 1.38200 * 120.34367 * 359.75024 * 20 16 15 22 22 C 1.38317 * 120.11621 * 0.02562 * 21 20 16 23 23 F 1.35101 * 120.11149 * 179.97438 * 22 21 20 24 24 H 1.09001 * 109.47489 * 264.91130 * 1 2 3 25 25 H 1.09003 * 109.47073 * 24.90869 * 1 2 3 26 26 H 1.08995 * 109.47637 * 144.90669 * 1 2 3 27 27 H 1.08995 * 109.47022 * 29.99564 * 3 2 1 28 28 H 1.09000 * 109.47198 * 149.99724 * 3 2 1 29 29 H 0.97002 * 120.00123 * 179.97438 * 7 6 4 30 30 H 1.08003 * 120.06589 * 0.02562 * 15 14 12 31 31 H 1.08002 * 119.82511 * 179.72700 * 20 16 15 32 32 H 1.08001 * 119.94129 * 180.02562 * 21 20 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4486 1.7036 -1.4208 5 1 2.0981 1.0957 -2.2417 6 6 3.1269 2.8773 -1.6729 7 7 3.5543 3.6175 -0.6732 8 14 3.4389 3.4161 -3.4340 9 1 2.3094 4.2593 -3.9011 10 1 4.6996 4.1985 -3.4964 11 1 3.5559 2.2188 -4.3046 12 6 2.1388 -1.1672 0.0005 13 8 3.3513 -1.1691 0.0899 14 6 1.4039 -2.4442 -0.1015 15 6 0.2968 -2.6840 0.7154 16 6 -0.3874 -3.8764 0.6122 17 7 -1.5636 -4.1290 1.4746 18 8 -2.1665 -5.1837 1.3886 19 8 -1.9285 -3.2820 2.2703 20 6 0.0254 -4.8407 -0.2916 21 6 1.1226 -4.6148 -1.1010 22 6 1.8166 -3.4216 -1.0123 23 9 2.8894 -3.2011 -1.8032 24 1 -0.3634 -0.0912 1.0236 25 1 -0.3633 0.9321 -0.4328 26 1 -0.3634 -0.8408 -0.5908 27 1 1.6084 2.0284 0.5137 28 1 3.1499 1.1384 0.5139 29 1 4.0319 4.4430 -0.8505 30 1 -0.0250 -1.9352 1.4241 31 1 -0.5126 -5.7743 -0.3641 32 1 1.4387 -5.3713 -1.8040 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000037286124.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:48:23 Heat of formation + Delta-G solvation = -46.441627 kcal Electronic energy + Delta-G solvation = -21765.799937 eV Core-core repulsion = 18030.992374 eV Total energy + Delta-G solvation = -3734.807564 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 282.085 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -49.34828 -42.39031 -40.15273 -38.39605 -36.76045 -35.17484 -32.95466 -31.96640 -31.88535 -27.98904 -26.62011 -26.31455 -24.52229 -23.26151 -22.33878 -20.27908 -18.95017 -18.50157 -17.99686 -17.74247 -16.91697 -16.71601 -16.63598 -16.03402 -15.42114 -14.90713 -14.50320 -14.40722 -14.03171 -13.76513 -13.16533 -13.09393 -12.60246 -12.27984 -12.20855 -11.88842 -11.68969 -11.43037 -11.33826 -11.32099 -11.02317 -10.71012 -10.29491 -9.90744 -9.77534 -9.64468 -9.38943 -8.54458 -7.93807 -6.15881 -4.21872 -0.49758 0.26190 0.97176 1.11367 2.54640 3.07238 3.23496 3.30698 3.34874 3.44653 3.58248 3.91732 4.07566 4.29448 4.34297 4.52825 4.77156 5.05272 5.17624 5.19180 5.23773 5.35254 5.39756 5.66805 5.82300 6.00991 6.15753 6.79961 7.21035 7.30196 7.43054 7.78631 8.04160 8.07325 8.56638 8.82853 9.43716 10.92318 Molecular weight = 282.08amu Principal moments of inertia in cm(-1) A = 0.024381 B = 0.004666 C = 0.004223 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1148.167481 B = 5998.775730 C = 6628.112180 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.074 3.926 2 N -0.586 5.586 3 C 0.244 3.756 4 C -0.534 4.534 5 H 0.058 0.942 6 C 0.064 3.936 7 N -0.892 5.892 8 Si 0.900 3.100 9 H -0.279 1.279 10 H -0.284 1.284 11 H -0.274 1.274 12 C 0.547 3.453 13 O -0.515 6.515 14 C -0.148 4.148 15 C 0.000 4.000 16 C -0.067 4.067 17 N 0.033 4.967 18 O -0.160 6.160 19 O -0.155 6.155 20 C -0.016 4.016 21 C -0.159 4.159 22 C 0.201 3.799 23 F -0.100 7.100 24 H 0.053 0.947 25 H 0.085 0.915 26 H 0.054 0.946 27 H 0.040 0.960 28 H 0.049 0.951 29 H 0.265 0.735 30 H 0.170 0.830 31 H 0.165 0.835 32 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.981 -15.625 0.464 18.028 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.317 5.317 3 C 0.125 3.875 4 C -0.572 4.572 5 H 0.076 0.924 6 C -0.139 4.139 7 N -0.530 5.530 8 Si 0.727 3.273 9 H -0.205 1.205 10 H -0.209 1.209 11 H -0.199 1.199 12 C 0.331 3.669 13 O -0.392 6.392 14 C -0.154 4.154 15 C -0.020 4.020 16 C -0.150 4.150 17 N 0.553 4.447 18 O -0.376 6.376 19 O -0.371 6.371 20 C -0.035 4.035 21 C -0.178 4.178 22 C 0.180 3.820 23 F -0.077 7.077 24 H 0.072 0.928 25 H 0.104 0.896 26 H 0.072 0.928 27 H 0.058 0.942 28 H 0.067 0.933 29 H 0.075 0.925 30 H 0.187 0.813 31 H 0.183 0.817 32 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -7.615 -15.258 0.113 17.053 hybrid contribution -0.004 0.356 -0.939 1.004 sum -7.619 -14.903 -0.826 16.758 Atomic orbital electron populations 1.21914 0.81073 1.03467 1.00569 1.48146 1.06440 1.07428 1.69646 1.19462 0.92792 0.77207 0.97990 1.21378 1.37240 1.06666 0.91962 0.92394 1.24928 0.95092 0.96242 0.97634 1.69926 1.37927 1.14309 1.30838 0.86466 0.77816 0.78653 0.84343 1.20508 1.20933 1.19863 1.17616 0.87127 0.82639 0.79500 1.90838 1.12736 1.86368 1.49245 1.20432 0.97902 0.97991 0.99046 1.21204 0.90097 0.94771 0.95884 1.20956 0.93552 0.99310 1.01192 1.43451 1.01121 1.00138 0.99980 1.94531 1.55040 1.14022 1.73979 1.94579 1.70377 1.40428 1.31751 1.20939 0.94033 0.98435 0.90100 1.21126 0.96505 0.97249 1.02911 1.18010 0.83589 0.92699 0.87685 1.91675 1.51202 1.94568 1.70287 0.92812 0.89633 0.92782 0.94240 0.93293 0.92506 0.81269 0.81705 0.81695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 1.10 9.05 59.84 0.54 1.64 16 2 N -0.59 -11.85 2.86 -184.14 -0.53 -12.37 16 3 C 0.24 6.12 5.18 -5.19 -0.03 6.09 16 4 C -0.53 -14.65 9.39 -34.44 -0.32 -14.97 16 5 H 0.06 1.59 7.81 -52.49 -0.41 1.18 16 6 C 0.06 1.77 5.46 -17.82 -0.10 1.68 16 7 N -0.89 -25.78 13.29 55.43 0.74 -25.04 16 8 Si 0.90 21.32 29.54 -169.99 -5.02 16.30 16 9 H -0.28 -6.42 7.11 56.52 0.40 -6.01 16 10 H -0.28 -6.68 7.11 56.52 0.40 -6.27 16 11 H -0.27 -6.48 7.11 56.52 0.40 -6.08 16 12 C 0.55 11.01 7.02 -12.40 -0.09 10.92 16 13 O -0.52 -12.61 16.17 5.30 0.09 -12.53 16 14 C -0.15 -2.21 4.92 -104.91 -0.52 -2.72 16 15 C 0.00 0.00 7.27 -39.19 -0.28 -0.28 16 16 C -0.07 -0.73 6.84 -80.00 -0.55 -1.28 16 17 N 0.03 0.41 4.45 33.94 0.15 0.56 16 18 O -0.16 -1.99 18.44 -29.46 -0.54 -2.53 16 19 O -0.15 -2.07 18.44 -29.46 -0.54 -2.62 16 20 C -0.02 -0.13 9.55 -39.51 -0.38 -0.51 16 21 C -0.16 -1.38 10.01 -39.57 -0.40 -1.78 16 22 C 0.20 2.64 7.26 -38.96 -0.28 2.36 16 23 F -0.10 -1.57 16.49 2.25 0.04 -1.53 16 24 H 0.05 0.66 7.04 -51.93 -0.37 0.30 16 25 H 0.08 1.30 8.03 -51.93 -0.42 0.89 16 26 H 0.05 0.70 6.25 -51.93 -0.32 0.37 16 27 H 0.04 0.99 8.07 -51.93 -0.42 0.57 16 28 H 0.05 1.38 7.36 -51.93 -0.38 1.00 16 29 H 0.27 7.24 8.31 -40.82 -0.34 6.90 16 30 H 0.17 1.95 5.76 -52.48 -0.30 1.65 16 31 H 0.17 0.96 7.60 -52.49 -0.40 0.56 16 32 H 0.17 0.89 8.06 -52.49 -0.42 0.47 16 LS Contribution 297.21 15.07 4.48 4.48 Total: -1.00 -32.49 297.21 -6.12 -38.61 By element: Atomic # 1 Polarization: -1.90 SS G_CDS: -2.58 Total: -4.48 kcal Atomic # 6 Polarization: 3.54 SS G_CDS: -2.40 Total: 1.14 kcal Atomic # 7 Polarization: -37.22 SS G_CDS: 0.36 Total: -36.86 kcal Atomic # 8 Polarization: -16.67 SS G_CDS: -1.00 Total: -17.67 kcal Atomic # 9 Polarization: -1.57 SS G_CDS: 0.04 Total: -1.53 kcal Atomic # 14 Polarization: 21.32 SS G_CDS: -5.02 Total: 16.30 kcal Total LS contribution 4.48 Total: 4.48 kcal Total: -32.49 -6.12 -38.61 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000037286124.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.829 kcal (2) G-P(sol) polarization free energy of solvation -32.494 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.323 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.119 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.612 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.442 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds