Wall clock time and date at job start Tue Mar 31 2020 06:33:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38126 * 120.03095 * 2 1 4 4 C 1.38358 * 120.05924 * 179.97438 * 3 2 1 5 5 Cl 1.73604 * 119.94418 * 179.97438 * 4 3 2 6 6 C 1.38408 * 120.11359 * 0.02562 * 4 3 2 7 7 C 1.38083 * 120.05894 * 359.95377 * 6 4 3 8 8 C 1.38846 * 120.02766 * 179.97438 * 2 1 3 9 9 N 1.39973 * 120.05492 * 359.74619 * 8 2 1 10 10 C 1.34785 * 119.99975 * 145.72066 * 9 8 2 11 11 O 1.21286 * 119.99748 * 4.19220 * 10 9 8 12 12 C 1.50692 * 120.00001 * 184.19863 * 10 9 8 13 13 N 1.46499 * 109.47020 * 179.97438 * 12 10 9 14 14 C 1.46506 * 119.99681 * 89.99993 * 13 12 10 15 15 C 1.36931 * 120.00537 * 269.99994 * 13 12 10 16 16 H 1.08004 * 119.99467 * 24.86938 * 15 13 12 17 17 C 1.38816 * 120.00486 * 204.86816 * 15 13 12 18 18 N 1.31620 * 119.99686 * 5.71671 * 17 15 13 19 19 Si 1.86801 * 120.00051 * 185.71132 * 17 15 13 20 20 H 1.48493 * 109.47003 * 90.00367 * 19 17 15 21 21 H 1.48503 * 109.46799 * 210.00222 * 19 17 15 22 22 H 1.48497 * 109.47217 * 329.99870 * 19 17 15 23 23 H 1.08992 * 109.47046 * 270.01969 * 1 2 3 24 24 H 1.08997 * 109.47096 * 30.02478 * 1 2 3 25 25 H 1.09005 * 109.47210 * 150.02086 * 1 2 3 26 26 H 1.08005 * 119.97045 * 359.97438 * 3 2 1 27 27 H 1.08005 * 119.96948 * 179.97438 * 6 4 3 28 28 H 1.08001 * 120.03294 * 180.02562 * 7 6 4 29 29 H 0.97002 * 120.00605 * 325.71080 * 9 8 2 30 30 H 1.08996 * 109.47193 * 299.99581 * 12 10 9 31 31 H 1.09004 * 109.47547 * 59.99777 * 12 10 9 32 32 H 1.09000 * 109.47181 * 95.02565 * 14 13 12 33 33 H 1.09000 * 109.47045 * 215.01977 * 14 13 12 34 34 H 1.08998 * 109.47488 * 335.02066 * 14 13 12 35 35 H 0.96998 * 119.99973 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1983 1.1958 0.0000 4 6 3.5819 1.1965 0.0005 5 17 4.4477 2.7012 -0.0001 6 6 4.2769 -0.0004 0.0005 7 6 3.5907 -1.1987 0.0010 8 6 2.2018 -1.2021 0.0005 9 7 1.5037 -2.4153 0.0064 10 6 2.0011 -3.4822 -0.6501 11 8 3.0890 -3.4139 -1.1818 12 6 1.2053 -4.7598 -0.7236 13 7 1.9568 -5.7600 -1.4858 14 6 2.8814 -6.6635 -0.7965 15 6 1.7951 -5.8505 -2.8426 16 1 1.4625 -4.9906 -3.4052 17 6 2.0588 -7.0471 -3.4948 18 7 2.3549 -8.1245 -2.7991 19 14 1.9931 -7.1285 -5.3599 20 1 3.3341 -6.8169 -5.9164 21 1 1.5870 -8.4932 -5.7818 22 1 1.0060 -6.1403 -5.8641 23 1 -0.3633 0.0004 1.0276 24 1 -0.3633 0.8897 -0.5142 25 1 -0.3634 -0.8902 -0.5135 26 1 1.6583 2.1312 -0.0004 27 1 5.3569 0.0028 0.0005 28 1 4.1334 -2.1324 0.0014 29 1 0.6621 -2.4884 0.4831 30 1 1.0227 -5.1325 0.2843 31 1 0.2531 -4.5669 -1.2178 32 1 2.3722 -7.6000 -0.5687 33 1 3.7399 -6.8634 -1.4378 34 1 3.2202 -6.1994 0.1297 35 1 2.5395 -8.9606 -3.2548 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068972578.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:33:01 Heat of formation + Delta-G solvation = 9.802996 kcal Electronic energy + Delta-G solvation = -19480.539518 eV Core-core repulsion = 16312.340374 eV Total energy + Delta-G solvation = -3168.199144 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -40.37149 -38.42877 -36.55913 -35.24070 -34.30074 -32.64380 -31.39339 -29.71872 -27.47917 -26.60530 -25.82086 -23.17055 -21.85186 -21.12316 -19.89502 -17.70713 -16.77201 -16.60720 -16.20597 -15.49186 -14.88157 -14.54802 -14.11574 -13.98118 -13.59645 -13.33630 -13.27059 -12.87621 -12.85776 -12.76928 -11.90400 -11.79711 -11.68865 -11.43794 -11.20368 -10.89842 -10.88842 -10.72856 -10.42092 -10.05248 -9.96970 -9.90727 -9.33177 -8.83944 -8.55755 -7.91047 -6.83573 -5.76833 -3.26453 1.12447 1.28123 2.12245 3.12642 3.31969 3.40726 3.44493 3.46140 3.70583 4.47275 4.66815 4.78424 5.05477 5.16567 5.29721 5.42204 5.44703 5.46844 5.50718 5.68093 5.80606 5.98505 6.02695 6.08407 6.18041 6.26386 6.38646 6.53140 6.73495 7.03041 7.40784 7.67213 7.72970 7.79921 8.32792 8.69810 9.17586 9.76698 10.23997 11.27911 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.025569 B = 0.003716 C = 0.003613 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1094.834311 B = 7533.977887 C = 7749.000267 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.113 4.113 3 C -0.094 4.094 4 C -0.057 4.057 5 Cl -0.083 7.083 6 C -0.096 4.096 7 C -0.111 4.111 8 C 0.167 3.833 9 N -0.686 5.686 10 C 0.472 3.528 11 O -0.500 6.500 12 C 0.137 3.863 13 N -0.574 5.574 14 C 0.165 3.835 15 C -0.255 4.255 16 H 0.066 0.934 17 C 0.007 3.993 18 N -0.908 5.908 19 Si 0.910 3.090 20 H -0.287 1.287 21 H -0.289 1.289 22 H -0.279 1.279 23 H 0.071 0.929 24 H 0.070 0.930 25 H 0.070 0.930 26 H 0.131 0.869 27 H 0.132 0.868 28 H 0.150 0.850 29 H 0.407 0.593 30 H 0.073 0.927 31 H 0.083 0.917 32 H 0.035 0.965 33 H 0.047 0.953 34 H -0.006 1.006 35 H 0.254 0.746 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.175 16.724 9.485 19.487 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.116 4.116 3 C -0.113 4.113 4 C -0.084 4.084 5 Cl -0.054 7.054 6 C -0.115 4.115 7 C -0.131 4.131 8 C 0.070 3.930 9 N -0.334 5.334 10 C 0.258 3.742 11 O -0.371 6.371 12 C 0.004 3.996 13 N -0.293 5.293 14 C 0.021 3.979 15 C -0.384 4.384 16 H 0.084 0.916 17 C -0.191 4.191 18 N -0.553 5.553 19 Si 0.740 3.260 20 H -0.213 1.213 21 H -0.216 1.216 22 H -0.204 1.204 23 H 0.090 0.910 24 H 0.089 0.911 25 H 0.089 0.911 26 H 0.149 0.851 27 H 0.150 0.850 28 H 0.167 0.833 29 H 0.242 0.758 30 H 0.091 0.909 31 H 0.101 0.899 32 H 0.054 0.946 33 H 0.066 0.934 34 H 0.013 0.987 35 H 0.064 0.936 Dipole moment (debyes) X Y Z Total from point charges -2.270 16.520 8.960 18.930 hybrid contribution -0.136 0.198 -0.849 0.882 sum -2.406 16.717 8.111 18.736 Atomic orbital electron populations 1.20717 0.90383 1.03426 1.02370 1.19625 0.96351 0.91215 1.04384 1.20634 0.91752 0.97873 1.01070 1.20783 0.92312 0.86692 1.08613 1.98344 1.77093 1.32789 1.97217 1.20944 1.00388 0.90259 0.99928 1.21351 0.92901 0.98922 0.99935 1.17855 0.91483 0.85738 0.97881 1.44289 1.25912 1.09431 1.53727 1.24127 0.88356 0.85760 0.75996 1.90633 1.20938 1.82341 1.43182 1.20688 0.94413 0.86845 0.97704 1.43611 1.45953 1.35221 1.04500 1.20886 0.93228 0.91740 0.92059 1.19149 1.42073 0.94910 0.82290 0.91587 1.25061 1.00585 0.95077 0.98375 1.70056 1.51587 0.99854 1.33756 0.86167 0.77979 0.76846 0.84997 1.21346 1.21562 1.20418 0.91023 0.91136 0.91107 0.85066 0.84995 0.83270 0.75782 0.90935 0.89882 0.94630 0.93407 0.98721 0.93603 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.97 9.47 36.01 0.34 -0.63 16 2 C -0.11 -1.33 5.90 -104.44 -0.62 -1.95 16 3 C -0.09 -1.08 9.48 -39.58 -0.38 -1.46 16 4 C -0.06 -0.71 6.32 -39.47 -0.25 -0.96 16 5 Cl -0.08 -0.94 28.95 -51.86 -1.50 -2.44 16 6 C -0.10 -1.29 9.82 -39.58 -0.39 -1.68 16 7 C -0.11 -1.70 8.70 -39.40 -0.34 -2.05 16 8 C 0.17 2.38 6.29 -83.68 -0.53 1.85 16 9 N -0.69 -9.49 4.76 -9.86 -0.05 -9.53 16 10 C 0.47 8.71 7.74 -10.99 -0.09 8.62 16 11 O -0.50 -11.46 13.84 5.55 0.08 -11.38 16 12 C 0.14 2.59 6.13 -5.20 -0.03 2.56 16 13 N -0.57 -14.38 2.41 -182.50 -0.44 -14.82 16 14 C 0.17 4.12 8.95 59.85 0.54 4.66 16 15 C -0.25 -7.08 9.66 -15.06 -0.15 -7.22 16 16 H 0.07 1.83 7.84 -52.48 -0.41 1.42 16 17 C 0.01 0.21 5.24 -17.43 -0.09 0.11 16 18 N -0.91 -26.31 10.45 55.49 0.58 -25.73 16 19 Si 0.91 22.16 29.56 -169.99 -5.02 17.14 16 20 H -0.29 -7.07 7.11 56.52 0.40 -6.67 16 21 H -0.29 -7.00 7.11 56.52 0.40 -6.60 16 22 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 23 H 0.07 0.50 8.14 -51.93 -0.42 0.07 16 24 H 0.07 0.54 8.09 -51.93 -0.42 0.12 16 25 H 0.07 0.62 7.17 -51.93 -0.37 0.25 16 26 H 0.13 1.22 8.06 -52.48 -0.42 0.80 16 27 H 0.13 1.58 8.06 -52.48 -0.42 1.16 16 28 H 0.15 2.61 6.19 -52.49 -0.32 2.28 16 29 H 0.41 4.09 7.84 -40.82 -0.32 3.77 16 30 H 0.07 1.16 8.07 -51.93 -0.42 0.74 16 31 H 0.08 1.45 8.04 -51.93 -0.42 1.03 16 32 H 0.04 0.92 7.35 -51.93 -0.38 0.54 16 33 H 0.05 1.32 7.26 -51.93 -0.38 0.94 16 34 H -0.01 -0.13 8.03 -51.93 -0.42 -0.55 16 35 H 0.25 7.12 8.31 -40.82 -0.34 6.78 16 LS Contribution 313.43 15.07 4.72 4.72 Total: -1.00 -32.42 313.43 -7.87 -40.29 By element: Atomic # 1 Polarization: 4.15 SS G_CDS: -4.26 Total: -0.11 kcal Atomic # 6 Polarization: 3.84 SS G_CDS: -1.98 Total: 1.86 kcal Atomic # 7 Polarization: -50.17 SS G_CDS: 0.09 Total: -50.08 kcal Atomic # 8 Polarization: -11.46 SS G_CDS: 0.08 Total: -11.38 kcal Atomic # 14 Polarization: 22.16 SS G_CDS: -5.02 Total: 17.14 kcal Atomic # 17 Polarization: -0.94 SS G_CDS: -1.50 Total: -2.44 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -32.42 -7.87 -40.29 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068972578.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.094 kcal (2) G-P(sol) polarization free energy of solvation -32.420 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.675 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.872 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.291 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.803 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds