Wall clock time and date at job start Tue Mar 31 2020 06:30:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38254 * 120.03873 * 2 1 4 4 Cl 1.73598 * 119.97918 * 0.02562 * 3 2 1 5 5 C 1.38377 * 120.04199 * 179.97438 * 3 2 1 6 6 C 1.38277 * 120.12634 * 0.02562 * 5 3 2 7 7 C 1.38093 * 120.08663 * 359.71989 * 6 5 3 8 8 C 1.38814 * 120.04158 * 180.02562 * 2 1 3 9 9 N 1.39946 * 120.06695 * 359.97438 * 8 2 1 10 10 C 1.34777 * 120.00056 * 155.45595 * 9 8 2 11 11 O 1.21581 * 120.00109 * 354.37581 * 10 9 8 12 12 N 1.34772 * 119.99620 * 174.37836 * 10 9 8 13 13 C 1.46502 * 119.99891 * 179.72118 * 12 10 9 14 14 H 1.08998 * 109.47124 * 325.27727 * 13 12 10 15 15 C 1.52997 * 109.47222 * 85.27553 * 13 12 10 16 16 C 1.50699 * 109.47241 * 205.27447 * 13 12 10 17 17 H 1.07994 * 119.99944 * 0.02562 * 16 13 12 18 18 C 1.37882 * 120.00025 * 180.02562 * 16 13 12 19 19 N 1.31521 * 119.99844 * 359.97438 * 18 16 13 20 20 Si 1.86795 * 120.00156 * 180.02562 * 18 16 13 21 21 H 1.48507 * 109.46979 * 359.97438 * 20 18 16 22 22 H 1.48498 * 109.47363 * 119.99503 * 20 18 16 23 23 H 1.48493 * 109.47115 * 239.99847 * 20 18 16 24 24 H 1.09006 * 109.47385 * 269.98060 * 1 2 3 25 25 H 1.08996 * 109.47382 * 29.97555 * 1 2 3 26 26 H 1.09000 * 109.46941 * 149.98421 * 1 2 3 27 27 H 1.08001 * 119.93443 * 180.02562 * 5 3 2 28 28 H 1.08006 * 119.95442 * 180.02562 * 6 5 3 29 29 H 1.08001 * 120.02982 * 180.27745 * 7 6 5 30 30 H 0.96996 * 119.99491 * 335.44831 * 9 8 2 31 31 H 0.96999 * 120.00716 * 359.97438 * 12 10 9 32 32 H 1.08997 * 109.47633 * 180.02562 * 15 13 12 33 33 H 1.09008 * 109.47180 * 300.00557 * 15 13 12 34 34 H 1.09004 * 109.47351 * 59.99918 * 15 13 12 35 35 H 0.96992 * 119.99821 * 179.97438 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1991 1.1968 0.0000 4 17 1.3316 2.7005 0.0007 5 6 3.5828 1.1969 0.0005 6 6 4.2769 0.0010 0.0005 7 6 3.5910 -1.1975 0.0058 8 6 2.2019 -1.2017 -0.0005 9 7 1.5045 -2.4149 -0.0005 10 6 2.0890 -3.5282 -0.4859 11 8 3.1807 -3.4597 -1.0165 12 7 1.4631 -4.7173 -0.3830 13 6 2.0956 -5.9265 -0.9160 14 1 2.6564 -5.6764 -1.8165 15 6 3.0465 -6.5088 0.1317 16 6 1.0344 -6.9427 -1.2510 17 1 -0.0071 -6.7108 -1.0840 18 6 1.3930 -8.1684 -1.7707 19 7 2.6614 -8.4506 -1.9744 20 14 0.0776 -9.4277 -2.1866 21 1 -1.2609 -8.8693 -1.8669 22 1 0.1452 -9.7547 -3.6335 23 1 0.3025 -10.6602 -1.3895 24 1 -0.3634 -0.0003 1.0277 25 1 -0.3634 0.8902 -0.5134 26 1 -0.3633 -0.8898 -0.5141 27 1 4.1217 2.1329 0.0010 28 1 5.3570 0.0043 0.0014 29 1 4.1341 -2.1311 0.0104 30 1 0.6005 -2.4546 0.3489 31 1 0.5922 -4.7721 0.0406 32 1 3.5175 -7.4082 -0.2650 33 1 3.8142 -5.7738 0.3741 34 1 2.4858 -6.7589 1.0323 35 1 2.9137 -9.3129 -2.3397 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000153259477.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:30:49 Heat of formation + Delta-G solvation = -15.358727 kcal Electronic energy + Delta-G solvation = -19428.348387 eV Core-core repulsion = 16259.058149 eV Total energy + Delta-G solvation = -3169.290238 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -40.49183 -38.67026 -36.56429 -35.15381 -34.42849 -32.54863 -32.39202 -29.86854 -28.37997 -26.85070 -25.30636 -23.25593 -21.65816 -21.00814 -19.93300 -18.31471 -17.69292 -16.19314 -15.80454 -15.48846 -15.14442 -14.75409 -14.39402 -14.08294 -14.02909 -13.36801 -13.33920 -12.60949 -12.51168 -12.46101 -11.94504 -11.74252 -11.58076 -11.51466 -11.13679 -11.03278 -10.85967 -10.79736 -10.36254 -10.28690 -10.18916 -9.43622 -9.10317 -8.63022 -8.59858 -8.17858 -7.76770 -6.17715 -4.27071 1.22297 1.29660 2.04014 3.09081 3.20745 3.29101 3.31655 3.48190 3.93121 4.28108 4.69182 4.81875 4.86719 5.05759 5.15305 5.37940 5.47526 5.48803 5.58892 5.67659 5.99398 6.19067 6.30432 6.42442 6.57996 6.73807 6.91018 7.04053 7.07353 7.15918 7.37034 7.56806 7.75753 7.91826 8.09291 8.64337 8.76346 9.12024 9.40966 10.88412 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.036739 B = 0.003460 C = 0.003233 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 761.951938 B = 8091.608517 C = 8659.192082 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.124 4.124 3 C -0.015 4.015 4 Cl -0.076 7.076 5 C -0.140 4.140 6 C -0.091 4.091 7 C -0.125 4.125 8 C 0.198 3.802 9 N -0.689 5.689 10 C 0.692 3.308 11 O -0.578 6.578 12 N -0.716 5.716 13 C 0.279 3.721 14 H 0.051 0.949 15 C -0.148 4.148 16 C -0.535 4.535 17 H 0.062 0.938 18 C 0.066 3.934 19 N -0.882 5.882 20 Si 0.903 3.097 21 H -0.273 1.273 22 H -0.282 1.282 23 H -0.282 1.282 24 H 0.072 0.928 25 H 0.075 0.925 26 H 0.068 0.932 27 H 0.129 0.871 28 H 0.132 0.868 29 H 0.157 0.843 30 H 0.404 0.596 31 H 0.387 0.613 32 H 0.091 0.909 33 H 0.015 0.985 34 H 0.026 0.974 35 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.751 17.069 6.120 18.341 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.128 4.128 3 C -0.042 4.042 4 Cl -0.047 7.047 5 C -0.160 4.160 6 C -0.110 4.110 7 C -0.146 4.146 8 C 0.100 3.900 9 N -0.336 5.336 10 C 0.393 3.607 11 O -0.456 6.456 12 N -0.367 5.367 13 C 0.178 3.822 14 H 0.068 0.932 15 C -0.207 4.207 16 C -0.573 4.573 17 H 0.080 0.920 18 C -0.137 4.137 19 N -0.520 5.520 20 Si 0.731 3.269 21 H -0.197 1.197 22 H -0.208 1.208 23 H -0.208 1.208 24 H 0.091 0.909 25 H 0.094 0.906 26 H 0.087 0.913 27 H 0.147 0.853 28 H 0.150 0.850 29 H 0.175 0.825 30 H 0.239 0.761 31 H 0.219 0.781 32 H 0.110 0.890 33 H 0.034 0.966 34 H 0.045 0.955 35 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -1.731 16.916 5.543 17.885 hybrid contribution -1.596 -0.627 0.107 1.719 sum -3.327 16.289 5.650 17.559 Atomic orbital electron populations 1.20761 0.90385 1.03563 1.02592 1.19288 0.96486 0.90272 1.06767 1.20384 0.92056 0.85761 1.05989 1.98337 1.77202 1.32175 1.96998 1.20908 0.91703 0.99112 1.04239 1.20994 1.00108 0.91129 0.98761 1.21695 0.92692 1.00350 0.99877 1.17240 0.91263 0.83826 0.97647 1.42915 1.18623 1.06680 1.65380 1.16157 0.84683 0.80418 0.79478 1.90843 1.20557 1.85052 1.49103 1.45913 1.22427 1.06553 1.61782 1.18726 0.92155 0.78492 0.92876 0.93158 1.22106 0.98340 1.01802 0.98416 1.21234 0.92846 0.99277 1.43986 0.91992 1.24884 0.95679 0.98080 0.95050 1.69909 1.15359 1.23013 1.43678 0.86369 0.81429 0.80988 0.78159 1.19746 1.20830 1.20842 0.90917 0.90613 0.91339 0.85339 0.84995 0.82546 0.76054 0.78074 0.89014 0.96574 0.95451 0.92542 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.18 9.05 36.01 0.33 -0.86 16 2 C -0.12 -1.58 5.90 -104.40 -0.62 -2.20 16 3 C -0.01 -0.18 6.31 -39.52 -0.25 -0.43 16 4 Cl -0.08 -0.81 27.29 -51.86 -1.42 -2.22 16 5 C -0.14 -1.63 9.83 -39.52 -0.39 -2.02 16 6 C -0.09 -1.15 10.04 -39.62 -0.40 -1.54 16 7 C -0.13 -1.94 8.72 -39.39 -0.34 -2.28 16 8 C 0.20 2.95 6.41 -83.69 -0.54 2.41 16 9 N -0.69 -10.32 4.99 -14.23 -0.07 -10.39 16 10 C 0.69 13.50 8.33 -86.92 -0.72 12.78 16 11 O -0.58 -13.35 13.17 5.29 0.07 -13.28 16 12 N -0.72 -14.32 5.07 -59.82 -0.30 -14.62 16 13 C 0.28 6.90 2.56 -69.08 -0.18 6.73 16 14 H 0.05 1.44 7.57 -51.93 -0.39 1.05 16 15 C -0.15 -3.58 9.26 37.16 0.34 -3.24 16 16 C -0.53 -13.81 8.73 -34.44 -0.30 -14.11 16 17 H 0.06 1.53 7.74 -52.49 -0.41 1.12 16 18 C 0.07 1.75 5.30 -17.82 -0.09 1.66 16 19 N -0.88 -24.38 11.32 55.43 0.63 -23.75 16 20 Si 0.90 20.25 29.54 -169.99 -5.02 15.22 16 21 H -0.27 -5.98 7.11 56.52 0.40 -5.57 16 22 H -0.28 -6.37 7.11 56.52 0.40 -5.96 16 23 H -0.28 -6.30 7.11 56.52 0.40 -5.89 16 24 H 0.07 0.63 8.14 -51.93 -0.42 0.21 16 25 H 0.08 0.74 6.90 -51.93 -0.36 0.38 16 26 H 0.07 0.67 6.98 -51.93 -0.36 0.31 16 27 H 0.13 1.21 8.06 -52.49 -0.42 0.79 16 28 H 0.13 1.35 8.06 -52.48 -0.42 0.92 16 29 H 0.16 2.79 5.79 -52.49 -0.30 2.49 16 30 H 0.40 4.70 7.41 -40.82 -0.30 4.40 16 31 H 0.39 6.56 8.56 -40.82 -0.35 6.21 16 32 H 0.09 2.42 6.07 -51.93 -0.32 2.11 16 33 H 0.02 0.36 8.14 -51.92 -0.42 -0.06 16 34 H 0.03 0.61 8.14 -51.93 -0.42 0.19 16 35 H 0.26 6.92 8.31 -40.82 -0.34 6.58 16 LS Contribution 309.01 15.07 4.66 4.66 Total: -1.00 -29.57 309.01 -8.65 -38.22 By element: Atomic # 1 Polarization: 13.31 SS G_CDS: -4.04 Total: 9.27 kcal Atomic # 6 Polarization: 0.05 SS G_CDS: -3.16 Total: -3.11 kcal Atomic # 7 Polarization: -49.02 SS G_CDS: 0.25 Total: -48.76 kcal Atomic # 8 Polarization: -13.35 SS G_CDS: 0.07 Total: -13.28 kcal Atomic # 14 Polarization: 20.25 SS G_CDS: -5.02 Total: 15.22 kcal Atomic # 17 Polarization: -0.81 SS G_CDS: -1.42 Total: -2.22 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -29.57 -8.65 -38.22 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000153259477.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.866 kcal (2) G-P(sol) polarization free energy of solvation -29.570 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.705 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.654 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.224 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.359 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds