Wall clock time and date at job start Tue Mar 31 2020 05:45:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 N 1.46505 * 109.46953 * 2 1 4 4 C 1.33317 * 119.99943 * 283.73066 * 3 2 1 5 5 H 1.08007 * 119.99936 * 164.89861 * 4 3 2 6 6 C 1.46789 * 120.00431 * 344.90304 * 4 3 2 7 7 N 1.29315 * 119.99562 * 25.24193 * 6 4 3 8 8 Si 1.86800 * 120.00402 * 205.24505 * 6 4 3 9 9 H 1.48506 * 109.46852 * 359.97438 * 8 6 4 10 10 H 1.48497 * 109.47179 * 119.99403 * 8 6 4 11 11 H 1.48493 * 109.47215 * 239.99890 * 8 6 4 12 12 C 1.34774 * 119.99715 * 103.73524 * 3 2 1 13 13 O 1.21499 * 119.99387 * 187.21631 * 12 3 2 14 14 C 1.47531 * 120.00434 * 7.21803 * 12 3 2 15 15 C 1.39762 * 120.17054 * 319.87900 * 14 12 3 16 16 C 1.37825 * 119.86470 * 179.97438 * 15 14 12 17 17 N 1.48010 * 119.88096 * 180.02562 * 16 15 14 18 18 O 1.31700 * 120.00403 * 359.97438 * 17 16 15 19 19 O 1.31696 * 119.99939 * 180.02562 * 17 16 15 20 20 C 1.38487 * 120.23073 * 0.02562 * 16 15 14 21 21 C 1.38212 * 120.35847 * 0.02562 * 20 16 15 22 22 C 1.38305 * 120.12720 * 359.97438 * 21 20 16 23 23 F 1.35104 * 120.11893 * 180.27666 * 22 21 20 24 24 H 1.08999 * 109.47307 * 307.80457 * 1 2 3 25 25 H 1.08999 * 109.47468 * 67.81183 * 1 2 3 26 26 H 1.09000 * 109.47196 * 187.80965 * 1 2 3 27 27 H 1.08999 * 109.47594 * 240.00439 * 2 1 3 28 28 H 1.09000 * 109.47474 * 119.99982 * 2 1 3 29 29 H 0.97001 * 119.99677 * 180.02562 * 7 6 4 30 30 H 1.07992 * 120.06827 * 359.95923 * 15 14 12 31 31 H 1.07995 * 119.82047 * 180.02562 * 20 16 15 32 32 H 1.08007 * 119.93924 * 180.02562 * 21 20 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 7 2.0182 1.3813 0.0000 4 6 1.9820 2.1011 -1.1216 5 1 2.1059 3.1732 -1.0794 6 6 1.7737 1.4366 -2.4138 7 7 1.1586 0.3003 -2.4647 8 14 2.3973 2.2324 -3.9846 9 1 3.0612 3.5199 -3.6574 10 1 3.3710 1.3268 -4.6455 11 1 1.2549 2.4837 -4.8994 12 6 2.5041 1.9242 1.1338 13 8 2.7865 3.1054 1.1692 14 6 2.6931 1.0843 2.3319 15 6 1.7420 0.1173 2.6690 16 6 1.9251 -0.6642 3.7894 17 7 0.9184 -1.6889 4.1463 18 8 -0.1502 -1.8522 3.3942 19 8 1.0908 -2.4365 5.2167 20 6 3.0478 -0.4941 4.5823 21 6 3.9937 0.4601 4.2583 22 6 3.8248 1.2524 3.1374 23 9 4.7523 2.1813 2.8178 24 1 -0.3634 0.6299 0.8119 25 1 -0.3634 0.3881 -0.9515 26 1 -0.3633 -1.0181 0.1396 27 1 1.8933 -0.5137 -0.8900 28 1 1.8933 -0.5138 0.8900 29 1 1.0213 -0.1390 -3.3186 30 1 0.8653 -0.0172 2.0529 31 1 3.1848 -1.1104 5.4585 32 1 4.8669 0.5867 4.8812 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000227416207.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:45:07 Heat of formation + Delta-G solvation = 10.583001 kcal Electronic energy + Delta-G solvation = -22375.921181 eV Core-core repulsion = 18643.586391 eV Total energy + Delta-G solvation = -3732.334790 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 282.085 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -48.83390 -40.30709 -38.84075 -37.56567 -35.43541 -34.30175 -32.79482 -31.46281 -31.28623 -29.79305 -26.30949 -25.62092 -23.69685 -22.40640 -22.25630 -20.15681 -18.22339 -18.01720 -17.65695 -17.16224 -16.47311 -16.17703 -15.87868 -15.44387 -15.09745 -14.59135 -14.32925 -14.02556 -13.57594 -13.53572 -12.86511 -12.74694 -12.55207 -12.07747 -11.63552 -11.46551 -11.38733 -11.13695 -11.05532 -10.99344 -10.65602 -10.55655 -10.50655 -10.29435 -9.30280 -9.14284 -9.10715 -8.62823 -8.44486 -6.99089 -3.89883 -0.59221 0.69826 1.09899 1.23865 2.77993 2.99375 3.01930 3.07599 3.69845 3.80969 3.99993 4.31929 4.34611 4.51982 4.63472 4.80650 5.07362 5.15106 5.54896 5.64274 5.68799 5.84104 5.88584 5.92879 6.27110 6.32048 6.46967 6.58842 6.71321 6.89985 7.10099 7.30924 7.67745 8.04312 8.75929 8.99651 9.72797 9.93667 Molecular weight = 282.08amu Principal moments of inertia in cm(-1) A = 0.019507 B = 0.006319 C = 0.004997 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1435.046954 B = 4430.107349 C = 5601.693926 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.079 3.921 3 N -0.381 5.381 4 C -0.323 4.323 5 H 0.120 0.880 6 C 0.046 3.954 7 N -0.802 5.802 8 Si 0.929 3.071 9 H -0.257 1.257 10 H -0.273 1.273 11 H -0.275 1.275 12 C 0.420 3.580 13 O -0.589 6.589 14 C -0.118 4.118 15 C -0.028 4.028 16 C -0.023 4.023 17 N -0.010 5.010 18 O -0.170 6.170 19 O -0.185 6.185 20 C -0.047 4.047 21 C -0.155 4.155 22 C 0.178 3.822 23 F -0.106 7.106 24 H 0.033 0.967 25 H 0.093 0.907 26 H 0.051 0.949 27 H 0.116 0.884 28 H 0.048 0.952 29 H 0.285 0.715 30 H 0.178 0.822 31 H 0.159 0.841 32 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.909 -4.098 5.985 7.815 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.044 4.044 3 N -0.092 5.092 4 C -0.452 4.452 5 H 0.137 0.863 6 C -0.169 4.169 7 N -0.433 5.433 8 Si 0.753 3.247 9 H -0.181 1.181 10 H -0.198 1.198 11 H -0.201 1.201 12 C 0.214 3.786 13 O -0.478 6.478 14 C -0.124 4.124 15 C -0.049 4.049 16 C -0.110 4.110 17 N 0.468 4.532 18 O -0.365 6.365 19 O -0.376 6.376 20 C -0.067 4.067 21 C -0.175 4.175 22 C 0.156 3.844 23 F -0.083 7.083 24 H 0.051 0.949 25 H 0.111 0.889 26 H 0.070 0.930 27 H 0.133 0.867 28 H 0.066 0.934 29 H 0.097 0.903 30 H 0.195 0.805 31 H 0.176 0.824 32 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 3.402 -3.229 5.604 7.308 hybrid contribution -0.022 -0.135 -0.620 0.635 sum 3.379 -3.364 4.984 6.897 Atomic orbital electron populations 1.22055 0.95229 1.00247 1.03127 1.22513 0.95684 0.83802 1.02394 1.42819 1.46031 1.11813 1.08518 1.20838 1.48693 0.93771 0.81914 0.86271 1.27107 0.94309 0.95107 1.00410 1.69099 1.29583 1.16167 1.28499 0.85810 0.79343 0.80401 0.79107 1.18087 1.19824 1.20084 1.16913 0.90772 0.87907 0.83050 1.90630 1.59528 1.14608 1.83053 1.20397 0.94337 0.98585 0.99125 1.21786 1.00248 0.90340 0.92492 1.20223 0.92522 0.96699 1.01540 1.50399 1.01910 1.00354 1.00558 1.96296 1.15883 1.76079 1.48218 1.96233 1.84540 1.43851 1.13024 1.20742 0.90260 0.96910 0.98802 1.20974 1.01693 0.97081 0.97730 1.17939 0.86064 0.86992 0.93386 1.91601 1.62566 1.62221 1.91948 0.94854 0.88881 0.92968 0.86658 0.93379 0.90268 0.80538 0.82360 0.82428 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 51. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.91 8.59 37.15 0.32 -2.59 16 2 C 0.08 1.63 4.89 -4.04 -0.02 1.61 16 3 N -0.38 -9.10 2.58 -114.44 -0.30 -9.39 16 4 C -0.32 -8.12 9.45 -13.45 -0.13 -8.25 16 5 H 0.12 3.21 7.36 -52.48 -0.39 2.83 16 6 C 0.05 1.04 5.44 -15.16 -0.08 0.95 16 7 N -0.80 -17.43 8.05 56.00 0.45 -16.98 16 8 Si 0.93 17.82 29.70 -169.99 -5.05 12.78 16 9 H -0.26 -5.13 7.11 56.52 0.40 -4.73 16 10 H -0.27 -5.16 7.11 56.52 0.40 -4.76 16 11 H -0.28 -5.17 7.11 56.52 0.40 -4.77 16 12 C 0.42 10.13 7.12 -12.47 -0.09 10.04 16 13 O -0.59 -16.26 15.85 5.37 0.09 -16.18 16 14 C -0.12 -2.30 5.35 -104.91 -0.56 -2.86 16 15 C -0.03 -0.49 6.86 -39.16 -0.27 -0.76 16 16 C -0.02 -0.36 6.88 -80.01 -0.55 -0.91 16 17 N -0.01 -0.17 4.98 33.93 0.17 0.00 16 18 O -0.17 -3.11 19.14 -31.57 -0.60 -3.72 16 19 O -0.19 -3.09 19.14 -31.57 -0.60 -3.70 16 20 C -0.05 -0.59 9.57 -39.50 -0.38 -0.97 16 21 C -0.16 -1.94 10.01 -39.57 -0.40 -2.34 16 22 C 0.18 3.03 7.25 -38.93 -0.28 2.75 16 23 F -0.11 -1.97 16.26 2.25 0.04 -1.93 16 24 H 0.03 0.64 7.19 -51.93 -0.37 0.27 16 25 H 0.09 1.99 6.30 -51.93 -0.33 1.66 16 26 H 0.05 0.91 8.14 -51.93 -0.42 0.48 16 27 H 0.12 2.52 5.66 -51.93 -0.29 2.23 16 28 H 0.05 0.92 4.18 -51.93 -0.22 0.70 16 29 H 0.28 5.68 8.26 -40.82 -0.34 5.34 16 30 H 0.18 3.20 3.46 -52.49 -0.18 3.02 16 31 H 0.16 1.59 7.56 -52.49 -0.40 1.19 16 32 H 0.16 1.38 8.06 -52.48 -0.42 0.96 16 LS Contribution 284.61 15.07 4.29 4.29 Total: -1.00 -27.63 284.61 -6.11 -33.74 By element: Atomic # 1 Polarization: 6.58 SS G_CDS: -2.15 Total: 4.42 kcal Atomic # 6 Polarization: -0.90 SS G_CDS: -2.44 Total: -3.33 kcal Atomic # 7 Polarization: -26.70 SS G_CDS: 0.32 Total: -26.37 kcal Atomic # 8 Polarization: -22.47 SS G_CDS: -1.12 Total: -23.59 kcal Atomic # 9 Polarization: -1.97 SS G_CDS: 0.04 Total: -1.93 kcal Atomic # 14 Polarization: 17.82 SS G_CDS: -5.05 Total: 12.78 kcal Total LS contribution 4.29 Total: 4.29 kcal Total: -27.63 -6.11 -33.74 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000227416207.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.321 kcal (2) G-P(sol) polarization free energy of solvation -27.627 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.694 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.111 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.738 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.583 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds