Wall clock time and date at job start Tue Mar 31 2020 05:40:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09001 * 109.47375 * 2 1 4 4 O 1.45194 * 109.47240 * 120.00043 * 2 1 3 5 5 C 1.34233 * 116.99937 * 270.00128 * 4 2 1 6 6 O 1.20826 * 119.99835 * 359.97438 * 5 4 2 7 7 C 1.50696 * 120.00053 * 180.02562 * 5 4 2 8 8 C 1.53003 * 109.47136 * 179.97438 * 7 5 4 9 9 C 1.50700 * 109.46912 * 179.97438 * 8 7 5 10 10 H 1.07998 * 120.00451 * 0.02562 * 9 8 7 11 11 C 1.37880 * 119.99721 * 180.02562 * 9 8 7 12 12 N 1.31514 * 120.00182 * 180.02562 * 11 9 8 13 13 Si 1.86797 * 119.99946 * 0.02562 * 11 9 8 14 14 H 1.48501 * 109.47542 * 90.00315 * 13 11 9 15 15 H 1.48508 * 109.47223 * 209.99925 * 13 11 9 16 16 H 1.48502 * 109.47246 * 329.99856 * 13 11 9 17 17 C 1.50706 * 109.47103 * 240.00064 * 2 1 3 18 18 C 1.38232 * 120.00154 * 264.99846 * 17 2 1 19 19 C 1.38225 * 120.01059 * 180.02562 * 18 17 2 20 20 C 1.38262 * 120.02663 * 0.02562 * 19 18 17 21 21 C 1.38196 * 120.01163 * 359.97438 * 20 19 18 22 22 C 1.38331 * 120.00928 * 84.72519 * 17 2 1 23 23 Cl 1.73599 * 120.01101 * 359.97438 * 22 17 2 24 24 H 1.09002 * 109.46777 * 300.00555 * 1 2 3 25 25 H 1.09000 * 109.47140 * 59.99983 * 1 2 3 26 26 H 1.08992 * 109.47280 * 179.97438 * 1 2 3 27 27 H 1.08998 * 109.47179 * 299.99562 * 7 5 4 28 28 H 1.09001 * 109.47359 * 59.99286 * 7 5 4 29 29 H 1.09000 * 109.47115 * 299.99474 * 8 7 5 30 30 H 1.09002 * 109.47038 * 60.00081 * 8 7 5 31 31 H 0.96999 * 120.00479 * 179.97438 * 12 11 9 32 32 H 1.07998 * 119.99768 * 0.02562 * 18 17 2 33 33 H 1.08000 * 119.98513 * 179.97438 * 19 18 17 34 34 H 1.08001 * 119.99018 * 179.97438 * 20 19 18 35 35 H 1.07999 * 120.00420 * 180.02562 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 8 2.0140 -0.6845 1.1855 5 6 2.2171 0.0641 2.2811 6 8 1.9981 1.2519 2.2503 7 6 2.7193 -0.5769 3.5491 8 6 2.8644 0.4893 4.6368 9 6 3.3660 -0.1518 5.9050 10 1 3.5622 -1.2135 5.9324 11 6 3.5745 0.6170 7.0303 12 7 4.0128 0.0576 8.1370 13 14 3.2346 2.4532 6.9832 14 1 1.8247 2.7059 7.3751 15 1 4.1435 3.1494 7.9289 16 1 3.4653 2.9642 5.6081 17 6 2.0323 -0.7104 -1.2305 18 6 2.3611 -2.0516 -1.1685 19 6 2.8224 -2.7033 -2.2969 20 6 2.9557 -2.0140 -3.4880 21 6 2.6273 -0.6731 -3.5511 22 6 2.1591 -0.0219 -2.4236 23 17 1.7390 1.6606 -2.5040 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0276 -0.0005 27 1 2.0105 -1.3371 3.8773 28 1 3.6884 -1.0400 3.3631 29 1 3.5734 1.2492 4.3084 30 1 1.8954 0.9526 4.8229 31 1 4.1598 0.5986 8.9286 32 1 2.2576 -2.5905 -0.2383 33 1 3.0795 -3.7511 -2.2478 34 1 3.3165 -2.5236 -4.3691 35 1 2.7310 -0.1349 -4.4817 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000291248792.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:40:07 Heat of formation + Delta-G solvation = -83.800567 kcal Electronic energy + Delta-G solvation = -19186.853188 eV Core-core repulsion = 15982.302337 eV Total energy + Delta-G solvation = -3204.550850 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.081 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -40.50132 -39.41509 -36.71997 -36.50741 -33.65804 -33.17003 -31.38114 -31.04206 -29.51065 -26.60027 -24.32414 -23.15317 -22.10404 -20.85222 -19.74578 -17.67353 -17.58735 -16.69933 -16.07088 -15.95125 -15.50229 -14.99403 -14.31947 -14.12396 -14.08801 -13.80982 -13.51738 -13.09567 -12.67679 -12.58524 -12.33017 -11.94915 -11.84619 -11.74386 -11.51268 -11.27467 -11.03679 -10.78798 -10.61628 -10.31964 -10.17566 -9.94390 -9.71381 -9.26957 -9.19929 -8.97876 -8.56358 -6.07989 -4.07927 0.80919 0.96126 1.84613 2.66726 2.88763 3.32738 3.33967 3.41069 3.50363 4.27513 4.45745 4.54119 4.67981 4.92329 4.96033 5.03988 5.10074 5.23426 5.26848 5.33347 5.55937 5.66681 5.70082 5.89286 5.97175 5.97593 6.00215 6.12090 6.12396 6.48800 6.48950 6.78768 7.22815 7.30159 7.69869 8.18151 8.45948 8.94218 9.53841 11.04571 Molecular weight = 282.08amu Principal moments of inertia in cm(-1) A = 0.027774 B = 0.003658 C = 0.003398 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1007.891376 B = 7652.343148 C = 8237.734834 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C 0.120 3.880 3 H 0.100 0.900 4 O -0.356 6.356 5 C 0.458 3.542 6 O -0.507 6.507 7 C -0.095 4.095 8 C -0.002 4.002 9 C -0.527 4.527 10 H 0.075 0.925 11 C 0.071 3.929 12 N -0.900 5.900 13 Si 0.876 3.124 14 H -0.276 1.276 15 H -0.287 1.287 16 H -0.262 1.262 17 C -0.076 4.076 18 C -0.082 4.082 19 C -0.116 4.116 20 C -0.109 4.109 21 C -0.112 4.112 22 C -0.029 4.029 23 Cl -0.065 7.065 24 H 0.071 0.929 25 H 0.074 0.926 26 H 0.067 0.933 27 H 0.099 0.901 28 H 0.099 0.901 29 H 0.026 0.974 30 H 0.021 0.979 31 H 0.264 0.736 32 H 0.143 0.857 33 H 0.132 0.868 34 H 0.132 0.868 35 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.867 -4.119 -25.200 25.994 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.219 4.219 2 C 0.065 3.935 3 H 0.118 0.882 4 O -0.274 6.274 5 C 0.302 3.698 6 O -0.394 6.394 7 C -0.132 4.132 8 C -0.040 4.040 9 C -0.565 4.565 10 H 0.094 0.906 11 C -0.131 4.131 12 N -0.539 5.539 13 Si 0.703 3.297 14 H -0.201 1.201 15 H -0.213 1.213 16 H -0.186 1.186 17 C -0.077 4.077 18 C -0.100 4.100 19 C -0.134 4.134 20 C -0.127 4.127 21 C -0.130 4.130 22 C -0.056 4.056 23 Cl -0.036 7.036 24 H 0.090 0.910 25 H 0.092 0.908 26 H 0.087 0.913 27 H 0.117 0.883 28 H 0.117 0.883 29 H 0.044 0.956 30 H 0.040 0.960 31 H 0.074 0.926 32 H 0.161 0.839 33 H 0.149 0.851 34 H 0.150 0.850 35 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -4.933 -3.550 -25.053 25.780 hybrid contribution -0.199 1.226 0.007 1.242 sum -5.132 -2.325 -25.047 25.673 Atomic orbital electron populations 1.22135 0.92988 1.03248 1.03493 1.21340 0.94774 0.96735 0.80692 0.88240 1.86575 1.77538 1.42948 1.20351 1.24776 0.73641 0.86326 0.85073 1.90618 1.47896 1.16994 1.83892 1.21550 1.02478 1.01374 0.87818 1.19487 0.97789 0.93886 0.92816 1.21025 1.44906 0.96848 0.93711 0.90643 1.24950 0.94292 0.98609 0.95222 1.69900 1.45895 1.36222 1.01855 0.86813 0.78464 0.85765 0.78617 1.20149 1.21300 1.18584 1.19552 1.00699 0.94664 0.92822 1.21118 0.96630 0.92901 0.99385 1.21327 0.98907 1.00555 0.92584 1.21162 0.99473 0.93587 0.98459 1.21001 0.99722 0.95053 0.97259 1.20729 1.03799 0.85914 0.95131 1.98385 1.91826 1.14999 1.98403 0.91047 0.90760 0.91348 0.88276 0.88292 0.95589 0.96025 0.92588 0.83932 0.85056 0.85025 0.84774 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.96 9.53 37.16 0.35 -1.60 16 2 C 0.12 1.66 2.28 -27.88 -0.06 1.60 16 3 H 0.10 1.55 6.15 -51.93 -0.32 1.23 16 4 O -0.36 -5.57 8.71 -39.27 -0.34 -5.91 16 5 C 0.46 8.51 7.93 36.00 0.29 8.80 16 6 O -0.51 -10.82 15.20 -18.75 -0.29 -11.11 16 7 C -0.09 -1.83 5.75 -27.88 -0.16 -1.99 16 8 C 0.00 -0.06 3.33 -27.88 -0.09 -0.15 16 9 C -0.53 -14.82 9.66 -34.44 -0.33 -15.15 16 10 H 0.08 2.21 7.99 -52.49 -0.42 1.79 16 11 C 0.07 2.07 5.47 -17.82 -0.10 1.98 16 12 N -0.90 -27.56 13.96 55.43 0.77 -26.78 16 13 Si 0.88 22.19 27.47 -169.99 -4.67 17.52 16 14 H -0.28 -6.87 7.11 56.52 0.40 -6.46 16 15 H -0.29 -7.13 7.11 56.52 0.40 -6.73 16 16 H -0.26 -6.57 6.54 56.52 0.37 -6.20 16 17 C -0.08 -0.92 5.07 -104.59 -0.53 -1.45 16 18 C -0.08 -0.87 9.35 -39.59 -0.37 -1.24 16 19 C -0.12 -0.97 10.05 -39.58 -0.40 -1.36 16 20 C -0.11 -0.84 10.05 -39.59 -0.40 -1.23 16 21 C -0.11 -0.99 9.83 -39.55 -0.39 -1.38 16 22 C -0.03 -0.32 6.31 -39.50 -0.25 -0.57 16 23 Cl -0.07 -0.72 27.13 -51.86 -1.41 -2.13 16 24 H 0.07 0.94 8.14 -51.93 -0.42 0.52 16 25 H 0.07 0.80 7.86 -51.93 -0.41 0.39 16 26 H 0.07 0.75 8.14 -51.93 -0.42 0.32 16 27 H 0.10 1.76 8.14 -51.93 -0.42 1.34 16 28 H 0.10 1.78 8.14 -51.93 -0.42 1.35 16 29 H 0.03 0.65 7.16 -51.93 -0.37 0.28 16 30 H 0.02 0.53 7.53 -51.93 -0.39 0.14 16 31 H 0.26 7.58 8.31 -40.82 -0.34 7.24 16 32 H 0.14 1.46 7.34 -52.49 -0.39 1.08 16 33 H 0.13 0.79 8.06 -52.49 -0.42 0.36 16 34 H 0.13 0.66 8.06 -52.49 -0.42 0.23 16 35 H 0.13 0.92 8.06 -52.49 -0.42 0.50 16 LS Contribution 316.92 15.07 4.78 4.78 Total: -1.00 -31.98 316.92 -8.02 -39.99 By element: Atomic # 1 Polarization: 1.81 SS G_CDS: -4.42 Total: -2.61 kcal Atomic # 6 Polarization: -11.30 SS G_CDS: -2.44 Total: -13.74 kcal Atomic # 7 Polarization: -27.56 SS G_CDS: 0.77 Total: -26.78 kcal Atomic # 8 Polarization: -16.39 SS G_CDS: -0.63 Total: -17.02 kcal Atomic # 14 Polarization: 22.19 SS G_CDS: -4.67 Total: 17.52 kcal Atomic # 17 Polarization: -0.72 SS G_CDS: -1.41 Total: -2.13 kcal Total LS contribution 4.78 Total: 4.78 kcal Total: -31.98 -8.02 -39.99 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000291248792.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.808 kcal (2) G-P(sol) polarization free energy of solvation -31.977 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.784 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.016 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.993 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.801 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds