Wall clock time and date at job start Tue Mar 31 2020 05:57:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45194 * 1 3 3 C 1.34648 * 116.99863 * 2 1 4 4 O 1.21513 * 120.00186 * 359.97438 * 3 2 1 5 5 N 1.34778 * 119.99972 * 179.97438 * 3 2 1 6 6 C 1.40050 * 120.00150 * 185.80365 * 5 3 2 7 7 C 1.38619 * 120.03198 * 19.59118 * 6 5 3 8 8 C 1.38937 * 119.87151 * 179.97438 * 7 6 5 9 9 N 1.39532 * 120.02309 * 179.97438 * 8 7 6 10 10 C 1.34774 * 119.99526 * 145.77420 * 9 8 7 11 11 O 1.21763 * 120.00477 * 355.00691 * 10 9 8 12 12 C 1.41840 * 119.99777 * 174.99904 * 10 9 8 13 13 H 1.07996 * 119.99743 * 6.48720 * 12 10 9 14 14 C 1.40131 * 119.99733 * 186.48701 * 12 10 9 15 15 N 1.30624 * 120.00318 * 6.50057 * 14 12 10 16 16 Si 1.86806 * 119.99647 * 186.49744 * 14 12 10 17 17 H 1.48497 * 109.47081 * 94.98971 * 16 14 12 18 18 H 1.48500 * 109.46958 * 214.99090 * 16 14 12 19 19 H 1.48500 * 109.46903 * 334.99213 * 16 14 12 20 20 C 1.39116 * 119.94936 * 359.97438 * 8 7 6 21 21 C 1.38105 * 120.06894 * 359.97438 * 20 8 7 22 22 C 1.38417 * 120.12152 * 0.02562 * 21 20 8 23 23 F 1.35096 * 119.96766 * 180.27212 * 22 21 20 24 24 H 1.09004 * 109.47379 * 179.97438 * 1 2 3 25 25 H 1.09008 * 109.47477 * 299.99953 * 1 2 3 26 26 H 1.09004 * 109.47207 * 60.00229 * 1 2 3 27 27 H 0.97002 * 120.00370 * 5.80484 * 5 3 2 28 28 H 1.08000 * 120.06238 * 359.95619 * 7 6 5 29 29 H 0.96998 * 120.00468 * 325.77868 * 9 8 7 30 30 H 0.96999 * 120.00162 * 179.97438 * 15 14 12 31 31 H 1.08002 * 119.97170 * 180.02562 * 20 8 7 32 32 H 1.07991 * 119.93796 * 179.97438 * 21 20 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0632 1.1997 0.0000 4 8 1.4014 2.2188 -0.0005 5 7 3.4091 1.2703 0.0005 6 6 4.0452 2.5120 0.1232 7 6 3.3551 3.5969 0.6409 8 6 3.9895 4.8270 0.7616 9 7 3.2976 5.9214 1.2819 10 6 3.9478 6.8375 2.0264 11 8 5.1164 6.6643 2.3214 12 6 3.2707 8.0037 2.4663 13 1 2.2096 8.1088 2.2953 14 6 3.9787 9.0193 3.1227 15 7 5.2798 8.9522 3.2176 16 14 3.0619 10.4692 3.8621 17 1 2.8009 10.2084 5.3005 18 1 3.8842 11.6979 3.7230 19 1 1.7716 10.6539 3.1505 20 6 5.3151 4.9668 0.3634 21 6 6.0009 3.8841 -0.1512 22 6 5.3716 2.6573 -0.2727 23 9 6.0471 1.5989 -0.7713 24 1 -0.3634 -1.0277 -0.0005 25 1 -0.3634 0.5139 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 3.9373 0.4611 -0.0841 28 1 2.3260 3.4862 0.9496 29 1 2.3488 6.0227 1.1077 30 1 5.7699 9.6554 3.6716 31 1 5.8088 5.9228 0.4574 32 1 7.0297 3.9951 -0.4601 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000495403500.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:57:41 Heat of formation + Delta-G solvation = -123.600882 kcal Electronic energy + Delta-G solvation = -21413.063916 eV Core-core repulsion = 17674.910475 eV Total energy + Delta-G solvation = -3738.153440 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 282.085 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -48.52532 -40.91619 -39.18527 -37.58710 -36.36631 -34.92605 -33.25706 -32.43963 -29.83298 -28.76085 -27.50288 -26.34747 -23.37769 -22.32803 -21.41386 -19.94211 -19.04952 -17.60848 -17.52546 -17.15323 -16.64228 -16.28197 -15.77242 -15.37487 -15.27148 -14.76782 -14.18629 -13.95643 -13.88358 -13.46628 -13.15313 -12.76045 -12.57981 -12.28720 -12.08958 -12.01625 -11.38928 -11.30995 -11.16442 -10.98433 -10.71322 -10.53341 -10.35409 -10.08158 -9.20246 -8.89581 -8.06922 -7.76632 -7.04573 -6.44661 -4.92777 1.53365 1.71419 1.94902 2.72793 3.04026 3.12125 3.15521 3.91842 4.01674 4.06868 4.44698 4.56401 4.63490 4.92652 5.01775 5.18350 5.27402 5.61037 5.61395 5.74069 5.83547 5.93967 6.23879 6.37287 6.53284 6.82826 7.01890 7.18459 7.22445 7.27660 7.81652 7.99076 8.11096 8.13717 8.77369 9.22842 10.33618 10.52666 Molecular weight = 282.08amu Principal moments of inertia in cm(-1) A = 0.021726 B = 0.004293 C = 0.003635 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1288.465659 B = 6520.251603 C = 7701.269334 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 O -0.371 6.371 3 C 0.647 3.353 4 O -0.546 6.546 5 N -0.640 5.640 6 C 0.147 3.853 7 C -0.173 4.173 8 C 0.212 3.788 9 N -0.697 5.697 10 C 0.545 3.455 11 O -0.568 6.568 12 C -0.539 4.539 13 H 0.072 0.928 14 C 0.090 3.910 15 N -0.749 5.749 16 Si 0.913 3.087 17 H -0.270 1.270 18 H -0.277 1.277 19 H -0.262 1.262 20 C -0.117 4.117 21 C -0.107 4.107 22 C 0.015 3.985 23 F -0.150 7.150 24 H 0.103 0.897 25 H 0.066 0.934 26 H 0.065 0.935 27 H 0.418 0.582 28 H 0.160 0.840 29 H 0.395 0.605 30 H 0.274 0.726 31 H 0.151 0.849 32 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.834 -13.524 -6.222 15.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.039 4.039 2 O -0.285 6.285 3 C 0.401 3.599 4 O -0.434 6.434 5 N -0.290 5.290 6 C 0.052 3.948 7 C -0.196 4.196 8 C 0.111 3.889 9 N -0.340 5.340 10 C 0.354 3.646 11 O -0.451 6.451 12 C -0.574 4.574 13 H 0.090 0.910 14 C -0.133 4.133 15 N -0.376 5.376 16 Si 0.737 3.263 17 H -0.195 1.195 18 H -0.202 1.202 19 H -0.186 1.186 20 C -0.139 4.139 21 C -0.127 4.127 22 C -0.007 4.007 23 F -0.129 7.129 24 H 0.122 0.878 25 H 0.085 0.915 26 H 0.084 0.916 27 H 0.254 0.746 28 H 0.177 0.823 29 H 0.229 0.771 30 H 0.085 0.915 31 H 0.168 0.832 32 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -5.277 -13.064 -5.895 15.273 hybrid contribution -0.694 0.109 0.187 0.727 sum -5.971 -12.955 -5.708 15.364 Atomic orbital electron populations 1.23249 0.73917 1.03591 1.03097 1.86236 1.24556 1.30724 1.86941 1.18042 0.82947 0.82405 0.76494 1.90955 1.64488 1.34101 1.53810 1.41728 1.03540 1.09442 1.74274 1.17090 0.90541 0.84879 1.02265 1.21242 1.03246 0.89959 1.05170 1.17823 0.92251 0.87461 0.91364 1.44264 1.12559 1.23474 1.53669 1.17092 0.86894 0.82425 0.78156 1.90649 1.17070 1.77389 1.60015 1.20067 0.96549 1.01799 1.38959 0.91002 1.25740 0.94550 0.98910 0.94110 1.69962 1.07194 1.30506 1.29934 0.86259 0.80175 0.80003 0.79837 1.19537 1.20215 1.18633 1.21305 0.94360 1.00106 0.98086 1.20786 1.00416 0.90528 1.00999 1.17082 0.89720 0.85429 1.08510 1.91393 1.80021 1.55385 1.86150 0.87846 0.91514 0.91602 0.74587 0.82307 0.77073 0.91529 0.83177 0.84669 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.46 10.56 101.05 1.07 1.53 16 2 O -0.37 -4.27 10.62 -40.35 -0.43 -4.70 16 3 C 0.65 9.33 8.59 54.06 0.46 9.79 16 4 O -0.55 -9.27 13.03 -19.28 -0.25 -9.52 16 5 N -0.64 -8.97 5.36 -14.22 -0.08 -9.04 16 6 C 0.15 2.48 6.51 -83.61 -0.54 1.93 16 7 C -0.17 -3.25 8.70 -39.18 -0.34 -3.59 16 8 C 0.21 4.47 6.26 -83.77 -0.52 3.94 16 9 N -0.70 -15.72 5.31 -12.42 -0.07 -15.79 16 10 C 0.54 14.84 7.28 -14.88 -0.11 14.74 16 11 O -0.57 -17.23 12.68 5.13 0.07 -17.17 16 12 C -0.54 -14.45 9.31 -37.50 -0.35 -14.80 16 13 H 0.07 1.76 7.86 -52.49 -0.41 1.35 16 14 C 0.09 2.37 5.48 -17.36 -0.10 2.28 16 15 N -0.75 -21.12 11.81 55.55 0.66 -20.46 16 16 Si 0.91 19.10 29.56 -169.99 -5.03 14.08 16 17 H -0.27 -5.59 7.11 56.52 0.40 -5.19 16 18 H -0.28 -5.65 7.11 56.52 0.40 -5.25 16 19 H -0.26 -5.31 7.11 56.52 0.40 -4.91 16 20 C -0.12 -2.42 8.65 -39.30 -0.34 -2.76 16 21 C -0.11 -1.87 10.01 -39.56 -0.40 -2.26 16 22 C 0.02 0.26 7.31 -39.17 -0.29 -0.03 16 23 F -0.15 -2.28 16.74 2.25 0.04 -2.24 16 24 H 0.10 0.51 8.14 -51.93 -0.42 0.08 16 25 H 0.07 0.56 8.14 -51.92 -0.42 0.13 16 26 H 0.07 0.53 8.14 -51.93 -0.42 0.11 16 27 H 0.42 4.71 8.46 -40.82 -0.35 4.36 16 28 H 0.16 3.03 5.41 -52.49 -0.28 2.74 16 29 H 0.40 7.85 8.78 -40.82 -0.36 7.49 16 30 H 0.27 6.97 8.29 -40.82 -0.34 6.63 16 31 H 0.15 3.49 6.46 -52.49 -0.34 3.15 16 32 H 0.14 2.01 8.06 -52.49 -0.42 1.59 16 LS Contribution 292.83 15.07 4.41 4.41 Total: -1.00 -32.69 292.83 -4.69 -37.38 By element: Atomic # 1 Polarization: 14.86 SS G_CDS: -2.56 Total: 12.30 kcal Atomic # 6 Polarization: 12.21 SS G_CDS: -1.45 Total: 10.76 kcal Atomic # 7 Polarization: -45.81 SS G_CDS: 0.51 Total: -45.30 kcal Atomic # 8 Polarization: -30.78 SS G_CDS: -0.61 Total: -31.39 kcal Atomic # 9 Polarization: -2.28 SS G_CDS: 0.04 Total: -2.24 kcal Atomic # 14 Polarization: 19.10 SS G_CDS: -5.03 Total: 14.08 kcal Total LS contribution 4.41 Total: 4.41 kcal Total: -32.69 -4.69 -37.38 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000495403500.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.224 kcal (2) G-P(sol) polarization free energy of solvation -32.685 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.909 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.692 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.377 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.601 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds