Wall clock time and date at job start Tue Mar 31 2020 05:40:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 H 1.08997 * 109.47157 * 2 1 4 4 C 1.53002 * 109.46965 * 239.99969 * 2 1 3 5 5 C 1.50698 * 109.47125 * 64.99908 * 4 2 1 6 6 O 1.21204 * 119.99936 * 0.02562 * 5 4 2 7 7 O 1.34319 * 119.99721 * 179.97438 * 5 4 2 8 8 C 1.34918 * 116.99329 * 180.02562 * 7 5 4 9 9 H 1.07996 * 120.00716 * 0.02562 * 8 7 5 10 10 C 1.38758 * 119.99526 * 180.02562 * 8 7 5 11 11 N 1.31444 * 119.99858 * 0.02562 * 10 8 7 12 12 Si 1.86804 * 119.99928 * 179.97438 * 10 8 7 13 13 H 1.48500 * 109.46846 * 0.02562 * 12 10 8 14 14 H 1.48504 * 109.46877 * 120.00182 * 12 10 8 15 15 H 1.48496 * 109.47071 * 239.99926 * 12 10 8 16 16 C 1.53001 * 109.47304 * 120.00302 * 2 1 3 17 17 C 1.50706 * 109.46678 * 294.99952 * 16 2 1 18 18 C 1.38244 * 119.98773 * 89.99943 * 17 16 2 19 19 C 1.38217 * 120.01084 * 180.02562 * 18 17 16 20 20 C 1.38351 * 119.98541 * 0.25893 * 19 18 17 21 21 Cl 1.73604 * 120.00786 * 179.69323 * 20 19 18 22 22 C 1.38349 * 119.97465 * 359.42086 * 20 19 18 23 23 C 1.38212 * 119.98525 * 0.59771 * 22 20 19 24 24 H 1.09001 * 109.46602 * 300.00039 * 1 2 3 25 25 H 1.09001 * 109.46802 * 60.00124 * 1 2 3 26 26 H 1.09002 * 109.46814 * 180.02562 * 1 2 3 27 27 H 1.09004 * 109.46805 * 185.00121 * 4 2 1 28 28 H 1.09000 * 109.46910 * 305.00084 * 4 2 1 29 29 H 0.96998 * 119.99396 * 179.97438 * 11 10 8 30 30 H 1.08992 * 109.47474 * 174.99962 * 16 2 1 31 31 H 1.09001 * 109.47495 * 54.99375 * 16 2 1 32 32 H 1.07999 * 119.99331 * 0.02562 * 18 17 16 33 33 H 1.08002 * 120.00169 * 179.97438 * 19 18 17 34 34 H 1.08008 * 120.00633 * 180.29755 * 22 20 19 35 35 H 1.08000 * 119.99226 * 179.67843 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0400 -0.7213 -1.2493 5 6 1.6413 0.0570 -2.4766 6 8 1.0121 1.0867 -2.3633 7 8 1.9842 -0.3900 -3.6959 8 6 1.5965 0.3544 -4.7523 9 1 1.0369 1.2646 -4.5954 10 6 1.9168 -0.0497 -6.0406 11 7 2.5975 -1.1578 -6.2316 12 14 1.3796 0.9804 -7.5033 13 1 0.6320 2.1702 -7.0229 14 1 2.5761 1.4220 -8.2639 15 1 0.5040 0.1682 -8.3859 16 6 2.0401 -0.7213 1.2492 17 6 1.6414 0.0570 2.4766 18 6 0.4355 -0.2052 3.0995 19 6 0.0691 0.5087 4.2249 20 6 0.9070 1.4896 4.7247 21 17 0.4438 2.3921 6.1335 22 6 2.1167 1.7470 4.1047 23 6 2.4819 1.0327 2.9792 24 1 -0.3632 0.5139 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 3.1264 -0.7995 -1.2056 28 1 1.6054 -1.7198 -1.2951 29 1 2.8211 -1.4404 -7.1322 30 1 3.1263 -0.7995 1.2056 31 1 1.6054 -1.7198 1.2952 32 1 -0.2204 -0.9681 2.7068 33 1 -0.8733 0.3040 4.7113 34 1 2.7735 2.5093 4.4973 35 1 3.4238 1.2371 2.4921 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000772149263.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:40:39 Heat of formation + Delta-G solvation = -85.447203 kcal Electronic energy + Delta-G solvation = -18929.621248 eV Core-core repulsion = 15724.998994 eV Total energy + Delta-G solvation = -3204.622254 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.081 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -39.81183 -39.00348 -36.90946 -36.06760 -34.64047 -32.11963 -31.32859 -31.22794 -27.80535 -26.62606 -25.06695 -23.01808 -22.10590 -20.56485 -19.26565 -17.69062 -17.29577 -16.50527 -15.81833 -15.47466 -15.10067 -14.59883 -14.39112 -14.05913 -13.87428 -13.65187 -13.60115 -13.06510 -12.62378 -12.13719 -11.98152 -11.70372 -11.60404 -11.54400 -11.37004 -11.15622 -10.99229 -10.84738 -10.61099 -10.44355 -10.38385 -10.21512 -9.76240 -9.19858 -8.90453 -8.65925 -8.55563 -6.39068 -4.06616 0.97425 1.12076 1.94432 3.11179 3.19988 3.27443 3.44213 3.57976 3.96994 4.50497 4.57503 4.69453 4.76686 5.01831 5.13738 5.16710 5.24994 5.29077 5.43350 5.52726 5.65386 5.79844 5.81337 5.93007 6.03182 6.04480 6.07711 6.17237 6.25844 6.43114 6.61181 6.65204 6.76369 6.90189 7.43033 7.98799 8.76816 9.10424 9.90349 10.79324 Molecular weight = 282.08amu Principal moments of inertia in cm(-1) A = 0.043472 B = 0.002776 C = 0.002720 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 643.937819 B =10083.765776 C =10292.692305 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.068 4.068 3 H 0.079 0.921 4 C -0.101 4.101 5 C 0.398 3.602 6 O -0.554 6.554 7 O -0.218 6.218 8 C -0.380 4.380 9 H 0.095 0.905 10 C 0.040 3.960 11 N -0.867 5.867 12 Si 0.941 3.059 13 H -0.266 1.266 14 H -0.277 1.277 15 H -0.276 1.276 16 C -0.081 4.081 17 C -0.063 4.063 18 C -0.102 4.102 19 C -0.110 4.110 20 C -0.043 4.043 21 Cl -0.080 7.080 22 C -0.109 4.109 23 C -0.105 4.105 24 H 0.050 0.950 25 H 0.080 0.920 26 H 0.046 0.954 27 H 0.090 0.910 28 H 0.090 0.910 29 H 0.268 0.732 30 H 0.077 0.923 31 H 0.077 0.923 32 H 0.133 0.867 33 H 0.131 0.869 34 H 0.131 0.869 35 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.370 0.830 20.495 20.558 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.087 4.087 3 H 0.097 0.903 4 C -0.139 4.139 5 C 0.245 3.755 6 O -0.451 6.451 7 O -0.126 6.126 8 C -0.457 4.457 9 H 0.113 0.887 10 C -0.163 4.163 11 N -0.505 5.505 12 Si 0.766 3.234 13 H -0.190 1.190 14 H -0.202 1.202 15 H -0.202 1.202 16 C -0.119 4.119 17 C -0.063 4.063 18 C -0.120 4.120 19 C -0.129 4.129 20 C -0.070 4.070 21 Cl -0.051 7.051 22 C -0.128 4.128 23 C -0.123 4.123 24 H 0.069 0.931 25 H 0.099 0.901 26 H 0.065 0.935 27 H 0.108 0.892 28 H 0.108 0.892 29 H 0.078 0.922 30 H 0.095 0.905 31 H 0.095 0.905 32 H 0.150 0.850 33 H 0.149 0.851 34 H 0.149 0.851 35 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -1.485 1.044 20.451 20.532 hybrid contribution -0.263 0.555 -0.597 0.857 sum -1.748 1.599 19.854 19.995 Atomic orbital electron populations 1.22034 0.94697 1.01283 1.03220 1.20845 0.96909 0.99816 0.91131 0.90259 1.21176 1.02564 0.99628 0.90501 1.23193 0.80715 0.85610 0.86001 1.90516 1.41277 1.25999 1.87321 1.83887 1.66032 1.49512 1.13145 1.21252 1.35778 1.06438 0.82209 0.88723 1.25326 0.96300 0.96730 0.97958 1.70002 1.36554 1.21497 1.22418 0.85644 0.78498 0.79356 0.79940 1.18988 1.20216 1.20212 1.20781 1.01577 0.98395 0.91103 1.20041 0.94074 0.96116 0.96098 1.21082 0.96351 0.99929 0.94681 1.21035 0.99565 0.95391 0.96917 1.20903 0.96760 0.97445 0.91844 1.98361 1.92317 1.74251 1.40176 1.21032 0.95193 1.00423 0.96130 1.21076 1.00261 0.95513 0.95478 0.93083 0.90134 0.93477 0.89188 0.89153 0.92212 0.90480 0.90476 0.84961 0.85144 0.85121 0.84960 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.32 8.50 37.16 0.32 -2.00 16 2 C -0.07 -0.99 2.03 -90.61 -0.18 -1.17 16 3 H 0.08 1.28 7.95 -51.93 -0.41 0.86 16 4 C -0.10 -1.71 5.29 -27.88 -0.15 -1.86 16 5 C 0.40 9.54 7.62 36.00 0.27 9.81 16 6 O -0.55 -14.33 13.20 -19.05 -0.25 -14.58 16 7 O -0.22 -6.23 9.75 -20.72 -0.20 -6.43 16 8 C -0.38 -11.27 9.65 30.92 0.30 -10.97 16 9 H 0.10 2.83 6.86 -52.49 -0.36 2.47 16 10 C 0.04 1.14 5.49 -17.53 -0.10 1.05 16 11 N -0.87 -25.52 13.67 55.48 0.76 -24.77 16 12 Si 0.94 21.40 29.55 -169.99 -5.02 16.37 16 13 H -0.27 -5.96 7.11 56.52 0.40 -5.56 16 14 H -0.28 -6.08 7.11 56.52 0.40 -5.68 16 15 H -0.28 -6.08 7.11 56.52 0.40 -5.68 16 16 C -0.08 -0.88 4.84 -27.88 -0.13 -1.01 16 17 C -0.06 -0.68 4.71 -104.62 -0.49 -1.17 16 18 C -0.10 -1.03 7.96 -39.59 -0.32 -1.35 16 19 C -0.11 -1.10 9.83 -39.55 -0.39 -1.48 16 20 C -0.04 -0.45 6.32 -39.50 -0.25 -0.70 16 21 Cl -0.08 -0.78 28.96 -51.86 -1.50 -2.28 16 22 C -0.11 -1.10 9.83 -39.55 -0.39 -1.49 16 23 C -0.11 -1.08 9.70 -39.59 -0.38 -1.47 16 24 H 0.05 0.69 6.27 -51.93 -0.33 0.36 16 25 H 0.08 1.50 5.95 -51.93 -0.31 1.19 16 26 H 0.05 0.62 8.14 -51.93 -0.42 0.20 16 27 H 0.09 1.37 8.14 -51.93 -0.42 0.95 16 28 H 0.09 1.40 8.14 -51.93 -0.42 0.98 16 29 H 0.27 7.21 8.31 -40.82 -0.34 6.87 16 30 H 0.08 0.74 8.08 -51.93 -0.42 0.32 16 31 H 0.08 0.74 8.09 -51.93 -0.42 0.32 16 32 H 0.13 1.15 8.04 -52.49 -0.42 0.73 16 33 H 0.13 1.08 8.06 -52.49 -0.42 0.65 16 34 H 0.13 1.10 8.06 -52.48 -0.42 0.68 16 35 H 0.13 1.17 8.06 -52.49 -0.42 0.75 16 LS Contribution 316.37 15.07 4.77 4.77 Total: -1.00 -32.62 316.37 -7.69 -40.31 By element: Atomic # 1 Polarization: 4.76 SS G_CDS: -4.34 Total: 0.42 kcal Atomic # 6 Polarization: -11.92 SS G_CDS: -1.89 Total: -13.81 kcal Atomic # 7 Polarization: -25.52 SS G_CDS: 0.76 Total: -24.77 kcal Atomic # 8 Polarization: -20.56 SS G_CDS: -0.45 Total: -21.01 kcal Atomic # 14 Polarization: 21.40 SS G_CDS: -5.02 Total: 16.37 kcal Atomic # 17 Polarization: -0.78 SS G_CDS: -1.50 Total: -2.28 kcal Total LS contribution 4.77 Total: 4.77 kcal Total: -32.62 -7.69 -40.31 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000772149263.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.138 kcal (2) G-P(sol) polarization free energy of solvation -32.624 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.761 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.686 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.309 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.447 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds