Wall clock time and date at job start Tue Mar 31 2020 05:43:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.09002 * 109.47070 * 2 1 4 4 C 1.50703 * 109.46966 * 119.99910 * 2 1 3 5 5 O 1.20824 * 120.00141 * 119.99957 * 4 2 1 6 6 O 1.34226 * 119.99900 * 300.00390 * 4 2 1 7 7 C 1.45203 * 116.99798 * 179.97438 * 6 4 2 8 8 H 1.08992 * 109.47116 * 329.99893 * 7 6 4 9 9 C 1.53003 * 109.47088 * 90.00039 * 7 6 4 10 10 C 1.50702 * 109.46805 * 209.99754 * 7 6 4 11 11 H 1.07998 * 120.00186 * 359.97438 * 10 7 6 12 12 C 1.37884 * 119.99667 * 180.02562 * 10 7 6 13 13 N 1.31508 * 120.00202 * 0.02562 * 12 10 7 14 14 Si 1.86798 * 119.99672 * 179.97438 * 12 10 7 15 15 H 1.48496 * 109.47125 * 90.00169 * 14 12 10 16 16 H 1.48501 * 109.47152 * 209.99931 * 14 12 10 17 17 H 1.48500 * 109.47178 * 329.99861 * 14 12 10 18 18 C 1.50701 * 109.47419 * 239.99925 * 2 1 3 19 19 C 1.38239 * 119.98421 * 299.73127 * 18 2 1 20 20 C 1.38215 * 120.01290 * 179.72824 * 19 18 2 21 21 C 1.38353 * 119.98302 * 0.53970 * 20 19 18 22 22 Cl 1.73603 * 120.01230 * 179.74899 * 21 20 19 23 23 C 1.38353 * 119.97682 * 359.73414 * 21 20 19 24 24 C 1.38211 * 119.98231 * 359.97438 * 23 21 20 25 25 H 1.09002 * 109.47075 * 179.97438 * 1 2 3 26 26 H 1.08996 * 109.47407 * 300.00400 * 1 2 3 27 27 H 1.09000 * 109.46986 * 60.00171 * 1 2 3 28 28 H 1.08999 * 109.46931 * 299.99662 * 9 7 6 29 29 H 1.09001 * 109.47469 * 59.99777 * 9 7 6 30 30 H 1.08998 * 109.46989 * 180.02562 * 9 7 6 31 31 H 0.96998 * 120.00100 * 180.02562 * 13 12 10 32 32 H 1.08001 * 119.99800 * 359.97438 * 19 18 2 33 33 H 1.07995 * 120.00911 * 180.27092 * 20 19 18 34 34 H 1.08002 * 120.00831 * 179.97438 * 23 21 20 35 35 H 1.08001 * 119.99375 * 180.02562 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0323 -0.7104 1.2305 5 8 2.7269 -1.6928 1.1197 6 8 1.7080 -0.2518 2.4496 7 6 2.2266 -0.9864 3.5897 8 1 2.3401 -2.0373 3.3237 9 6 3.5869 -0.4120 3.9905 10 6 1.2682 -0.8614 4.7459 11 1 0.3603 -0.2871 4.6352 12 6 1.5509 -1.4796 5.9456 13 7 2.6571 -2.1777 6.0809 14 14 0.3633 -1.3241 7.3790 15 1 -0.6246 -2.4315 7.3257 16 1 1.1173 -1.3945 8.6564 17 1 -0.3469 -0.0226 7.2945 18 6 2.0324 -0.7104 -1.2304 19 6 1.7029 -2.0355 -1.4461 20 6 2.1587 -2.6860 -2.5772 21 6 2.9542 -2.0139 -3.4880 22 17 3.5325 -2.8322 -4.9057 23 6 3.2883 -0.6894 -3.2689 24 6 2.8269 -0.0383 -2.1404 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 4.2801 -0.5023 3.1542 29 1 3.4735 0.6390 4.2564 30 1 3.9765 -0.9637 4.8460 31 1 2.8558 -2.6128 6.9248 32 1 1.0859 -2.5615 -0.7326 33 1 1.8976 -3.7200 -2.7478 34 1 3.9096 -0.1643 -3.9794 35 1 3.0873 0.9958 -1.9693 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000845468080.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:43:29 Heat of formation + Delta-G solvation = -84.022512 kcal Electronic energy + Delta-G solvation = -19470.118196 eV Core-core repulsion = 16265.557721 eV Total energy + Delta-G solvation = -3204.560475 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.081 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -40.22319 -38.92774 -36.68500 -35.73940 -34.03713 -33.21956 -31.14372 -29.78073 -29.07910 -25.37102 -24.84381 -22.96427 -22.62155 -20.87457 -19.37695 -17.26637 -16.97646 -16.59735 -15.79168 -15.61265 -14.93846 -14.86065 -14.42290 -13.87852 -13.59758 -13.50992 -13.13402 -12.78596 -12.40893 -12.09324 -11.95826 -11.75669 -11.53278 -11.33379 -11.15333 -11.06981 -11.06065 -10.88396 -10.82993 -10.38437 -10.30502 -9.62233 -9.53125 -9.05291 -8.92668 -8.64067 -8.51521 -6.20642 -4.27847 1.04644 1.26555 2.03007 2.95219 3.22713 3.27928 3.31293 3.41543 3.83012 4.31574 4.52961 4.68945 4.81281 5.10909 5.12339 5.18142 5.31152 5.40307 5.48884 5.67029 5.84718 5.87463 5.93072 6.10562 6.15266 6.27620 6.50751 6.61555 6.72955 6.86466 6.89381 7.14752 7.57518 7.70311 7.91449 8.11645 8.60849 8.85860 9.37797 10.86725 Molecular weight = 282.08amu Principal moments of inertia in cm(-1) A = 0.034884 B = 0.003444 C = 0.003365 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 802.472829 B = 8128.666120 C = 8319.430769 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C -0.049 4.049 3 H 0.112 0.888 4 C 0.455 3.545 5 O -0.513 6.513 6 O -0.354 6.354 7 C 0.216 3.784 8 H 0.046 0.954 9 C -0.155 4.155 10 C -0.521 4.521 11 H 0.069 0.931 12 C 0.062 3.938 13 N -0.889 5.889 14 Si 0.912 3.088 15 H -0.278 1.278 16 H -0.284 1.284 17 H -0.271 1.271 18 C -0.062 4.062 19 C -0.070 4.070 20 C -0.111 4.111 21 C -0.035 4.035 22 Cl -0.080 7.080 23 C -0.115 4.115 24 C -0.098 4.098 25 H 0.062 0.938 26 H 0.079 0.921 27 H 0.067 0.933 28 H 0.015 0.985 29 H 0.037 0.963 30 H 0.099 0.901 31 H 0.266 0.734 32 H 0.132 0.868 33 H 0.132 0.868 34 H 0.132 0.868 35 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.683 3.563 -17.532 17.969 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 C -0.068 4.068 3 H 0.130 0.870 4 C 0.297 3.703 5 O -0.403 6.403 6 O -0.270 6.270 7 C 0.163 3.837 8 H 0.064 0.936 9 C -0.213 4.213 10 C -0.559 4.559 11 H 0.087 0.913 12 C -0.140 4.140 13 N -0.527 5.527 14 Si 0.738 3.262 15 H -0.204 1.204 16 H -0.209 1.209 17 H -0.196 1.196 18 C -0.062 4.062 19 C -0.088 4.088 20 C -0.130 4.130 21 C -0.061 4.061 22 Cl -0.051 7.051 23 C -0.133 4.133 24 C -0.117 4.117 25 H 0.081 0.919 26 H 0.098 0.902 27 H 0.086 0.914 28 H 0.034 0.966 29 H 0.056 0.944 30 H 0.118 0.882 31 H 0.076 0.924 32 H 0.149 0.851 33 H 0.150 0.850 34 H 0.150 0.850 35 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -1.315 3.082 -17.481 17.800 hybrid contribution -0.225 -0.189 0.742 0.798 sum -1.540 2.893 -16.740 17.057 Atomic orbital electron populations 1.21764 0.91225 1.03256 1.03410 1.19964 0.98425 1.00141 0.88313 0.87045 1.23097 0.78077 0.83020 0.86124 1.90625 1.35882 1.26125 1.87628 1.86473 1.69090 1.56566 1.14844 1.20635 0.92162 0.91779 0.79079 0.93607 1.22163 0.97030 1.00600 1.01487 1.21024 1.06436 1.33237 0.95241 0.91296 1.24893 0.95818 0.94677 0.98604 1.69896 1.23948 1.32601 1.26211 0.86276 0.80382 0.78725 0.80773 1.20394 1.20949 1.19574 1.19532 0.97392 0.94435 0.94841 1.20965 0.98464 0.93727 0.95634 1.21013 0.97891 1.00396 0.93705 1.20915 1.01005 0.93686 0.90532 1.98356 1.87912 1.79272 1.39537 1.20937 1.01037 0.92842 0.98521 1.20973 0.96901 1.00234 0.93547 0.91926 0.90233 0.91423 0.96569 0.94426 0.88241 0.92381 0.85051 0.84969 0.85018 0.84969 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.69 8.94 37.16 0.33 -1.36 16 2 C -0.05 -0.70 3.01 -92.92 -0.28 -0.98 16 3 H 0.11 1.34 7.88 -51.93 -0.41 0.93 16 4 C 0.45 9.11 7.09 36.01 0.26 9.37 16 5 O -0.51 -11.75 14.31 -18.75 -0.27 -12.02 16 6 O -0.35 -8.15 9.77 -39.25 -0.38 -8.53 16 7 C 0.22 5.72 2.56 -27.88 -0.07 5.65 16 8 H 0.05 1.34 7.16 -51.93 -0.37 0.97 16 9 C -0.16 -3.92 9.33 37.16 0.35 -3.57 16 10 C -0.52 -14.44 8.90 -34.44 -0.31 -14.74 16 11 H 0.07 1.87 7.81 -52.49 -0.41 1.46 16 12 C 0.06 1.70 5.30 -17.82 -0.09 1.60 16 13 N -0.89 -25.11 11.32 55.43 0.63 -24.48 16 14 Si 0.91 20.83 29.54 -169.99 -5.02 15.81 16 15 H -0.28 -6.28 7.11 56.52 0.40 -5.88 16 16 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 17 H -0.27 -6.07 7.11 56.52 0.40 -5.67 16 18 C -0.06 -0.84 4.40 -104.62 -0.46 -1.30 16 19 C -0.07 -0.97 7.92 -39.59 -0.31 -1.28 16 20 C -0.11 -1.40 9.83 -39.55 -0.39 -1.79 16 21 C -0.03 -0.42 6.32 -39.50 -0.25 -0.67 16 22 Cl -0.08 -0.87 28.96 -51.86 -1.50 -2.37 16 23 C -0.11 -1.28 9.83 -39.55 -0.39 -1.67 16 24 C -0.10 -1.14 9.67 -39.59 -0.38 -1.52 16 25 H 0.06 0.77 7.40 -51.93 -0.38 0.39 16 26 H 0.08 1.01 8.11 -51.93 -0.42 0.59 16 27 H 0.07 0.64 8.14 -51.93 -0.42 0.22 16 28 H 0.02 0.37 8.14 -51.93 -0.42 -0.05 16 29 H 0.04 0.90 8.14 -51.93 -0.42 0.47 16 30 H 0.10 2.69 6.07 -51.93 -0.32 2.37 16 31 H 0.27 7.09 8.31 -40.82 -0.34 6.75 16 32 H 0.13 1.86 7.51 -52.49 -0.39 1.47 16 33 H 0.13 1.44 8.06 -52.49 -0.42 1.02 16 34 H 0.13 1.18 8.06 -52.49 -0.42 0.76 16 35 H 0.13 1.21 7.95 -52.49 -0.42 0.79 16 LS Contribution 317.04 15.07 4.78 4.78 Total: -1.00 -30.34 317.04 -8.14 -38.49 By element: Atomic # 1 Polarization: 4.96 SS G_CDS: -4.37 Total: 0.59 kcal Atomic # 6 Polarization: -10.27 SS G_CDS: -2.00 Total: -12.27 kcal Atomic # 7 Polarization: -25.11 SS G_CDS: 0.63 Total: -24.48 kcal Atomic # 8 Polarization: -19.89 SS G_CDS: -0.65 Total: -20.55 kcal Atomic # 14 Polarization: 20.83 SS G_CDS: -5.02 Total: 15.81 kcal Atomic # 17 Polarization: -0.87 SS G_CDS: -1.50 Total: -2.37 kcal Total LS contribution 4.78 Total: 4.78 kcal Total: -30.34 -8.14 -38.49 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000845468080.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.536 kcal (2) G-P(sol) polarization free energy of solvation -30.344 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.880 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.142 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.486 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.023 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds