Wall clock time and date at job start Tue Mar 31 2020 05:51:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53007 * 109.47077 * 2 1 4 4 N 1.46495 * 109.47293 * 120.00226 * 2 1 3 5 5 C 1.46510 * 119.99689 * 305.60801 * 4 2 1 6 6 C 1.50704 * 109.46853 * 277.80034 * 5 4 2 7 7 H 1.07996 * 119.99842 * 359.97438 * 6 5 4 8 8 C 1.37877 * 119.99641 * 180.02562 * 6 5 4 9 9 N 1.31518 * 119.99909 * 180.02562 * 8 6 5 10 10 Si 1.86803 * 120.00300 * 359.97438 * 8 6 5 11 11 H 1.48499 * 109.46844 * 90.00331 * 10 8 6 12 12 H 1.48496 * 109.47092 * 210.00764 * 10 8 6 13 13 H 1.48501 * 109.46739 * 330.00833 * 10 8 6 14 14 C 1.34769 * 120.00477 * 125.60819 * 4 2 1 15 15 O 1.21566 * 120.00238 * 6.76647 * 14 4 2 16 16 C 1.47768 * 120.00369 * 186.76758 * 14 4 2 17 17 C 1.40021 * 120.56382 * 330.34695 * 16 14 4 18 18 C 1.38354 * 118.29752 * 180.23546 * 17 16 14 19 19 C 1.38346 * 119.34215 * 359.49037 * 18 17 16 20 20 N 1.31910 * 121.10930 * 0.25073 * 19 18 17 21 21 C 1.31832 * 121.85971 * 0.02562 * 20 19 18 22 22 Cl 1.73604 * 119.73814 * 180.02562 * 21 20 19 23 23 H 1.08998 * 109.47161 * 299.99889 * 1 2 3 24 24 H 1.08999 * 109.46952 * 60.00418 * 1 2 3 25 25 H 1.09000 * 109.47087 * 179.97438 * 1 2 3 26 26 H 1.09007 * 109.47323 * 239.99979 * 2 1 3 27 27 H 1.09001 * 109.46612 * 180.02562 * 3 2 1 28 28 H 1.08999 * 109.46888 * 299.99621 * 3 2 1 29 29 H 1.08998 * 109.47035 * 60.00033 * 3 2 1 30 30 H 1.08996 * 109.47176 * 37.79913 * 5 4 2 31 31 H 1.08995 * 109.47070 * 157.79870 * 5 4 2 32 32 H 0.96996 * 119.99850 * 179.97438 * 9 8 6 33 33 H 1.07993 * 120.85288 * 0.02562 * 17 16 14 34 34 H 1.07998 * 120.32408 * 179.76326 * 18 17 16 35 35 H 1.08006 * 119.44714 * 180.23152 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 7 2.0183 -0.6906 1.1961 5 6 1.5660 -0.2657 2.5232 6 6 2.3814 0.9178 2.9767 7 1 3.1589 1.3135 2.3402 8 6 2.1353 1.4946 4.2046 9 7 2.8464 2.5278 4.6002 10 14 0.7907 0.8096 5.3058 11 1 1.3612 -0.2380 6.1902 12 1 0.2250 1.9037 6.1353 13 1 -0.2827 0.2186 4.4670 14 6 2.8836 -1.7168 1.0757 15 8 3.3542 -1.9908 -0.0112 16 6 3.2605 -2.5089 2.2648 17 6 3.2746 -1.9221 3.5361 18 6 3.6396 -2.7059 4.6162 19 6 3.9656 -4.0345 4.4103 20 7 3.9389 -4.5635 3.2023 21 6 3.6033 -3.8575 2.1407 22 17 3.5859 -4.6101 0.5763 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 1.8933 -0.5139 -0.8900 27 1 3.1300 1.4425 -0.0005 28 1 1.6767 1.9563 -0.8900 29 1 1.6766 1.9564 0.8900 30 1 0.5138 0.0147 2.4759 31 1 1.6920 -1.0860 3.2299 32 1 2.6731 2.9338 5.4638 33 1 3.0107 -0.8835 3.6696 34 1 3.6653 -2.2857 5.6108 35 1 4.2472 -4.6488 5.2529 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000038102975.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:51:51 Heat of formation + Delta-G solvation = 22.278649 kcal Electronic energy + Delta-G solvation = -20707.800489 eV Core-core repulsion = 17540.142330 eV Total energy + Delta-G solvation = -3167.658159 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -40.48669 -38.76574 -36.40424 -35.91708 -33.72072 -32.54955 -31.25990 -30.47660 -28.29662 -26.71614 -24.40216 -23.36068 -22.65876 -21.17737 -18.79699 -17.25410 -17.06403 -16.87132 -16.32066 -15.54796 -14.73256 -14.59181 -14.20655 -13.88956 -13.58643 -13.53438 -13.26813 -12.80237 -12.47231 -12.12656 -11.84004 -11.62206 -11.47025 -11.26248 -11.12670 -10.96501 -10.81844 -10.64451 -10.36563 -10.20206 -9.74729 -9.69000 -9.48025 -8.98175 -8.83186 -8.75153 -7.85526 -6.44725 -4.47860 0.87219 1.36581 2.10109 2.99256 3.10563 3.12897 3.26450 3.58970 3.98138 4.04914 4.62159 4.81050 4.99091 5.12829 5.24519 5.39486 5.48863 5.60689 5.65306 5.75444 6.06990 6.12805 6.23169 6.28833 6.34398 6.38556 6.41800 6.57777 6.73863 6.75420 7.06873 7.14569 7.29941 7.81475 7.94217 8.23060 8.64828 8.75702 9.11583 10.65701 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.015117 B = 0.008585 C = 0.006109 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1851.810783 B = 3260.902539 C = 4581.982038 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C 0.141 3.859 3 C -0.158 4.158 4 N -0.576 5.576 5 C 0.178 3.822 6 C -0.546 4.546 7 H 0.090 0.910 8 C 0.081 3.919 9 N -0.875 5.875 10 Si 0.856 3.144 11 H -0.267 1.267 12 H -0.279 1.279 13 H -0.260 1.260 14 C 0.561 3.439 15 O -0.542 6.542 16 C -0.166 4.166 17 C -0.048 4.048 18 C -0.188 4.188 19 C 0.126 3.874 20 N -0.496 5.496 21 C 0.214 3.786 22 Cl -0.014 7.014 23 H 0.065 0.935 24 H 0.062 0.938 25 H 0.051 0.949 26 H 0.089 0.911 27 H 0.053 0.947 28 H 0.047 0.953 29 H 0.085 0.915 30 H 0.038 0.962 31 H 0.047 0.953 32 H 0.271 0.729 33 H 0.211 0.789 34 H 0.144 0.856 35 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.901 -7.549 -0.958 8.144 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.218 4.218 2 C 0.038 3.962 3 C -0.216 4.216 4 N -0.307 5.307 5 C 0.057 3.943 6 C -0.583 4.583 7 H 0.108 0.892 8 C -0.125 4.125 9 N -0.510 5.510 10 Si 0.682 3.318 11 H -0.192 1.192 12 H -0.204 1.204 13 H -0.185 1.185 14 C 0.348 3.652 15 O -0.421 6.421 16 C -0.172 4.172 17 C -0.073 4.073 18 C -0.208 4.208 19 C -0.030 4.030 20 N -0.207 5.207 21 C 0.049 3.951 22 Cl 0.015 6.985 23 H 0.084 0.916 24 H 0.081 0.919 25 H 0.070 0.930 26 H 0.107 0.893 27 H 0.072 0.928 28 H 0.066 0.934 29 H 0.104 0.896 30 H 0.056 0.944 31 H 0.064 0.936 32 H 0.081 0.919 33 H 0.227 0.773 34 H 0.162 0.838 35 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -2.432 -8.466 -1.636 8.959 hybrid contribution -0.858 0.591 0.938 1.401 sum -3.290 -7.876 -0.698 8.564 Atomic orbital electron populations 1.22132 0.95609 1.01650 1.02409 1.20894 0.93383 0.93810 0.88101 1.22203 1.01496 0.95416 1.02456 1.47803 1.43662 1.30727 1.08475 1.20633 0.96895 0.96405 0.80389 1.21439 1.20054 1.13109 1.03712 0.89174 1.24937 0.95521 0.94511 0.97518 1.69873 1.38946 1.21175 1.21014 0.87138 0.83293 0.79781 0.81619 1.19230 1.20379 1.18462 1.17810 0.79538 0.80432 0.87410 1.90742 1.53935 1.70016 1.27452 1.20683 1.06612 0.93733 0.96172 1.23946 0.88155 1.05338 0.89844 1.22311 1.02182 0.95212 1.01112 1.22802 0.93761 0.93347 0.93116 1.67068 1.16142 1.38912 0.98598 1.21708 0.95891 0.88706 0.88832 1.98409 1.96150 1.82533 1.21423 0.91584 0.91923 0.92985 0.89332 0.92770 0.93355 0.89591 0.94403 0.93590 0.91912 0.77322 0.83794 0.81969 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.41 9.02 37.16 0.33 -2.08 16 2 C 0.14 2.51 3.23 -67.93 -0.22 2.29 16 3 C -0.16 -2.81 8.20 37.16 0.30 -2.50 16 4 N -0.58 -11.52 2.44 -168.60 -0.41 -11.93 16 5 C 0.18 3.65 3.46 -5.19 -0.02 3.63 16 6 C -0.55 -12.80 6.25 -34.44 -0.22 -13.01 16 7 H 0.09 2.39 7.09 -52.49 -0.37 2.01 16 8 C 0.08 1.96 5.33 -17.82 -0.09 1.87 16 9 N -0.87 -23.03 13.96 55.43 0.77 -22.25 16 10 Si 0.86 17.71 27.31 -169.99 -4.64 13.07 16 11 H -0.27 -5.26 7.11 56.52 0.40 -4.86 16 12 H -0.28 -5.89 7.11 56.52 0.40 -5.49 16 13 H -0.26 -5.18 6.54 56.52 0.37 -4.81 16 14 C 0.56 11.73 7.28 -12.37 -0.09 11.64 16 15 O -0.54 -12.06 14.17 5.31 0.08 -11.98 16 16 C -0.17 -3.25 5.60 -104.79 -0.59 -3.84 16 17 C -0.05 -0.90 7.62 -38.87 -0.30 -1.20 16 18 C -0.19 -2.89 10.10 -39.50 -0.40 -3.29 16 19 C 0.13 1.81 11.17 -17.48 -0.20 1.62 16 20 N -0.50 -8.48 10.33 -10.01 -0.10 -8.58 16 21 C 0.21 4.00 7.30 -17.01 -0.12 3.88 16 22 Cl -0.01 -0.25 26.67 -51.86 -1.38 -1.63 16 23 H 0.07 1.04 6.61 -51.93 -0.34 0.70 16 24 H 0.06 0.79 8.14 -51.93 -0.42 0.37 16 25 H 0.05 0.76 8.14 -51.93 -0.42 0.34 16 26 H 0.09 1.61 6.96 -51.92 -0.36 1.25 16 27 H 0.05 1.04 8.09 -51.93 -0.42 0.62 16 28 H 0.05 0.72 8.14 -51.93 -0.42 0.30 16 29 H 0.09 1.70 6.41 -51.93 -0.33 1.37 16 30 H 0.04 0.77 5.31 -51.93 -0.28 0.49 16 31 H 0.05 0.94 3.46 -51.96 -0.18 0.76 16 32 H 0.27 6.70 8.31 -40.82 -0.34 6.36 16 33 H 0.21 4.29 2.96 -52.49 -0.16 4.14 16 34 H 0.14 1.86 8.06 -52.49 -0.42 1.44 16 35 H 0.16 1.65 8.06 -52.48 -0.42 1.23 16 LS Contribution 295.92 15.07 4.46 4.46 Total: -1.00 -27.07 295.92 -6.55 -33.63 By element: Atomic # 1 Polarization: 9.94 SS G_CDS: -3.72 Total: 6.22 kcal Atomic # 6 Polarization: 0.61 SS G_CDS: -1.60 Total: -0.99 kcal Atomic # 7 Polarization: -43.03 SS G_CDS: 0.26 Total: -42.77 kcal Atomic # 8 Polarization: -12.06 SS G_CDS: 0.08 Total: -11.98 kcal Atomic # 14 Polarization: 17.71 SS G_CDS: -4.64 Total: 13.07 kcal Atomic # 17 Polarization: -0.25 SS G_CDS: -1.38 Total: -1.63 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -27.07 -6.55 -33.63 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000038102975.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.905 kcal (2) G-P(sol) polarization free energy of solvation -27.075 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.830 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.551 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.626 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.279 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds