Wall clock time and date at job start Tue Mar 31 2020 05:51:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.53008 * 109.46838 * 2 1 4 4 N 1.46496 * 109.47300 * 119.99954 * 2 1 3 5 5 C 1.46497 * 119.99987 * 119.05947 * 4 2 1 6 6 C 1.50700 * 109.47008 * 95.15853 * 5 4 2 7 7 H 1.08008 * 120.00137 * 0.02562 * 6 5 4 8 8 C 1.37878 * 120.00277 * 179.97438 * 6 5 4 9 9 N 1.31509 * 120.00204 * 180.02562 * 8 6 5 10 10 Si 1.86803 * 119.99752 * 0.02562 * 8 6 5 11 11 H 1.48492 * 109.47245 * 89.99841 * 10 8 6 12 12 H 1.48502 * 109.47153 * 210.00151 * 10 8 6 13 13 H 1.48505 * 109.47115 * 329.99774 * 10 8 6 14 14 C 1.34778 * 120.00092 * 299.06119 * 4 2 1 15 15 O 1.21522 * 120.00041 * 5.20792 * 14 4 2 16 16 C 1.48162 * 120.00247 * 185.20489 * 14 4 2 17 17 C 1.39277 * 119.71724 * 185.85170 * 16 14 4 18 18 C 1.38627 * 119.08831 * 179.73476 * 17 16 14 19 19 C 1.38558 * 118.50754 * 0.52421 * 18 17 16 20 20 C 1.38739 * 119.34124 * 359.73768 * 19 18 17 21 21 Cl 1.73596 * 119.56344 * 179.97438 * 20 19 18 22 22 N 1.31610 * 120.86631 * 359.97438 * 20 19 18 23 23 H 1.09001 * 109.46919 * 306.21373 * 1 2 3 24 24 H 1.08999 * 109.46920 * 66.21501 * 1 2 3 25 25 H 1.09001 * 109.46757 * 186.21407 * 1 2 3 26 26 H 1.08994 * 109.47601 * 240.00313 * 2 1 3 27 27 H 1.08999 * 109.46994 * 183.36959 * 3 2 1 28 28 H 1.08992 * 109.47010 * 303.37492 * 3 2 1 29 29 H 1.09002 * 109.46855 * 63.37221 * 3 2 1 30 30 H 1.09005 * 109.47048 * 215.15616 * 5 4 2 31 31 H 1.08998 * 109.47192 * 335.15746 * 5 4 2 32 32 H 0.97009 * 119.99997 * 180.02562 * 9 8 6 33 33 H 1.07999 * 120.44917 * 359.97438 * 17 16 14 34 34 H 1.08001 * 120.74579 * 180.24231 * 18 17 16 35 35 H 1.08000 * 120.33197 * 179.75030 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 7 2.0184 -0.6906 1.1961 5 6 2.8436 -1.8936 1.0618 6 6 4.3003 -1.5136 1.1295 7 1 4.5832 -0.4794 1.2600 8 6 5.2721 -2.4862 1.0259 9 7 6.5433 -2.1547 1.0855 10 14 4.7829 -4.2750 0.8009 11 1 4.6742 -4.5799 -0.6483 12 1 5.8127 -5.1509 1.4153 13 1 3.4726 -4.5161 1.4571 14 6 1.7085 -0.2192 2.4202 15 8 0.9476 0.7214 2.5344 16 6 2.2956 -0.8477 3.6266 17 6 1.8790 -0.4378 4.8908 18 6 2.4329 -1.0386 6.0106 19 6 3.3926 -2.0210 5.8275 20 6 3.7646 -2.3763 4.5390 21 17 4.9668 -3.6061 4.3028 22 7 3.2179 -1.7932 3.4934 23 1 -0.3633 0.6072 0.8292 24 1 -0.3633 0.4145 -0.9404 25 1 -0.3633 -1.0217 0.1112 26 1 1.8935 -0.5137 -0.8899 27 1 3.1283 1.4432 -0.0604 28 1 1.6281 1.9735 -0.8581 29 1 1.7268 1.9386 0.9187 30 1 2.6108 -2.5861 1.8708 31 1 2.6367 -2.3710 0.1040 32 1 7.2270 -2.8390 1.0122 33 1 1.1319 0.3348 4.9971 34 1 2.1267 -0.7441 7.0036 35 1 3.8465 -2.5057 6.6793 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000051073240.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:51:38 Heat of formation + Delta-G solvation = 18.630200 kcal Electronic energy + Delta-G solvation = -20853.909150 eV Core-core repulsion = 17686.092782 eV Total energy + Delta-G solvation = -3167.816368 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -40.34596 -38.73261 -36.09544 -35.55360 -33.29993 -32.23499 -31.44256 -30.45306 -27.47004 -26.68458 -24.53298 -23.18392 -22.32218 -21.45670 -19.03743 -16.89552 -16.74802 -16.44354 -15.86211 -15.22354 -14.87379 -14.70974 -14.03061 -13.78084 -13.57027 -13.25831 -13.03720 -12.69859 -12.40548 -11.91427 -11.83739 -11.69094 -11.53859 -11.23360 -11.10837 -10.90883 -10.69538 -10.56738 -10.20056 -10.06843 -9.62899 -9.45807 -9.28173 -8.65490 -8.55214 -8.40496 -7.70474 -5.97599 -3.88472 0.93444 1.44583 2.31576 3.20447 3.32599 3.39672 3.44056 3.68897 4.22729 4.49877 4.64677 4.94005 5.14199 5.20412 5.39033 5.40708 5.52627 5.63091 5.65729 5.76524 6.04291 6.07141 6.13300 6.22653 6.29510 6.41660 6.59294 6.67614 6.68190 6.82204 7.06529 7.47758 7.71378 8.05956 8.16929 8.58372 8.83699 9.04857 9.65145 11.15621 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.014297 B = 0.010145 C = 0.006663 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1958.019932 B = 2759.271310 C = 4201.426555 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C 0.145 3.855 3 C -0.164 4.164 4 N -0.565 5.565 5 C 0.207 3.793 6 C -0.490 4.490 7 H 0.070 0.930 8 C 0.090 3.910 9 N -0.894 5.894 10 Si 0.856 3.144 11 H -0.284 1.284 12 H -0.286 1.286 13 H -0.262 1.262 14 C 0.571 3.429 15 O -0.558 6.558 16 C 0.096 3.904 17 C -0.120 4.120 18 C -0.086 4.086 19 C -0.143 4.143 20 C 0.165 3.835 21 Cl -0.027 7.027 22 N -0.376 5.376 23 H 0.076 0.924 24 H 0.056 0.944 25 H 0.049 0.951 26 H 0.086 0.914 27 H 0.060 0.940 28 H 0.055 0.945 29 H 0.071 0.929 30 H 0.059 0.941 31 H 0.018 0.982 32 H 0.260 0.740 33 H 0.147 0.853 34 H 0.143 0.857 35 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.577 0.054 6.787 10.938 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.224 4.224 2 C 0.042 3.958 3 C -0.222 4.222 4 N -0.293 5.293 5 C 0.087 3.913 6 C -0.529 4.529 7 H 0.088 0.912 8 C -0.112 4.112 9 N -0.533 5.533 10 Si 0.685 3.315 11 H -0.211 1.211 12 H -0.212 1.212 13 H -0.186 1.186 14 C 0.358 3.642 15 O -0.439 6.439 16 C -0.043 4.043 17 C -0.142 4.142 18 C -0.112 4.112 19 C -0.165 4.165 20 C -0.001 4.001 21 Cl 0.002 6.998 22 N -0.089 5.089 23 H 0.095 0.905 24 H 0.075 0.925 25 H 0.068 0.932 26 H 0.105 0.895 27 H 0.079 0.921 28 H 0.074 0.926 29 H 0.090 0.910 30 H 0.077 0.923 31 H 0.035 0.965 32 H 0.070 0.930 33 H 0.165 0.835 34 H 0.161 0.839 35 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -8.425 0.094 5.920 10.297 hybrid contribution 0.152 -1.038 0.624 1.220 sum -8.273 -0.944 6.544 10.590 Atomic orbital electron populations 1.22231 0.95676 1.02015 1.02480 1.20973 0.93507 0.93573 0.87782 1.22133 1.01734 0.95924 1.02449 1.48046 1.48951 1.28328 1.03996 1.20281 0.91487 0.82635 0.96918 1.21025 0.87819 0.95737 1.48296 0.91166 1.24561 0.94565 0.97512 0.94591 1.69876 0.99455 1.33264 1.50752 0.87141 0.79305 0.86965 0.78127 1.21061 1.21199 1.18625 1.17721 0.80779 0.82842 0.82835 1.90634 1.37378 1.29433 1.86465 1.21216 0.94351 0.94803 0.93911 1.22120 1.00224 0.99904 0.91903 1.21410 0.95444 0.95085 0.99280 1.22003 0.98844 0.98968 0.96660 1.21792 0.94410 0.94270 0.89624 1.98404 1.53188 1.50880 1.97369 1.68088 1.04447 1.05358 1.31012 0.90489 0.92524 0.93156 0.89546 0.92090 0.92630 0.91025 0.92330 0.96457 0.92960 0.83529 0.83903 0.84144 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.60 9.02 37.16 0.34 -2.26 16 2 C 0.14 2.63 3.27 -67.93 -0.22 2.41 16 3 C -0.16 -2.88 9.16 37.16 0.34 -2.54 16 4 N -0.56 -11.88 2.42 -168.46 -0.41 -12.29 16 5 C 0.21 4.83 3.80 -5.20 -0.02 4.81 16 6 C -0.49 -13.10 7.99 -34.44 -0.28 -13.37 16 7 H 0.07 2.12 8.06 -52.48 -0.42 1.70 16 8 C 0.09 2.47 5.47 -17.82 -0.10 2.37 16 9 N -0.89 -26.24 13.96 55.43 0.77 -25.47 16 10 Si 0.86 21.12 25.80 -169.99 -4.39 16.74 16 11 H -0.28 -6.95 7.11 56.52 0.40 -6.55 16 12 H -0.29 -7.05 7.11 56.52 0.40 -6.65 16 13 H -0.26 -6.20 6.54 56.52 0.37 -5.83 16 14 C 0.57 11.89 7.01 -12.18 -0.09 11.80 16 15 O -0.56 -11.58 12.63 5.35 0.07 -11.51 16 16 C 0.10 1.90 6.56 -83.01 -0.54 1.35 16 17 C -0.12 -1.89 9.63 -39.05 -0.38 -2.27 16 18 C -0.09 -1.12 10.17 -39.32 -0.40 -1.52 16 19 C -0.14 -2.08 9.88 -39.28 -0.39 -2.47 16 20 C 0.17 3.14 7.27 -17.46 -0.13 3.01 16 21 Cl -0.03 -0.53 27.41 -51.86 -1.42 -1.95 16 22 N -0.38 -8.06 4.76 -6.94 -0.03 -8.09 16 23 H 0.08 1.31 6.27 -51.93 -0.33 0.98 16 24 H 0.06 0.74 8.14 -51.93 -0.42 0.31 16 25 H 0.05 0.77 8.14 -51.93 -0.42 0.35 16 26 H 0.09 1.52 7.73 -51.93 -0.40 1.12 16 27 H 0.06 1.16 8.14 -51.93 -0.42 0.74 16 28 H 0.05 0.81 8.14 -51.93 -0.42 0.38 16 29 H 0.07 1.34 6.19 -51.93 -0.32 1.02 16 30 H 0.06 1.41 4.78 -51.93 -0.25 1.16 16 31 H 0.02 0.40 7.25 -51.93 -0.38 0.02 16 32 H 0.26 7.31 8.31 -40.82 -0.34 6.98 16 33 H 0.15 2.07 7.65 -52.49 -0.40 1.66 16 34 H 0.14 1.26 8.06 -52.49 -0.42 0.84 16 35 H 0.14 1.58 8.06 -52.49 -0.42 1.16 16 LS Contribution 301.90 15.07 4.55 4.55 Total: -1.00 -30.37 301.90 -6.92 -37.29 By element: Atomic # 1 Polarization: 3.61 SS G_CDS: -4.20 Total: -0.59 kcal Atomic # 6 Polarization: 3.19 SS G_CDS: -1.86 Total: 1.33 kcal Atomic # 7 Polarization: -46.18 SS G_CDS: 0.33 Total: -45.85 kcal Atomic # 8 Polarization: -11.58 SS G_CDS: 0.07 Total: -11.51 kcal Atomic # 14 Polarization: 21.12 SS G_CDS: -4.39 Total: 16.74 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -1.42 Total: -1.95 kcal Total LS contribution 4.55 Total: 4.55 kcal Total: -30.37 -6.92 -37.29 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000051073240.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.924 kcal (2) G-P(sol) polarization free energy of solvation -30.374 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.549 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.919 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.294 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.630 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds