Wall clock time and date at job start Tue Mar 31 2020 05:26:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.50702 * 109.47012 * 2 1 4 4 C 1.38127 * 119.53945 * 125.00048 * 3 2 1 5 5 C 1.39829 * 119.02865 * 179.74419 * 4 3 2 6 6 C 1.48157 * 120.91189 * 180.27539 * 5 4 3 7 7 O 1.21509 * 120.00021 * 0.02562 * 6 5 4 8 8 N 1.34777 * 119.99637 * 180.02562 * 6 5 4 9 9 C 1.46502 * 119.99963 * 179.97438 * 8 6 5 10 10 H 1.08998 * 109.47040 * 34.99812 * 9 8 6 11 11 C 1.52998 * 109.47058 * 274.99991 * 9 8 6 12 12 C 1.50700 * 109.47154 * 154.99618 * 9 8 6 13 13 H 1.07993 * 120.00066 * 0.02562 * 12 9 8 14 14 C 1.37885 * 119.99717 * 180.02562 * 12 9 8 15 15 N 1.31508 * 120.00015 * 0.02562 * 14 12 9 16 16 Si 1.86796 * 119.99754 * 180.02562 * 14 12 9 17 17 H 1.48506 * 109.47351 * 59.99848 * 16 14 12 18 18 H 1.48501 * 109.47286 * 179.97438 * 16 14 12 19 19 H 1.48499 * 109.47136 * 300.00063 * 16 14 12 20 20 C 1.39785 * 118.17436 * 0.26112 * 5 4 3 21 21 C 1.38305 * 118.98575 * 359.97438 * 20 5 4 22 22 Cl 1.73599 * 119.56717 * 180.02562 * 21 20 5 23 23 N 1.31825 * 119.54244 * 305.25002 * 3 2 1 24 24 H 1.08997 * 109.47255 * 59.99626 * 1 2 3 25 25 H 1.09000 * 109.46722 * 180.02562 * 1 2 3 26 26 H 1.08998 * 109.47198 * 299.99626 * 1 2 3 27 27 H 1.09003 * 109.46795 * 240.00147 * 2 1 3 28 28 H 1.08997 * 109.47255 * 120.00374 * 2 1 3 29 29 H 1.08002 * 120.48841 * 0.02852 * 4 3 2 30 30 H 0.97001 * 120.00353 * 359.97438 * 8 6 5 31 31 H 1.08999 * 109.47184 * 299.99278 * 11 9 8 32 32 H 1.08997 * 109.47507 * 60.00203 * 11 9 8 33 33 H 1.09005 * 109.47078 * 180.02562 * 11 9 8 34 34 H 0.97005 * 119.99855 * 180.02562 * 15 14 12 35 35 H 1.07994 * 120.50785 * 180.02562 * 20 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0324 1.4208 0.0000 4 6 2.9092 1.8331 0.9844 5 6 3.3727 3.1523 0.9711 6 6 4.3188 3.6371 2.0031 7 8 4.7028 2.8848 2.8766 8 7 4.7534 4.9125 1.9729 9 6 5.6884 5.3921 2.9937 10 1 6.3708 4.5877 3.2680 11 6 4.9072 5.8419 4.2299 12 6 6.4763 6.5545 2.4468 13 1 6.2980 6.9016 1.4398 14 6 7.4247 7.1749 3.2322 15 7 7.6421 6.7519 4.4582 16 14 8.4008 8.6162 2.5546 17 1 7.4708 9.7124 2.1818 18 1 9.3487 9.1023 3.5892 19 1 9.1584 8.1803 1.3541 20 6 2.9193 4.0010 -0.0429 21 6 2.0371 3.5064 -0.9863 22 17 1.4648 4.5470 -2.2525 23 7 1.6250 2.2543 -0.9366 24 1 -0.3633 0.5139 -0.8899 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 1.8933 -0.5138 -0.8900 28 1 1.8934 -0.5139 0.8899 29 1 3.2357 1.1455 1.7505 30 1 4.4471 5.5130 1.2754 31 1 4.2248 6.6464 3.9556 32 1 4.3374 5.0012 4.6255 33 1 5.6028 6.1992 4.9892 34 1 8.3091 7.1886 5.0109 35 1 3.2533 5.0269 -0.0894 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000228112062.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:26:34 Heat of formation + Delta-G solvation = -23.638477 kcal Electronic energy + Delta-G solvation = -19233.619465 eV Core-core repulsion = 16063.970189 eV Total energy + Delta-G solvation = -3169.649275 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -40.71287 -38.75375 -36.83873 -34.99750 -34.39767 -32.80067 -32.24411 -30.04030 -28.91711 -25.40747 -25.19300 -23.93110 -22.55997 -20.93756 -19.61624 -18.16477 -16.89603 -16.28293 -15.87065 -15.43371 -15.18094 -15.02464 -14.35761 -14.27751 -14.14679 -13.89231 -13.21688 -12.69837 -12.52772 -12.23293 -11.84552 -11.66812 -11.60111 -11.46307 -11.23340 -11.16168 -11.02424 -10.85800 -10.42780 -10.30602 -10.00519 -9.92427 -9.34131 -9.15033 -9.01845 -8.63852 -8.10625 -6.19374 -4.29497 0.63677 0.75683 1.62969 3.05670 3.22183 3.27661 3.28490 3.68094 3.81795 4.04083 4.29123 4.64998 4.68418 4.85999 5.01863 5.05040 5.11074 5.13399 5.25929 5.51497 5.61782 5.68756 5.84350 5.98512 6.06615 6.27928 6.72680 6.85086 7.03340 7.25895 7.41643 7.52032 7.59407 7.79928 8.04713 8.44889 8.63920 8.87451 9.37861 10.86604 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.021871 B = 0.004119 C = 0.003584 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1279.918865 B = 6796.018108 C = 7811.451142 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.071 4.071 3 C 0.142 3.858 4 C -0.115 4.115 5 C -0.058 4.058 6 C 0.542 3.458 7 O -0.538 6.538 8 N -0.694 5.694 9 C 0.264 3.736 10 H 0.052 0.948 11 C -0.148 4.148 12 C -0.538 4.538 13 H 0.062 0.938 14 C 0.068 3.932 15 N -0.882 5.882 16 Si 0.903 3.097 17 H -0.275 1.275 18 H -0.285 1.285 19 H -0.276 1.276 20 C -0.132 4.132 21 C 0.175 3.825 22 Cl -0.030 7.030 23 N -0.468 5.468 24 H 0.065 0.935 25 H 0.059 0.941 26 H 0.053 0.947 27 H 0.086 0.914 28 H 0.085 0.915 29 H 0.155 0.845 30 H 0.390 0.610 31 H 0.028 0.972 32 H 0.016 0.984 33 H 0.093 0.907 34 H 0.266 0.734 35 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.276 -8.190 -9.772 17.699 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.109 4.109 3 C 0.005 3.995 4 C -0.136 4.136 5 C -0.069 4.069 6 C 0.326 3.674 7 O -0.417 6.417 8 N -0.341 5.341 9 C 0.163 3.837 10 H 0.070 0.930 11 C -0.207 4.207 12 C -0.577 4.577 13 H 0.080 0.920 14 C -0.135 4.135 15 N -0.519 5.519 16 Si 0.730 3.270 17 H -0.201 1.201 18 H -0.211 1.211 19 H -0.201 1.201 20 C -0.154 4.154 21 C 0.011 3.989 22 Cl -0.002 7.002 23 N -0.180 5.180 24 H 0.085 0.915 25 H 0.078 0.922 26 H 0.073 0.927 27 H 0.104 0.896 28 H 0.104 0.896 29 H 0.172 0.828 30 H 0.224 0.776 31 H 0.047 0.953 32 H 0.035 0.965 33 H 0.111 0.889 34 H 0.076 0.924 35 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -12.460 -8.835 -9.675 18.081 hybrid contribution 0.911 1.642 -0.234 1.892 sum -11.549 -7.193 -9.909 16.832 Atomic orbital electron populations 1.21688 0.93900 1.01850 1.02794 1.20527 0.97182 0.89498 1.03719 1.21137 0.93128 0.95846 0.89431 1.22252 0.96195 0.95809 0.99336 1.20785 0.96694 0.94256 0.95176 1.18010 0.81460 0.83488 0.84484 1.90750 1.58135 1.55735 1.37081 1.46556 1.46095 1.09925 1.31569 1.18864 0.86032 0.95038 0.83813 0.92981 1.22092 0.99706 0.97893 1.00969 1.21147 1.20873 1.15546 1.00097 0.91989 1.24876 0.96600 0.97330 0.94744 1.69883 1.33330 1.40993 1.07735 0.86480 0.79730 0.82078 0.78671 1.20075 1.21065 1.20096 1.22072 0.97513 1.01877 0.93944 1.21413 0.95554 0.90229 0.91689 1.98408 1.88370 1.62924 1.50474 1.66579 1.24350 1.02467 1.24598 0.91544 0.92158 0.92748 0.89598 0.89634 0.82765 0.77646 0.95281 0.96531 0.88883 0.92386 0.83153 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.22 9.77 37.16 0.36 -0.85 16 2 C -0.07 -0.64 6.33 -27.88 -0.18 -0.82 16 3 C 0.14 1.75 6.18 -82.63 -0.51 1.24 16 4 C -0.12 -1.58 9.28 -39.03 -0.36 -1.94 16 5 C -0.06 -0.90 5.91 -104.65 -0.62 -1.52 16 6 C 0.54 10.62 7.76 -12.19 -0.09 10.53 16 7 O -0.54 -12.37 16.11 5.36 0.09 -12.28 16 8 N -0.69 -14.04 5.03 -55.78 -0.28 -14.32 16 9 C 0.26 6.52 2.56 -69.08 -0.18 6.34 16 10 H 0.05 1.48 7.58 -51.93 -0.39 1.08 16 11 C -0.15 -3.58 9.26 37.16 0.34 -3.24 16 12 C -0.54 -13.88 8.73 -34.44 -0.30 -14.18 16 13 H 0.06 1.52 7.74 -52.49 -0.41 1.11 16 14 C 0.07 1.79 5.30 -17.82 -0.09 1.70 16 15 N -0.88 -24.28 11.32 55.43 0.63 -23.65 16 16 Si 0.90 20.21 29.54 -169.99 -5.02 15.19 16 17 H -0.28 -6.05 7.11 56.52 0.40 -5.65 16 18 H -0.29 -6.37 7.11 56.52 0.40 -5.97 16 19 H -0.28 -6.13 7.11 56.52 0.40 -5.72 16 20 C -0.13 -1.81 9.38 -38.98 -0.37 -2.17 16 21 C 0.18 2.34 7.27 -17.49 -0.13 2.21 16 22 Cl -0.03 -0.36 29.10 -51.86 -1.51 -1.87 16 23 N -0.47 -6.25 9.82 -6.66 -0.07 -6.31 16 24 H 0.07 0.62 7.94 -51.93 -0.41 0.21 16 25 H 0.06 0.40 8.14 -51.93 -0.42 -0.02 16 26 H 0.05 0.48 8.14 -51.93 -0.42 0.06 16 27 H 0.09 0.70 8.14 -51.93 -0.42 0.28 16 28 H 0.09 0.64 7.87 -51.93 -0.41 0.23 16 29 H 0.15 2.00 7.63 -52.49 -0.40 1.60 16 30 H 0.39 6.77 6.68 -40.82 -0.27 6.50 16 31 H 0.03 0.65 8.14 -51.93 -0.42 0.23 16 32 H 0.02 0.37 8.14 -51.93 -0.42 -0.05 16 33 H 0.09 2.44 6.07 -51.93 -0.32 2.13 16 34 H 0.27 6.97 8.31 -40.82 -0.34 6.63 16 35 H 0.15 1.81 6.54 -52.49 -0.34 1.47 16 LS Contribution 317.02 15.07 4.78 4.78 Total: -1.00 -29.37 317.02 -7.70 -37.08 By element: Atomic # 1 Polarization: 8.30 SS G_CDS: -4.20 Total: 4.10 kcal Atomic # 6 Polarization: -0.59 SS G_CDS: -2.12 Total: -2.71 kcal Atomic # 7 Polarization: -44.57 SS G_CDS: 0.28 Total: -44.29 kcal Atomic # 8 Polarization: -12.37 SS G_CDS: 0.09 Total: -12.28 kcal Atomic # 14 Polarization: 20.21 SS G_CDS: -5.02 Total: 15.19 kcal Atomic # 17 Polarization: -0.36 SS G_CDS: -1.51 Total: -1.87 kcal Total LS contribution 4.78 Total: 4.78 kcal Total: -29.37 -7.70 -37.08 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000228112062.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.437 kcal (2) G-P(sol) polarization free energy of solvation -29.370 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.934 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.705 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.075 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.638 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds