Wall clock time and date at job start Tue Mar 31 2020 05:18:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38351 * 119.45016 * 2 1 4 4 C 1.38345 * 119.34178 * 179.76443 * 3 2 1 5 5 C 1.50701 * 120.84787 * 180.25642 * 4 3 2 6 6 C 1.40018 * 118.30578 * 0.47777 * 4 3 2 7 7 C 1.47761 * 120.56967 * 179.75725 * 6 4 3 8 8 O 1.21563 * 119.99883 * 269.72116 * 7 6 4 9 9 N 1.34777 * 119.99834 * 89.71815 * 7 6 4 10 10 C 1.46499 * 119.99665 * 179.72378 * 9 7 6 11 11 C 1.53004 * 109.47198 * 180.27868 * 10 9 7 12 12 C 1.50700 * 109.47208 * 180.02562 * 11 10 9 13 13 H 1.08002 * 119.99770 * 359.97438 * 12 11 10 14 14 C 1.37876 * 119.99720 * 179.97438 * 12 11 10 15 15 N 1.31522 * 119.99480 * 179.97438 * 14 12 11 16 16 Si 1.86800 * 120.00435 * 0.02562 * 14 12 11 17 17 H 1.48498 * 109.47109 * 89.99679 * 16 14 12 18 18 H 1.48498 * 109.47278 * 210.00109 * 16 14 12 19 19 H 1.48502 * 109.46821 * 330.00292 * 16 14 12 20 20 C 1.39711 * 118.86174 * 359.47877 * 6 4 3 21 21 Cl 1.73599 * 119.73867 * 180.27621 * 20 6 4 22 22 N 1.31820 * 120.52447 * 0.30410 * 20 6 4 23 23 H 1.08994 * 109.47143 * 270.02457 * 1 2 3 24 24 H 1.08997 * 109.46872 * 30.02330 * 1 2 3 25 25 H 1.09006 * 109.47150 * 150.02110 * 1 2 3 26 26 H 1.07997 * 120.32596 * 0.02562 * 3 2 1 27 27 H 1.09004 * 109.47406 * 270.22068 * 5 4 3 28 28 H 1.08999 * 109.46850 * 30.22606 * 5 4 3 29 29 H 1.09007 * 109.47336 * 150.22533 * 5 4 3 30 30 H 0.97001 * 120.00485 * 0.02562 * 9 7 6 31 31 H 1.09009 * 109.47454 * 300.27637 * 10 9 7 32 32 H 1.08998 * 109.47492 * 60.27932 * 10 9 7 33 33 H 1.08995 * 109.46638 * 300.00121 * 11 10 9 34 34 H 1.09006 * 109.47139 * 60.00254 * 11 10 9 35 35 H 0.97004 * 119.99239 * 179.97438 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1872 1.2047 0.0000 4 6 3.5707 1.2021 0.0050 5 6 4.3458 2.4945 0.0109 6 6 4.2323 -0.0319 -0.0005 7 6 5.7086 -0.0930 -0.0009 8 8 6.3155 -0.1187 -1.0539 9 7 6.3823 -0.1202 1.1661 10 6 7.8458 -0.1869 1.1656 11 6 8.3556 -0.2128 2.6079 12 6 9.8611 -0.2808 2.6074 13 1 10.4003 -0.3037 1.6719 14 6 10.5500 -0.3137 3.8013 15 7 11.8639 -0.3736 3.8008 16 14 9.6174 -0.2748 5.4194 17 1 9.3076 -1.6632 5.8456 18 1 10.4507 0.3868 6.4552 19 1 8.3524 0.4828 5.2434 20 6 3.4726 -1.2044 0.0005 21 17 4.2694 -2.7467 0.0012 22 7 2.1556 -1.1488 0.0004 23 1 -0.3633 0.0004 1.0276 24 1 -0.3633 0.8898 -0.5142 25 1 -0.3634 -0.8902 -0.5135 26 1 1.6436 2.1379 0.0004 27 1 4.5330 2.8107 -1.0153 28 1 3.7693 3.2615 0.5281 29 1 5.2959 2.3460 0.5243 30 1 5.8980 -0.1000 2.0063 31 1 8.1681 -1.0916 0.6500 32 1 8.2492 0.6866 0.6533 33 1 8.0333 0.6919 3.1234 34 1 7.9523 -1.0863 3.1203 35 1 12.3486 -0.3964 4.6407 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000273145265.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:18:36 Heat of formation + Delta-G solvation = -25.982941 kcal Electronic energy + Delta-G solvation = -19257.340149 eV Core-core repulsion = 16087.589210 eV Total energy + Delta-G solvation = -3169.750939 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.96704 -39.01277 -36.87611 -35.07467 -34.52324 -32.94432 -32.69655 -30.33539 -28.67195 -27.87191 -25.11904 -23.67738 -22.01647 -20.87183 -20.41510 -17.67419 -17.52220 -16.94868 -16.38890 -15.72519 -15.03270 -14.75949 -14.65252 -14.20463 -13.71445 -13.60817 -13.37925 -13.16171 -13.12443 -12.93913 -12.69565 -12.62153 -12.09282 -11.56443 -11.52874 -11.40973 -11.24036 -10.50938 -10.43748 -10.16221 -9.98484 -9.84296 -9.58365 -9.34133 -9.11054 -8.70699 -8.60620 -6.13157 -4.13497 0.44973 0.74570 1.56269 2.65120 3.11594 3.24018 3.31696 3.32350 3.38526 3.98274 4.17191 4.35821 4.50187 4.65172 4.74257 4.97142 5.06045 5.19484 5.19819 5.20456 5.30412 5.47154 5.55970 5.73906 5.81495 6.03363 6.13467 6.14985 6.50935 6.61171 7.07741 7.18971 7.36812 7.63090 7.73092 8.33437 8.42923 8.91040 9.46866 10.99820 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.022538 B = 0.004083 C = 0.003977 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1242.054464 B = 6855.239783 C = 7038.450164 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C 0.157 3.843 3 C -0.175 4.175 4 C 0.008 3.992 5 C -0.125 4.125 6 C -0.166 4.166 7 C 0.562 3.438 8 O -0.525 6.525 9 N -0.713 5.713 10 C 0.129 3.871 11 C -0.022 4.022 12 C -0.523 4.523 13 H 0.076 0.924 14 C 0.070 3.930 15 N -0.898 5.898 16 Si 0.881 3.119 17 H -0.276 1.276 18 H -0.286 1.286 19 H -0.266 1.266 20 C 0.213 3.787 21 Cl -0.011 7.011 22 N -0.483 5.483 23 H 0.084 0.916 24 H 0.080 0.920 25 H 0.081 0.919 26 H 0.148 0.852 27 H 0.088 0.912 28 H 0.081 0.919 29 H 0.080 0.920 30 H 0.398 0.602 31 H 0.066 0.934 32 H 0.066 0.934 33 H 0.022 0.978 34 H 0.019 0.981 35 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -23.900 4.006 -5.456 24.840 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C 0.020 3.980 3 C -0.195 4.195 4 C 0.000 4.000 5 C -0.181 4.181 6 C -0.173 4.173 7 C 0.344 3.656 8 O -0.401 6.401 9 N -0.362 5.362 10 C 0.008 3.992 11 C -0.060 4.060 12 C -0.561 4.561 13 H 0.094 0.906 14 C -0.132 4.132 15 N -0.536 5.536 16 Si 0.708 3.292 17 H -0.202 1.202 18 H -0.212 1.212 19 H -0.191 1.191 20 C 0.047 3.953 21 Cl 0.018 6.982 22 N -0.195 5.195 23 H 0.102 0.898 24 H 0.099 0.901 25 H 0.100 0.900 26 H 0.165 0.835 27 H 0.107 0.893 28 H 0.100 0.900 29 H 0.099 0.901 30 H 0.231 0.769 31 H 0.084 0.916 32 H 0.084 0.916 33 H 0.040 0.960 34 H 0.037 0.963 35 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -23.646 3.066 -6.092 24.610 hybrid contribution -0.031 0.467 1.345 1.424 sum -23.677 3.533 -4.747 24.405 Atomic orbital electron populations 1.20785 0.87774 1.04011 1.03643 1.21332 0.97161 0.87041 0.92461 1.21862 0.93631 0.99719 1.04253 1.20376 0.93746 0.94284 0.91576 1.20967 1.00419 0.92690 1.04058 1.20697 0.95693 0.92988 1.07912 1.17783 0.85473 0.77401 0.84907 1.90817 1.68839 1.49395 1.31099 1.46343 1.09490 1.72957 1.07420 1.21605 0.75274 1.01905 1.00434 1.19803 0.98052 0.96960 0.91165 1.20897 0.88668 1.51643 0.94924 0.90557 1.24992 0.94756 0.94341 0.99119 1.69907 1.06367 1.50231 1.27081 0.86769 0.80187 0.78636 0.83596 1.20174 1.21240 1.19101 1.21640 0.89319 0.87400 0.96904 1.98455 1.76631 1.27085 1.96025 1.66887 1.07658 1.30092 1.14878 0.89766 0.90112 0.89991 0.83460 0.89338 0.89971 0.90146 0.76886 0.91583 0.91585 0.95952 0.96324 0.92524 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.64 10.16 36.01 0.37 -0.27 16 2 C 0.16 1.57 6.78 -82.51 -0.56 1.01 16 3 C -0.17 -1.56 9.43 -39.50 -0.37 -1.94 16 4 C 0.01 0.09 5.95 -103.92 -0.62 -0.52 16 5 C -0.12 -1.18 9.69 36.01 0.35 -0.83 16 6 C -0.17 -2.37 5.65 -104.79 -0.59 -2.97 16 7 C 0.56 9.49 4.94 -12.37 -0.06 9.43 16 8 O -0.53 -10.72 17.11 5.31 0.09 -10.63 16 9 N -0.71 -11.82 5.55 -61.27 -0.34 -12.16 16 10 C 0.13 2.58 5.61 -4.04 -0.02 2.56 16 11 C -0.02 -0.50 4.16 -27.88 -0.12 -0.61 16 12 C -0.52 -14.45 9.66 -34.44 -0.33 -14.79 16 13 H 0.08 2.29 7.99 -52.49 -0.42 1.87 16 14 C 0.07 1.98 5.47 -17.82 -0.10 1.89 16 15 N -0.90 -27.13 13.96 55.43 0.77 -26.36 16 16 Si 0.88 20.89 27.47 -169.99 -4.67 16.22 16 17 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 18 H -0.29 -6.77 7.11 56.52 0.40 -6.37 16 19 H -0.27 -5.95 6.54 56.52 0.37 -5.58 16 20 C 0.21 3.06 7.31 -17.01 -0.12 2.94 16 21 Cl -0.01 -0.16 28.20 -51.86 -1.46 -1.62 16 22 N -0.48 -6.30 10.24 -6.27 -0.06 -6.37 16 23 H 0.08 0.42 8.14 -51.93 -0.42 0.00 16 24 H 0.08 0.31 8.07 -51.93 -0.42 -0.11 16 25 H 0.08 0.53 8.14 -51.93 -0.42 0.10 16 26 H 0.15 0.80 8.06 -52.49 -0.42 0.38 16 27 H 0.09 0.81 8.14 -51.93 -0.42 0.38 16 28 H 0.08 0.54 8.10 -51.93 -0.42 0.12 16 29 H 0.08 0.89 7.19 -51.93 -0.37 0.52 16 30 H 0.40 5.72 8.46 -40.82 -0.35 5.38 16 31 H 0.07 1.40 8.14 -51.92 -0.42 0.98 16 32 H 0.07 1.36 8.14 -51.93 -0.42 0.94 16 33 H 0.02 0.49 7.20 -51.93 -0.37 0.11 16 34 H 0.02 0.41 7.57 -51.93 -0.39 0.02 16 35 H 0.26 7.47 8.31 -40.82 -0.34 7.13 16 LS Contribution 319.75 15.07 4.82 4.82 Total: -1.00 -32.91 319.75 -7.48 -40.39 By element: Atomic # 1 Polarization: 4.26 SS G_CDS: -4.45 Total: -0.19 kcal Atomic # 6 Polarization: -1.92 SS G_CDS: -2.18 Total: -4.10 kcal Atomic # 7 Polarization: -45.26 SS G_CDS: 0.37 Total: -44.89 kcal Atomic # 8 Polarization: -10.72 SS G_CDS: 0.09 Total: -10.63 kcal Atomic # 14 Polarization: 20.89 SS G_CDS: -4.67 Total: 16.22 kcal Atomic # 17 Polarization: -0.16 SS G_CDS: -1.46 Total: -1.62 kcal Total LS contribution 4.82 Total: 4.82 kcal Total: -32.91 -7.48 -40.39 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000273145265.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.408 kcal (2) G-P(sol) polarization free energy of solvation -32.908 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.500 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.483 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.391 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.983 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds