Wall clock time and date at job start Tue Mar 31 2020 06:21:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.35636 * 125.67755 * 2 1 4 4 C 1.35511 * 108.85379 * 179.89398 * 3 2 1 5 5 Cl 1.73599 * 126.07541 * 180.12352 * 4 3 2 6 6 C 1.39894 * 107.85347 * 0.36768 * 4 3 2 7 7 C 1.37645 * 125.67876 * 180.31095 * 2 1 3 8 8 C 1.46664 * 126.22237 * 359.93902 * 7 2 1 9 9 O 1.21691 * 120.00147 * 172.73054 * 8 7 2 10 10 N 1.34783 * 120.00091 * 352.72945 * 8 7 2 11 11 C 1.46497 * 119.99934 * 186.15546 * 10 8 7 12 12 C 1.53003 * 109.46926 * 174.99880 * 11 10 8 13 13 C 1.50705 * 115.54628 * 306.38894 * 12 11 10 14 14 H 1.07996 * 119.99755 * 144.26706 * 13 12 11 15 15 C 1.37883 * 120.00059 * 324.26290 * 13 12 11 16 16 N 1.31514 * 119.99801 * 2.81771 * 15 13 12 17 17 Si 1.86795 * 119.99782 * 182.81589 * 15 13 12 18 18 H 1.48495 * 109.47256 * 90.00215 * 17 15 13 19 19 H 1.48500 * 109.47023 * 210.00157 * 17 15 13 20 20 H 1.48501 * 109.47236 * 329.99872 * 17 15 13 21 21 C 1.53000 * 117.50143 * 160.72411 * 12 11 10 22 22 C 1.52996 * 117.50154 * 92.05771 * 12 11 10 23 23 H 1.09006 * 109.47125 * 256.57463 * 1 2 3 24 24 H 1.09007 * 109.46826 * 136.58079 * 1 2 3 25 25 H 1.08990 * 109.47578 * 16.57821 * 1 2 3 26 26 H 1.07997 * 125.56942 * 0.03696 * 3 2 1 27 27 H 1.07997 * 126.45381 * 179.74341 * 6 4 3 28 28 H 0.97002 * 119.99429 * 6.15962 * 10 8 7 29 29 H 1.09004 * 109.47203 * 294.99114 * 11 10 8 30 30 H 1.09000 * 109.47371 * 54.99593 * 11 10 8 31 31 H 0.97004 * 119.99419 * 185.00764 * 16 15 13 32 32 H 1.09009 * 117.49555 * 359.97438 * 21 12 11 33 33 H 1.08992 * 117.50327 * 145.01857 * 21 12 11 34 34 H 1.08997 * 117.49949 * 214.98007 * 22 12 11 35 35 H 1.08996 * 117.49905 * 359.97438 * 22 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2560 1.1018 0.0000 4 6 3.5531 0.7096 0.0024 5 17 4.9377 1.7568 0.0063 6 6 3.5783 -0.6891 -0.0046 7 6 2.2678 -1.1181 -0.0061 8 6 1.8121 -2.5121 -0.0124 9 8 2.6167 -3.4146 -0.1508 10 7 0.5023 -2.7937 0.1351 11 6 0.0623 -4.1851 0.2642 12 6 -1.4418 -4.2205 0.5426 13 6 -1.9058 -3.3924 1.7131 14 1 -2.8589 -2.8862 1.6724 15 6 -1.1135 -3.2811 2.8360 16 7 0.0711 -3.8517 2.8642 17 14 -1.7226 -2.3198 4.3173 18 1 -2.4581 -3.2310 5.2305 19 1 -0.5642 -1.7292 5.0346 20 1 -2.6298 -1.2348 3.8644 21 6 -2.1804 -5.5320 0.2681 22 6 -2.3805 -4.3315 -0.6605 23 1 -0.3634 -0.2386 0.9996 24 1 -0.3633 -0.7465 -0.7064 25 1 -0.3634 0.9848 -0.2932 26 1 1.9088 2.1244 0.0006 27 1 4.4583 -1.3151 -0.0087 28 1 -0.1489 -2.0751 0.1557 29 1 0.2730 -4.7202 -0.6617 30 1 0.5955 -4.6599 1.0878 31 1 0.5979 -3.8355 3.6785 32 1 -1.5948 -6.3695 -0.1112 33 1 -3.0022 -5.7957 0.9338 34 1 -3.3338 -3.8060 -0.6052 35 1 -1.9266 -4.3789 -1.6503 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000331840181.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:21:48 Heat of formation + Delta-G solvation = 38.092997 kcal Electronic energy + Delta-G solvation = -20217.840820 eV Core-core repulsion = 17050.868422 eV Total energy + Delta-G solvation = -3166.972398 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -41.25096 -38.41222 -36.69567 -36.28934 -33.66778 -32.38726 -32.09198 -29.26131 -26.51177 -26.11541 -25.39122 -21.89207 -21.29734 -20.48016 -19.61131 -19.11392 -17.51922 -16.40537 -15.53790 -15.41175 -14.90853 -14.79165 -14.24298 -13.94126 -13.67448 -13.59212 -13.01231 -12.87133 -12.76969 -12.54724 -11.93203 -11.83830 -11.55732 -11.30443 -11.17384 -10.82293 -10.69935 -10.62069 -10.35412 -9.86352 -9.33948 -9.06011 -8.95299 -8.52184 -8.39988 -8.16317 -7.85097 -6.12085 -4.31628 1.75591 2.23720 2.66717 3.08467 3.12080 3.21245 3.23405 3.88570 4.13290 4.20659 4.75669 4.84269 4.91826 5.14200 5.30734 5.37022 5.50343 5.60734 5.91631 6.00066 6.10403 6.20730 6.43224 6.51497 6.62210 6.66523 6.80997 6.92332 7.02131 7.16003 7.16721 7.45311 7.52739 7.85593 8.18908 8.43043 8.70857 9.02106 9.32323 10.78839 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.019189 B = 0.005503 C = 0.004911 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1458.821411 B = 5086.757576 C = 5700.410671 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.055 3.945 2 N -0.420 5.420 3 C 0.022 3.978 4 C -0.125 4.125 5 Cl -0.060 7.060 6 C -0.114 4.114 7 C -0.017 4.017 8 C 0.579 3.421 9 O -0.547 6.547 10 N -0.685 5.685 11 C 0.163 3.837 12 C 0.034 3.966 13 C -0.501 4.501 14 H 0.061 0.939 15 C 0.075 3.925 16 N -0.864 5.864 17 Si 0.888 3.112 18 H -0.278 1.278 19 H -0.285 1.285 20 H -0.273 1.273 21 C -0.196 4.196 22 C -0.214 4.214 23 H 0.096 0.904 24 H 0.093 0.907 25 H 0.095 0.905 26 H 0.173 0.827 27 H 0.153 0.847 28 H 0.394 0.606 29 H 0.022 0.978 30 H 0.117 0.883 31 H 0.265 0.735 32 H 0.068 0.932 33 H 0.080 0.920 34 H 0.076 0.924 35 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.360 9.850 -5.233 11.236 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.095 5.095 3 C -0.114 4.114 4 C -0.158 4.158 5 Cl -0.031 7.031 6 C -0.140 4.140 7 C -0.130 4.130 8 C 0.364 3.636 9 O -0.426 6.426 10 N -0.335 5.335 11 C 0.040 3.960 12 C 0.033 3.967 13 C -0.538 4.538 14 H 0.080 0.920 15 C -0.130 4.130 16 N -0.499 5.499 17 Si 0.715 3.285 18 H -0.203 1.203 19 H -0.211 1.211 20 H -0.198 1.198 21 C -0.235 4.235 22 C -0.251 4.251 23 H 0.114 0.886 24 H 0.111 0.889 25 H 0.114 0.886 26 H 0.190 0.810 27 H 0.171 0.829 28 H 0.233 0.767 29 H 0.040 0.960 30 H 0.135 0.865 31 H 0.075 0.925 32 H 0.086 0.914 33 H 0.099 0.901 34 H 0.094 0.906 35 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges 1.805 9.248 -5.191 10.757 hybrid contribution -0.673 0.899 0.969 1.483 sum 1.132 10.147 -4.222 11.048 Atomic orbital electron populations 1.22460 0.75826 1.04925 1.05413 1.44006 1.06717 1.05364 1.53417 1.21556 0.88951 0.92023 1.08918 1.19840 0.87592 0.91231 1.17131 1.98295 1.41293 1.65760 1.97797 1.21051 0.95641 0.92310 1.04989 1.20867 0.90109 0.87376 1.14676 1.16842 0.83257 0.85479 0.78062 1.90768 1.54131 1.45865 1.51801 1.46018 1.06019 1.11053 1.70447 1.21140 0.94712 0.80587 0.99516 1.19250 0.89056 0.95401 0.92982 1.20496 1.04018 1.30381 0.98922 0.92049 1.25007 0.94197 0.95313 0.98494 1.69859 1.09840 1.43003 1.27238 0.86649 0.78423 0.80293 0.83096 1.20340 1.21061 1.19805 1.22933 1.04599 0.92346 1.03577 1.22982 1.02529 1.04772 0.94836 0.88597 0.88852 0.88630 0.80953 0.82883 0.76749 0.95969 0.86541 0.92470 0.91356 0.90129 0.90586 0.91309 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.66 9.41 59.84 0.56 1.22 16 2 N -0.42 -6.21 3.16 -120.19 -0.38 -6.59 16 3 C 0.02 0.28 11.33 -16.84 -0.19 0.09 16 4 C -0.12 -1.85 6.66 -39.94 -0.27 -2.11 16 5 Cl -0.06 -0.78 29.30 -51.86 -1.52 -2.30 16 6 C -0.11 -1.96 10.65 -39.09 -0.42 -2.38 16 7 C -0.02 -0.31 6.88 -81.98 -0.56 -0.87 16 8 C 0.58 12.48 7.76 -12.86 -0.10 12.38 16 9 O -0.55 -13.49 16.90 5.20 0.09 -13.41 16 10 N -0.69 -14.36 4.95 -61.62 -0.31 -14.66 16 11 C 0.16 3.75 4.62 -4.04 -0.02 3.73 16 12 C 0.03 0.76 2.03 -155.66 -0.32 0.44 16 13 C -0.50 -11.96 8.41 -34.44 -0.29 -12.25 16 14 H 0.06 1.45 7.81 -52.49 -0.41 1.04 16 15 C 0.07 1.83 5.29 -17.82 -0.09 1.73 16 16 N -0.86 -22.34 10.20 55.43 0.57 -21.77 16 17 Si 0.89 19.22 29.54 -169.99 -5.02 14.20 16 18 H -0.28 -6.12 7.11 56.52 0.40 -5.72 16 19 H -0.28 -6.32 7.11 56.52 0.40 -5.92 16 20 H -0.27 -5.71 7.11 56.52 0.40 -5.31 16 21 C -0.20 -4.09 9.96 -26.69 -0.27 -4.36 16 22 C -0.21 -4.18 9.92 -26.69 -0.26 -4.45 16 23 H 0.10 1.28 7.92 -51.93 -0.41 0.87 16 24 H 0.09 1.15 6.45 -51.93 -0.34 0.81 16 25 H 0.10 0.77 8.09 -51.93 -0.42 0.35 16 26 H 0.17 1.64 8.06 -52.49 -0.42 1.21 16 27 H 0.15 2.60 8.06 -52.49 -0.42 2.18 16 28 H 0.39 7.47 3.75 -40.82 -0.15 7.32 16 29 H 0.02 0.50 8.08 -51.93 -0.42 0.08 16 30 H 0.12 3.08 5.97 -51.93 -0.31 2.77 16 31 H 0.26 6.78 8.32 -40.82 -0.34 6.44 16 32 H 0.07 1.35 8.14 -51.92 -0.42 0.93 16 33 H 0.08 1.68 8.14 -51.93 -0.42 1.26 16 34 H 0.08 1.43 8.14 -51.93 -0.42 1.00 16 35 H 0.07 1.26 8.14 -51.93 -0.42 0.83 16 LS Contribution 313.38 15.07 4.72 4.72 Total: -1.00 -28.24 313.38 -8.21 -36.45 By element: Atomic # 1 Polarization: 14.29 SS G_CDS: -4.13 Total: 10.16 kcal Atomic # 6 Polarization: -4.58 SS G_CDS: -2.22 Total: -6.81 kcal Atomic # 7 Polarization: -42.90 SS G_CDS: -0.12 Total: -43.02 kcal Atomic # 8 Polarization: -13.49 SS G_CDS: 0.09 Total: -13.41 kcal Atomic # 14 Polarization: 19.22 SS G_CDS: -5.02 Total: 14.20 kcal Atomic # 17 Polarization: -0.78 SS G_CDS: -1.52 Total: -2.30 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -28.24 -8.21 -36.45 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000331840181.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 74.544 kcal (2) G-P(sol) polarization free energy of solvation -28.245 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.299 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.206 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.451 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.093 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds