Wall clock time and date at job start Tue Mar 31 2020 05:17:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38515 * 120.86484 * 2 1 4 4 Cl 1.73598 * 120.35511 * 359.74581 * 3 2 1 5 5 C 1.38418 * 119.28026 * 180.02562 * 3 2 1 6 6 N 1.31942 * 121.06389 * 359.97438 * 5 3 2 7 7 C 1.31665 * 121.89202 * 0.02562 * 6 5 3 8 8 C 1.39555 * 120.59659 * 359.97438 * 7 6 5 9 9 C 1.47842 * 120.55531 * 180.02562 * 8 7 6 10 10 O 1.21552 * 120.00590 * 126.60339 * 9 8 7 11 11 N 1.34779 * 119.99800 * 306.60528 * 9 8 7 12 12 C 1.46502 * 120.00015 * 4.24581 * 11 9 8 13 13 C 1.46501 * 119.99942 * 184.24843 * 11 9 8 14 14 H 1.08990 * 109.47147 * 359.97438 * 13 11 9 15 15 C 1.53001 * 109.47101 * 239.99543 * 13 11 9 16 16 C 1.50701 * 109.47130 * 119.99923 * 13 11 9 17 17 H 1.07995 * 119.99935 * 359.97438 * 16 13 11 18 18 C 1.37875 * 120.00003 * 179.97438 * 16 13 11 19 19 N 1.31518 * 120.00074 * 0.02562 * 18 16 13 20 20 Si 1.86804 * 120.00124 * 179.97438 * 18 16 13 21 21 H 1.48492 * 109.46894 * 0.02562 * 20 18 16 22 22 H 1.48497 * 109.47008 * 120.00225 * 20 18 16 23 23 H 1.48501 * 109.47056 * 240.00312 * 20 18 16 24 24 H 1.09000 * 109.46819 * 85.15714 * 1 2 3 25 25 H 1.09003 * 109.47147 * 205.15726 * 1 2 3 26 26 H 1.08995 * 109.46825 * 325.15666 * 1 2 3 27 27 H 1.08007 * 119.46699 * 179.97438 * 5 3 2 28 28 H 1.08005 * 119.69960 * 179.97438 * 7 6 5 29 29 H 1.08997 * 109.47215 * 84.60801 * 12 11 9 30 30 H 1.09006 * 109.47234 * 204.61274 * 12 11 9 31 31 H 1.08999 * 109.47248 * 324.60918 * 12 11 9 32 32 H 1.08993 * 109.47417 * 180.02562 * 15 13 11 33 33 H 1.09004 * 109.47238 * 300.00453 * 15 13 11 34 34 H 1.09004 * 109.46639 * 59.99865 * 15 13 11 35 35 H 0.97003 * 120.00084 * 179.97438 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2176 1.1890 0.0000 4 17 1.3819 2.7105 -0.0066 5 6 3.6013 1.1507 -0.0005 6 7 4.2506 0.0021 -0.0005 7 6 3.6197 -1.1536 -0.0005 8 6 2.2250 -1.2015 0.0000 9 6 1.5176 -2.4997 0.0006 10 8 0.6759 -2.7329 0.8460 11 7 1.8060 -3.4246 -0.9363 12 6 2.8843 -3.1819 -1.8979 13 6 1.0411 -4.6728 -0.9932 14 1 0.2881 -4.6737 -0.2053 15 6 1.9863 -5.8597 -0.7961 16 6 0.3648 -4.7868 -2.3352 17 1 0.4917 -4.0073 -3.0717 18 6 -0.4159 -5.8863 -2.6225 19 7 -0.5709 -6.8354 -1.7253 20 14 -1.2548 -6.0273 -4.2856 21 1 -0.9241 -4.8368 -5.1092 22 1 -0.7813 -7.2536 -4.9764 23 1 -2.7253 -6.1039 -4.0934 24 1 -0.3633 0.0868 -1.0240 25 1 -0.3633 -0.9302 0.4369 26 1 -0.3633 0.8434 0.5871 27 1 4.1584 2.0760 -0.0010 28 1 4.1868 -2.0728 -0.0010 29 1 3.8371 -3.4744 -1.4568 30 1 2.7060 -3.7680 -2.7995 31 1 2.9120 -2.1225 -2.1529 32 1 1.4173 -6.7883 -0.8389 33 1 2.7397 -5.8589 -1.5839 34 1 2.4755 -5.7771 0.1745 35 1 -1.1205 -7.6087 -1.9273 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000334571630.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:17:30 Heat of formation + Delta-G solvation = -7.219898 kcal Electronic energy + Delta-G solvation = -20092.266956 eV Core-core repulsion = 16923.329644 eV Total energy + Delta-G solvation = -3168.937312 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -40.74909 -38.72004 -36.80681 -35.58528 -33.78795 -33.07365 -31.36863 -29.32964 -27.91106 -26.34986 -25.29835 -24.40815 -22.55215 -21.21525 -18.93869 -17.29778 -16.91864 -16.58510 -16.26347 -15.74346 -15.08634 -14.62733 -14.33158 -14.14665 -13.44435 -12.99779 -12.91927 -12.88035 -12.59451 -12.23765 -12.17019 -11.84726 -11.70227 -11.55251 -11.31721 -11.11359 -10.91077 -10.80479 -10.32728 -10.25471 -10.00813 -9.48518 -9.27999 -9.14859 -8.98457 -8.50509 -7.75656 -6.14911 -4.23499 0.64490 0.92746 1.83503 3.07356 3.21444 3.29915 3.32237 3.51113 3.77818 4.25103 4.33027 4.46942 4.58080 4.72383 5.10937 5.16627 5.25700 5.42702 5.64828 5.66777 5.68221 5.88045 6.00532 6.21976 6.27330 6.39409 6.68032 6.75189 6.96891 7.27493 7.41023 7.62262 7.64149 7.91891 8.08796 8.35150 8.68053 8.86270 9.43321 10.90423 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.023958 B = 0.004762 C = 0.004413 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1168.440190 B = 5878.752119 C = 6343.646160 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C 0.014 3.986 3 C -0.099 4.099 4 Cl -0.053 7.053 5 C 0.123 3.877 6 N -0.476 5.476 7 C 0.134 3.866 8 C -0.155 4.155 9 C 0.553 3.447 10 O -0.537 6.537 11 N -0.579 5.579 12 C 0.079 3.921 13 C 0.257 3.743 14 H 0.065 0.935 15 C -0.147 4.147 16 C -0.528 4.528 17 H 0.061 0.939 18 C 0.066 3.934 19 N -0.886 5.886 20 Si 0.899 3.101 21 H -0.273 1.273 22 H -0.283 1.283 23 H -0.283 1.283 24 H 0.084 0.916 25 H 0.102 0.898 26 H 0.078 0.922 27 H 0.166 0.834 28 H 0.169 0.831 29 H 0.047 0.953 30 H 0.087 0.913 31 H 0.051 0.949 32 H 0.095 0.905 33 H 0.031 0.969 34 H 0.013 0.987 35 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.163 13.867 1.277 15.660 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.194 4.194 2 C 0.005 3.995 3 C -0.128 4.128 4 Cl -0.024 7.024 5 C -0.034 4.034 6 N -0.184 5.184 7 C -0.023 4.023 8 C -0.160 4.160 9 C 0.338 3.662 10 O -0.416 6.416 11 N -0.309 5.309 12 C -0.065 4.065 13 C 0.158 3.842 14 H 0.083 0.917 15 C -0.205 4.205 16 C -0.567 4.567 17 H 0.079 0.921 18 C -0.136 4.136 19 N -0.523 5.523 20 Si 0.726 3.274 21 H -0.198 1.198 22 H -0.209 1.209 23 H -0.209 1.209 24 H 0.102 0.898 25 H 0.121 0.879 26 H 0.097 0.903 27 H 0.183 0.817 28 H 0.186 0.814 29 H 0.065 0.935 30 H 0.106 0.894 31 H 0.070 0.930 32 H 0.113 0.887 33 H 0.050 0.950 34 H 0.032 0.968 35 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges 7.454 13.651 1.721 15.649 hybrid contribution -1.297 0.047 -1.020 1.650 sum 6.158 13.698 0.701 15.035 Atomic orbital electron populations 1.21152 0.88665 1.05879 1.03734 1.20260 0.97949 0.89828 0.91444 1.21862 0.93916 0.87686 1.09367 1.98362 1.78321 1.28855 1.96904 1.22850 0.89271 0.97257 0.94066 1.67840 1.39482 0.97783 1.13328 1.23153 0.90528 0.96607 0.92029 1.21169 0.95248 0.94987 1.04622 1.17879 0.82858 0.82963 0.82533 1.90738 1.33971 1.79102 1.37820 1.48259 1.34086 1.19538 1.29033 1.21748 0.89477 1.00648 0.94597 1.19048 0.89634 0.76916 0.98615 0.91677 1.22093 0.98918 1.03001 0.96530 1.21322 1.30018 1.05788 0.99574 0.92123 1.24884 0.96065 0.95441 0.97257 1.69886 1.38930 1.09640 1.33889 0.86433 0.79372 0.78008 0.83557 1.19807 1.20863 1.20852 0.89773 0.87919 0.90339 0.81714 0.81423 0.93455 0.89408 0.93028 0.88673 0.95015 0.96836 0.92626 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.01 9.29 36.01 0.33 -1.68 16 2 C 0.01 0.21 5.95 -103.87 -0.62 -0.41 16 3 C -0.10 -1.25 6.33 -39.41 -0.25 -1.50 16 4 Cl -0.05 -0.57 27.57 -51.86 -1.43 -2.00 16 5 C 0.12 1.45 10.97 -17.44 -0.19 1.26 16 6 N -0.48 -6.33 10.34 -12.88 -0.13 -6.46 16 7 C 0.13 1.89 9.13 -17.13 -0.16 1.73 16 8 C -0.15 -2.51 4.73 -104.83 -0.50 -3.00 16 9 C 0.55 11.10 6.64 -12.33 -0.08 11.02 16 10 O -0.54 -12.62 14.48 5.32 0.08 -12.54 16 11 N -0.58 -11.83 2.75 -176.38 -0.49 -12.31 16 12 C 0.08 1.29 8.10 59.85 0.48 1.77 16 13 C 0.26 6.30 2.63 -69.08 -0.18 6.11 16 14 H 0.07 1.85 6.90 -51.93 -0.36 1.49 16 15 C -0.15 -3.38 8.97 37.16 0.33 -3.04 16 16 C -0.53 -13.70 7.95 -34.44 -0.27 -13.98 16 17 H 0.06 1.56 7.43 -52.49 -0.39 1.17 16 18 C 0.07 1.75 5.30 -17.82 -0.09 1.65 16 19 N -0.89 -24.28 11.32 55.43 0.63 -23.66 16 20 Si 0.90 20.44 29.54 -169.99 -5.02 15.42 16 21 H -0.27 -6.14 7.11 56.52 0.40 -5.74 16 22 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 23 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 24 H 0.08 1.16 8.14 -51.93 -0.42 0.73 16 25 H 0.10 1.79 5.68 -51.93 -0.29 1.50 16 26 H 0.08 0.98 7.24 -51.93 -0.38 0.61 16 27 H 0.17 1.43 8.06 -52.48 -0.42 1.01 16 28 H 0.17 2.10 6.77 -52.48 -0.36 1.74 16 29 H 0.05 0.65 7.26 -51.93 -0.38 0.27 16 30 H 0.09 1.51 7.11 -51.93 -0.37 1.14 16 31 H 0.05 0.75 6.47 -51.93 -0.34 0.42 16 32 H 0.09 2.41 6.07 -51.93 -0.32 2.10 16 33 H 0.03 0.67 7.67 -51.93 -0.40 0.27 16 34 H 0.01 0.27 8.14 -51.93 -0.42 -0.15 16 35 H 0.26 6.88 8.31 -40.82 -0.34 6.54 16 LS Contribution 304.58 15.07 4.59 4.59 Total: -1.00 -29.04 304.58 -6.94 -35.98 By element: Atomic # 1 Polarization: 5.03 SS G_CDS: -3.97 Total: 1.06 kcal Atomic # 6 Polarization: 1.12 SS G_CDS: -1.19 Total: -0.07 kcal Atomic # 7 Polarization: -42.44 SS G_CDS: 0.01 Total: -42.43 kcal Atomic # 8 Polarization: -12.62 SS G_CDS: 0.08 Total: -12.54 kcal Atomic # 14 Polarization: 20.44 SS G_CDS: -5.02 Total: 15.42 kcal Atomic # 17 Polarization: -0.57 SS G_CDS: -1.43 Total: -2.00 kcal Total LS contribution 4.59 Total: 4.59 kcal Total: -29.04 -6.94 -35.98 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000334571630.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.760 kcal (2) G-P(sol) polarization free energy of solvation -29.040 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.281 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.939 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.980 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.220 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds