Wall clock time and date at job start Tue Mar 31 2020 06:19:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 N 1.46502 * 109.47140 * 2 1 4 4 C 1.46498 * 120.00171 * 270.00041 * 3 2 1 5 5 C 1.50696 * 109.47329 * 270.00120 * 4 3 2 6 6 H 1.08005 * 119.99794 * 359.97438 * 5 4 3 7 7 C 1.37873 * 120.00102 * 180.02562 * 5 4 3 8 8 N 1.31511 * 120.00272 * 179.97438 * 7 5 4 9 9 Si 1.86800 * 120.00036 * 0.02562 * 7 5 4 10 10 H 1.48491 * 109.47354 * 89.99869 * 9 7 5 11 11 H 1.48501 * 109.46929 * 210.00017 * 9 7 5 12 12 H 1.48503 * 109.47002 * 329.99588 * 9 7 5 13 13 C 1.34776 * 119.99587 * 89.99850 * 3 2 1 14 14 O 1.21285 * 119.99863 * 179.97438 * 13 3 2 15 15 C 1.50695 * 120.00456 * 0.02562 * 13 3 2 16 16 C 1.50694 * 109.47575 * 179.97438 * 15 13 3 17 17 C 1.38233 * 119.60308 * 124.99717 * 16 15 13 18 18 C 1.38613 * 119.17625 * 180.02562 * 17 16 15 19 19 C 1.38780 * 118.40577 * 0.25575 * 18 17 16 20 20 Cl 1.73608 * 120.42624 * 179.72626 * 19 18 17 21 21 C 1.38302 * 119.13930 * 359.50003 * 19 18 17 22 22 N 1.31846 * 119.60674 * 305.02221 * 16 15 13 23 23 H 1.08996 * 109.46754 * 59.99647 * 1 2 3 24 24 H 1.08996 * 109.46984 * 179.97438 * 1 2 3 25 25 H 1.09004 * 109.46777 * 299.99935 * 1 2 3 26 26 H 1.09003 * 109.46594 * 240.00587 * 2 1 3 27 27 H 1.08996 * 109.47489 * 120.00240 * 2 1 3 28 28 H 1.09000 * 109.47142 * 30.00316 * 4 3 2 29 29 H 1.08998 * 109.47169 * 149.99849 * 4 3 2 30 30 H 0.97001 * 120.00853 * 179.97438 * 8 7 5 31 31 H 1.09004 * 109.47071 * 59.99079 * 15 13 3 32 32 H 1.08995 * 109.46890 * 299.99796 * 15 13 3 33 33 H 1.08002 * 120.41515 * 0.04798 * 17 16 15 34 34 H 1.08002 * 120.79267 * 179.97438 * 18 17 16 35 35 H 1.08004 * 119.62475 * 180.23223 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.2626 2.0719 -1.2687 5 6 3.6858 1.8351 -1.7038 6 1 4.3429 1.2309 -1.0958 7 6 4.1494 2.3906 -2.8774 8 7 5.3915 2.1844 -3.2569 9 14 3.0135 3.4373 -3.9279 10 1 3.1173 4.8571 -3.5056 11 1 3.4065 3.3152 -5.3547 12 1 1.6136 2.9715 -3.7585 13 6 2.2430 2.0165 1.1672 14 8 2.6477 3.1598 1.1673 15 6 1.9923 1.3059 2.4723 16 6 2.3192 2.2290 3.6178 17 6 1.3646 2.4813 4.5852 18 6 1.6745 3.3322 5.6346 19 6 2.9382 3.9048 5.6692 20 17 3.3797 4.9837 6.9556 21 6 3.8428 3.6010 4.6681 22 7 3.5120 2.7865 3.6850 23 1 -0.3633 0.5139 -0.8899 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 1.8933 -0.5138 -0.8901 27 1 1.8934 -0.5138 0.8899 28 1 1.5817 1.6878 -2.0283 29 1 2.0956 3.1411 -1.1383 30 1 5.7177 2.5749 -4.0828 31 1 2.6228 0.4186 2.5298 32 1 0.9445 1.0114 2.5302 33 1 0.3894 2.0210 4.5243 34 1 0.9483 3.5479 6.4044 35 1 4.8297 4.0392 4.6893 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000339814310.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:19:03 Heat of formation + Delta-G solvation = -4.823391 kcal Electronic energy + Delta-G solvation = -19504.231920 eV Core-core repulsion = 16335.398528 eV Total energy + Delta-G solvation = -3168.833392 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -40.47354 -38.89674 -36.77464 -35.35536 -33.03038 -32.53091 -32.38510 -30.33175 -28.78668 -27.00527 -23.85421 -23.10197 -22.94847 -21.63641 -18.41861 -17.19378 -16.89862 -16.81656 -16.35053 -15.98697 -15.15829 -14.66383 -14.27054 -13.99479 -13.61127 -13.47253 -13.27386 -13.15840 -12.54619 -12.33046 -12.21671 -12.10528 -11.82107 -11.64767 -11.35848 -11.33510 -10.94923 -10.69751 -10.47566 -10.13076 -9.93167 -9.50360 -9.46165 -9.08945 -8.76461 -8.55191 -7.68767 -6.04700 -4.02980 0.83782 1.11927 1.89200 3.31038 3.36741 3.37764 3.38982 3.53658 3.91714 4.25616 4.42630 4.52668 4.61575 4.80802 5.02048 5.15353 5.24820 5.30145 5.33796 5.49616 5.54879 5.60333 5.70060 5.79621 5.89404 5.98385 6.14976 6.37215 6.42630 6.73856 6.97769 7.38321 7.65225 7.94936 8.27878 8.51390 8.97941 9.03915 9.55713 11.08847 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.020786 B = 0.004218 C = 0.003733 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1346.746678 B = 6635.902932 C = 7498.116731 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C 0.105 3.895 3 N -0.595 5.595 4 C 0.218 3.782 5 C -0.526 4.526 6 H 0.075 0.925 7 C 0.072 3.928 8 N -0.898 5.898 9 Si 0.875 3.125 10 H -0.274 1.274 11 H -0.285 1.285 12 H -0.266 1.266 13 C 0.514 3.486 14 O -0.523 6.523 15 C -0.096 4.096 16 C 0.157 3.843 17 C -0.159 4.159 18 C -0.068 4.068 19 C -0.098 4.098 20 Cl -0.064 7.064 21 C 0.123 3.877 22 N -0.433 5.433 23 H 0.059 0.941 24 H 0.062 0.938 25 H 0.051 0.949 26 H 0.085 0.915 27 H 0.068 0.932 28 H 0.029 0.971 29 H 0.035 0.965 30 H 0.264 0.736 31 H 0.111 0.889 32 H 0.104 0.896 33 H 0.143 0.857 34 H 0.143 0.857 35 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.101 -2.777 17.599 20.992 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C -0.019 4.019 3 N -0.327 5.327 4 C 0.098 3.902 5 C -0.565 4.565 6 H 0.093 0.907 7 C -0.130 4.130 8 N -0.537 5.537 9 Si 0.702 3.298 10 H -0.200 1.200 11 H -0.211 1.211 12 H -0.191 1.191 13 C 0.300 3.700 14 O -0.398 6.398 15 C -0.137 4.137 16 C 0.019 3.981 17 C -0.179 4.179 18 C -0.095 4.095 19 C -0.127 4.127 20 Cl -0.036 7.036 21 C -0.035 4.035 22 N -0.141 5.141 23 H 0.078 0.922 24 H 0.080 0.920 25 H 0.070 0.930 26 H 0.103 0.897 27 H 0.086 0.914 28 H 0.047 0.953 29 H 0.053 0.947 30 H 0.074 0.926 31 H 0.129 0.871 32 H 0.123 0.877 33 H 0.161 0.839 34 H 0.161 0.839 35 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges -10.098 -2.206 16.878 19.791 hybrid contribution -1.016 0.804 0.099 1.300 sum -11.114 -1.402 16.977 20.340 Atomic orbital electron populations 1.22246 0.96845 1.01568 1.02195 1.21454 0.93297 0.83950 1.03206 1.47906 1.64571 1.13351 1.06893 1.19616 0.97281 0.93290 0.80029 1.21346 0.95358 1.32786 1.07008 0.90695 1.24850 0.94958 0.95811 0.97381 1.69896 1.15111 1.45093 1.23550 0.86867 0.81466 0.81672 0.79761 1.19979 1.21108 1.19118 1.19874 0.78679 0.87039 0.84453 1.90708 1.44293 1.17994 1.86821 1.20766 1.03644 0.98293 0.90992 1.20855 0.89294 0.94129 0.93842 1.21940 1.00912 1.00036 0.95005 1.21423 0.94775 0.94909 0.98350 1.22124 0.97071 0.99240 0.94249 1.98366 1.92905 1.63205 1.49084 1.22854 0.99260 0.93743 0.87693 1.67709 1.19307 1.06782 1.20301 0.92229 0.91951 0.93032 0.89685 0.91368 0.95343 0.94746 0.92621 0.87058 0.87739 0.83935 0.83936 0.81925 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.98 10.24 37.16 0.38 -1.60 16 2 C 0.11 1.55 5.93 -4.04 -0.02 1.53 16 3 N -0.59 -11.99 2.46 -175.06 -0.43 -12.42 16 4 C 0.22 5.35 4.23 -5.20 -0.02 5.33 16 5 C -0.53 -15.28 9.94 -34.44 -0.34 -15.62 16 6 H 0.07 2.39 8.06 -52.48 -0.42 1.97 16 7 C 0.07 2.13 5.47 -17.82 -0.10 2.03 16 8 N -0.90 -28.03 13.96 55.43 0.77 -27.26 16 9 Si 0.88 21.82 27.47 -169.99 -4.67 17.15 16 10 H -0.27 -6.92 7.11 56.52 0.40 -6.51 16 11 H -0.29 -6.96 7.11 56.52 0.40 -6.56 16 12 H -0.27 -6.22 6.54 56.52 0.37 -5.85 16 13 C 0.51 10.37 7.60 -10.99 -0.08 10.29 16 14 O -0.52 -13.08 14.91 5.55 0.08 -13.00 16 15 C -0.10 -1.35 4.65 -29.04 -0.14 -1.49 16 16 C 0.16 2.32 5.76 -82.59 -0.48 1.84 16 17 C -0.16 -1.77 9.71 -39.44 -0.38 -2.15 16 18 C -0.07 -0.72 9.98 -39.24 -0.39 -1.11 16 19 C -0.10 -1.18 6.34 -39.36 -0.25 -1.43 16 20 Cl -0.06 -0.67 28.99 -51.86 -1.50 -2.18 16 21 C 0.12 1.77 10.99 -17.51 -0.19 1.58 16 22 N -0.43 -7.47 9.22 -9.45 -0.09 -7.55 16 23 H 0.06 0.77 8.14 -51.93 -0.42 0.35 16 24 H 0.06 0.57 8.14 -51.93 -0.42 0.14 16 25 H 0.05 0.54 7.22 -51.93 -0.38 0.17 16 26 H 0.08 1.34 8.07 -51.93 -0.42 0.92 16 27 H 0.07 0.82 6.44 -51.93 -0.33 0.49 16 28 H 0.03 0.66 7.13 -51.93 -0.37 0.29 16 29 H 0.03 0.91 6.85 -51.93 -0.36 0.55 16 30 H 0.26 7.69 8.31 -40.82 -0.34 7.36 16 31 H 0.11 1.40 7.40 -51.93 -0.38 1.02 16 32 H 0.10 1.05 6.92 -51.93 -0.36 0.70 16 33 H 0.14 1.10 7.95 -52.49 -0.42 0.68 16 34 H 0.14 1.09 8.06 -52.49 -0.42 0.67 16 35 H 0.16 2.06 8.06 -52.48 -0.42 1.64 16 LS Contribution 315.36 15.07 4.75 4.75 Total: -1.00 -35.91 315.36 -7.39 -43.31 By element: Atomic # 1 Polarization: 2.31 SS G_CDS: -4.30 Total: -1.98 kcal Atomic # 6 Polarization: 1.20 SS G_CDS: -2.02 Total: -0.82 kcal Atomic # 7 Polarization: -47.49 SS G_CDS: 0.26 Total: -47.23 kcal Atomic # 8 Polarization: -13.08 SS G_CDS: 0.08 Total: -13.00 kcal Atomic # 14 Polarization: 21.82 SS G_CDS: -4.67 Total: 17.15 kcal Atomic # 17 Polarization: -0.67 SS G_CDS: -1.50 Total: -2.18 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -35.91 -7.39 -43.31 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000339814310.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.483 kcal (2) G-P(sol) polarization free energy of solvation -35.913 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.570 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.394 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.306 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.823 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds