Wall clock time and date at job start Tue Mar 31 2020 06:25:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 C 1.46890 * 110.99932 * 2 1 4 4 C 1.46904 * 110.99835 * 123.95249 * 2 1 3 5 5 H 1.08992 * 109.47214 * 296.61090 * 4 2 1 6 6 C 1.50701 * 109.46956 * 176.60756 * 4 2 1 7 7 O 1.21297 * 119.99972 * 333.01521 * 6 4 2 8 8 N 1.34780 * 119.99865 * 153.00780 * 6 4 2 9 9 C 1.37092 * 119.99731 * 180.02562 * 8 6 4 10 10 H 1.08001 * 120.00463 * 0.02562 * 9 8 6 11 11 C 1.38951 * 119.99997 * 180.02562 * 9 8 6 12 12 N 1.31412 * 119.99772 * 359.97438 * 11 9 8 13 13 Si 1.86797 * 120.00276 * 179.97438 * 11 9 8 14 14 H 1.48498 * 109.47222 * 59.99847 * 13 11 9 15 15 H 1.48498 * 109.47260 * 179.97438 * 13 11 9 16 16 H 1.48500 * 109.47036 * 299.99970 * 13 11 9 17 17 C 1.50705 * 109.47165 * 56.61086 * 4 2 1 18 18 C 1.38259 * 119.99286 * 226.71329 * 17 4 2 19 19 C 1.38216 * 120.02509 * 179.97438 * 18 17 4 20 20 C 1.38232 * 120.01640 * 0.02562 * 19 18 17 21 21 C 1.38339 * 119.98528 * 0.02562 * 20 19 18 22 22 Cl 1.73603 * 120.01318 * 180.02562 * 21 20 19 23 23 C 1.38194 * 119.98981 * 46.73533 * 17 4 2 24 24 H 1.09000 * 109.46810 * 296.04066 * 1 2 3 25 25 H 1.08995 * 109.46928 * 56.04988 * 1 2 3 26 26 H 1.09000 * 109.46827 * 176.05196 * 1 2 3 27 27 H 1.09005 * 109.47297 * 181.75015 * 3 2 1 28 28 H 1.08997 * 109.47189 * 301.74702 * 3 2 1 29 29 H 1.09007 * 109.47417 * 61.74909 * 3 2 1 30 30 H 0.96995 * 119.99683 * 0.02562 * 8 6 4 31 31 H 0.97007 * 119.99979 * 179.97438 * 12 11 9 32 32 H 1.07996 * 119.98498 * 359.72125 * 18 17 4 33 33 H 1.08003 * 119.99415 * 179.97438 * 19 18 17 34 34 H 1.07997 * 120.01078 * 179.97438 * 20 19 18 35 35 H 1.07995 * 120.01335 * 0.02562 * 23 17 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3713 0.0000 4 6 1.9955 -0.7660 1.1376 5 1 1.6959 -0.2855 2.0689 6 6 3.4996 -0.8138 1.0581 7 8 4.0531 -0.7261 -0.0177 8 7 4.2298 -0.9537 2.1823 9 6 5.5981 -0.9967 2.1099 10 1 6.0910 -0.9179 1.1522 11 6 6.3509 -1.1415 3.2688 12 7 5.7512 -1.2368 4.4342 13 14 8.2154 -1.2007 3.1702 14 1 8.7197 0.0605 2.5702 15 1 8.7785 -1.3587 4.5352 16 1 8.6302 -2.3506 2.3270 17 6 1.4455 -2.1685 1.0965 18 6 0.9318 -2.7434 2.2442 19 6 0.4267 -4.0294 2.2071 20 6 0.4354 -4.7418 1.0226 21 6 0.9502 -4.1676 -0.1259 22 17 0.9608 -5.0614 -1.6141 23 6 1.4552 -2.8798 -0.0883 24 1 -0.3633 0.4512 0.9234 25 1 -0.3633 0.5739 -0.8524 26 1 -0.3633 -1.0252 -0.0708 27 1 3.0847 1.3425 -0.0314 28 1 1.6208 1.9043 -0.8739 29 1 1.6715 1.8849 0.9053 30 1 3.7871 -1.0241 3.0424 31 1 6.2767 -1.3383 5.2433 32 1 0.9289 -2.1888 3.1709 33 1 0.0259 -4.4781 3.1041 34 1 0.0411 -5.7469 0.9938 35 1 1.8571 -2.4310 -0.9845 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000339924695.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:25:33 Heat of formation + Delta-G solvation = -8.417529 kcal Electronic energy + Delta-G solvation = -20080.410858 eV Core-core repulsion = 16911.421613 eV Total energy + Delta-G solvation = -3168.989246 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -39.86904 -38.12813 -36.42875 -36.02971 -33.88985 -31.79386 -31.06164 -30.52895 -27.67132 -26.93924 -24.78650 -22.76898 -22.18544 -21.31202 -19.06169 -17.91059 -16.92684 -16.30516 -15.52968 -15.48520 -14.78436 -14.53101 -14.35808 -13.90776 -13.63888 -13.47586 -13.25167 -13.12368 -12.42476 -12.04702 -12.03439 -11.80092 -11.51475 -11.39408 -11.22151 -11.20078 -11.16699 -10.98521 -10.57114 -10.46192 -10.24552 -9.50814 -8.95186 -8.58270 -8.23358 -8.00143 -7.92867 -6.45213 -3.85665 1.30071 1.46478 2.29402 3.17888 3.24360 3.28692 3.67512 3.90723 4.00465 4.25843 4.84136 4.99794 5.06319 5.20155 5.30030 5.36692 5.44210 5.51323 5.57508 5.69266 5.78950 5.83318 5.93005 6.02619 6.10327 6.21852 6.41029 6.43707 6.46148 6.69115 6.95373 7.23605 7.33851 7.51946 8.01807 8.57055 9.14006 9.49192 10.00708 10.72141 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.015434 B = 0.005652 C = 0.004965 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1813.745675 B = 4952.518109 C = 5637.830169 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 N -0.517 5.517 3 C 0.025 3.975 4 C 0.114 3.886 5 H 0.057 0.943 6 C 0.449 3.551 7 O -0.570 6.570 8 N -0.557 5.557 9 C -0.299 4.299 10 H 0.104 0.896 11 C 0.025 3.975 12 N -0.899 5.899 13 Si 0.930 3.070 14 H -0.273 1.273 15 H -0.284 1.284 16 H -0.273 1.273 17 C -0.054 4.054 18 C -0.107 4.107 19 C -0.111 4.111 20 C -0.116 4.116 21 C -0.039 4.039 22 Cl -0.079 7.079 23 C -0.070 4.070 24 H 0.022 0.978 25 H 0.067 0.933 26 H 0.068 0.932 27 H 0.086 0.914 28 H 0.065 0.935 29 H 0.019 0.981 30 H 0.391 0.609 31 H 0.273 0.727 32 H 0.128 0.872 33 H 0.130 0.870 34 H 0.128 0.872 35 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.961 -2.584 -3.079 13.570 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 N -0.241 5.241 3 C -0.123 4.123 4 C 0.002 3.998 5 H 0.075 0.925 6 C 0.234 3.766 7 O -0.453 6.453 8 N -0.192 5.192 9 C -0.429 4.429 10 H 0.121 0.879 11 C -0.177 4.177 12 N -0.540 5.540 13 Si 0.757 3.243 14 H -0.198 1.198 15 H -0.209 1.209 16 H -0.198 1.198 17 C -0.055 4.055 18 C -0.126 4.126 19 C -0.129 4.129 20 C -0.135 4.135 21 C -0.066 4.066 22 Cl -0.050 7.050 23 C -0.089 4.089 24 H 0.040 0.960 25 H 0.086 0.914 26 H 0.086 0.914 27 H 0.104 0.896 28 H 0.084 0.916 29 H 0.038 0.962 30 H 0.224 0.776 31 H 0.082 0.918 32 H 0.146 0.854 33 H 0.148 0.852 34 H 0.146 0.854 35 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -12.319 -2.835 -4.176 13.313 hybrid contribution 0.397 0.183 1.286 1.358 sum -11.922 -2.653 -2.890 12.551 Atomic orbital electron populations 1.22436 0.87692 1.02217 1.00125 1.61655 1.06703 1.14108 1.41629 1.22432 1.02871 0.87477 0.99521 1.20470 0.95369 0.90929 0.92984 0.92549 1.19363 0.86690 0.85197 0.85385 1.90535 1.71664 1.54991 1.28115 1.41863 1.06970 1.63070 1.07346 1.19661 0.80851 1.47151 0.95223 0.87858 1.25260 1.00750 0.97101 0.94626 1.69603 1.36794 1.49587 0.98055 0.85924 0.82047 0.79128 0.77196 1.19841 1.20931 1.19828 1.19475 0.97682 0.95251 0.93117 1.21170 0.97814 0.95727 0.97904 1.20971 1.00271 0.94330 0.97331 1.20987 1.00666 1.00289 0.91511 1.20907 1.04337 0.93697 0.87621 1.98348 1.97414 1.75153 1.34129 1.21015 0.96789 0.91547 0.99578 0.95968 0.91390 0.91360 0.89580 0.91601 0.96247 0.77570 0.91756 0.85410 0.85204 0.85376 0.83736 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.31 9.20 60.07 0.55 0.87 16 2 N -0.52 -8.75 4.14 -246.00 -1.02 -9.76 16 3 C 0.02 0.40 9.23 60.06 0.55 0.96 16 4 C 0.11 2.10 2.07 -70.01 -0.14 1.95 16 5 H 0.06 0.96 7.94 -51.93 -0.41 0.55 16 6 C 0.45 10.52 5.84 -10.98 -0.06 10.46 16 7 O -0.57 -15.23 15.04 5.54 0.08 -15.14 16 8 N -0.56 -13.97 5.29 -10.96 -0.06 -14.03 16 9 C -0.30 -8.25 9.68 -14.94 -0.14 -8.39 16 10 H 0.10 2.98 7.16 -52.49 -0.38 2.61 16 11 C 0.02 0.65 5.50 -17.47 -0.10 0.56 16 12 N -0.90 -24.11 13.05 55.50 0.72 -23.39 16 13 Si 0.93 20.91 29.55 -169.99 -5.02 15.89 16 14 H -0.27 -6.08 7.11 56.52 0.40 -5.68 16 15 H -0.28 -6.22 7.11 56.52 0.40 -5.82 16 16 H -0.27 -6.14 7.11 56.52 0.40 -5.74 16 17 C -0.05 -0.91 3.56 -104.63 -0.37 -1.28 16 18 C -0.11 -1.56 9.67 -39.58 -0.38 -1.95 16 19 C -0.11 -1.42 10.04 -39.59 -0.40 -1.81 16 20 C -0.12 -1.53 9.83 -39.55 -0.39 -1.92 16 21 C -0.04 -0.59 6.32 -39.49 -0.25 -0.84 16 22 Cl -0.08 -1.11 28.96 -51.86 -1.50 -2.61 16 23 C -0.07 -1.20 8.27 -39.55 -0.33 -1.53 16 24 H 0.02 0.27 8.14 -51.93 -0.42 -0.15 16 25 H 0.07 0.80 8.14 -51.93 -0.42 0.37 16 26 H 0.07 0.91 6.46 -51.93 -0.34 0.57 16 27 H 0.09 1.69 6.26 -51.93 -0.33 1.36 16 28 H 0.07 0.92 8.14 -51.93 -0.42 0.49 16 29 H 0.02 0.29 8.14 -51.93 -0.42 -0.14 16 30 H 0.39 9.45 7.90 -40.82 -0.32 9.13 16 31 H 0.27 6.94 8.31 -40.82 -0.34 6.60 16 32 H 0.13 1.66 7.99 -52.49 -0.42 1.24 16 33 H 0.13 1.28 8.06 -52.48 -0.42 0.86 16 34 H 0.13 1.39 8.06 -52.49 -0.42 0.97 16 35 H 0.14 2.72 7.93 -52.49 -0.42 2.30 16 LS Contribution 315.18 15.07 4.75 4.75 Total: -1.00 -29.92 315.18 -7.78 -37.70 By element: Atomic # 1 Polarization: 13.80 SS G_CDS: -4.28 Total: 9.53 kcal Atomic # 6 Polarization: -1.47 SS G_CDS: -1.46 Total: -2.93 kcal Atomic # 7 Polarization: -46.83 SS G_CDS: -0.35 Total: -47.18 kcal Atomic # 8 Polarization: -15.23 SS G_CDS: 0.08 Total: -15.14 kcal Atomic # 14 Polarization: 20.91 SS G_CDS: -5.02 Total: 15.89 kcal Atomic # 17 Polarization: -1.11 SS G_CDS: -1.50 Total: -2.61 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -29.92 -7.78 -37.70 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000339924695.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.287 kcal (2) G-P(sol) polarization free energy of solvation -29.921 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.634 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.783 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.704 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.418 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds