Wall clock time and date at job start Tue Mar 31 2020 06:12:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.39772 * 119.99886 * 2 1 4 4 C 1.39046 * 119.98763 * 359.97438 * 3 2 1 5 5 C 1.38157 * 120.24596 * 180.02562 * 4 3 2 6 6 C 1.38180 * 120.21216 * 359.97438 * 5 4 3 7 7 Cl 1.73603 * 120.01845 * 179.97438 * 6 5 4 8 8 C 1.39695 * 119.96938 * 359.97438 * 6 5 4 9 9 C 1.47784 * 120.12269 * 180.02562 * 8 6 5 10 10 O 1.21562 * 119.99960 * 0.02562 * 9 8 6 11 11 N 1.34776 * 120.00245 * 179.97438 * 9 8 6 12 12 C 1.46490 * 120.00268 * 180.02562 * 11 9 8 13 13 H 1.09003 * 109.46993 * 35.00779 * 12 11 9 14 14 C 1.52998 * 109.47380 * 275.00307 * 12 11 9 15 15 C 1.50703 * 109.47446 * 155.00125 * 12 11 9 16 16 H 1.08005 * 119.99551 * 35.00526 * 15 12 11 17 17 C 1.37868 * 120.00466 * 215.00504 * 15 12 11 18 18 N 1.31512 * 120.00194 * 184.91737 * 17 15 12 19 19 Si 1.86802 * 120.00167 * 4.91686 * 17 15 12 20 20 H 1.48496 * 109.47292 * 84.83080 * 19 17 15 21 21 H 1.48494 * 109.47356 * 204.83526 * 19 17 15 22 22 H 1.48500 * 109.46883 * 324.83313 * 19 17 15 23 23 C 1.38578 * 119.98583 * 180.23911 * 3 2 1 24 24 H 1.09004 * 109.47085 * 60.00273 * 1 2 3 25 25 H 1.08998 * 109.47100 * 180.02562 * 1 2 3 26 26 H 1.08998 * 109.47344 * 300.00063 * 1 2 3 27 27 H 0.96996 * 119.99800 * 180.02562 * 2 1 3 28 28 H 1.08008 * 119.87831 * 359.97438 * 4 3 2 29 29 H 1.07998 * 119.89365 * 179.97438 * 5 4 3 30 30 H 0.97006 * 119.99628 * 0.02562 * 11 9 8 31 31 H 1.09007 * 109.46978 * 55.04113 * 14 12 11 32 32 H 1.08995 * 109.47334 * 295.03354 * 14 12 11 33 33 H 1.09001 * 109.47232 * 175.03013 * 14 12 11 34 34 H 0.97002 * 119.99993 * 180.02562 * 18 17 15 35 35 H 1.07998 * 120.10533 * 0.02902 * 23 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1639 1.2105 0.0000 4 6 1.4684 2.4145 -0.0005 5 6 2.1537 3.6141 -0.0011 6 6 3.5355 3.6254 -0.0005 7 17 4.3916 5.1357 -0.0019 8 6 4.2432 2.4211 0.0011 9 6 5.7211 2.4293 0.0022 10 8 6.3230 3.4854 0.0022 11 7 6.4015 1.2659 0.0043 12 6 7.8663 1.2740 0.0060 13 1 8.2243 2.1184 0.5951 14 6 8.3774 1.4010 -1.4305 15 6 8.3752 -0.0102 0.6085 16 1 7.8382 -0.9330 0.4456 17 6 9.5262 -0.0072 1.3674 18 7 10.0236 -1.1404 1.8123 19 14 10.3792 1.6067 1.7640 20 1 9.7520 2.2164 2.9640 21 1 11.8177 1.3535 2.0320 22 1 10.2461 2.5332 0.6111 23 6 3.5496 1.2102 -0.0050 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0276 0.0005 26 1 -0.3634 0.5138 0.8899 27 1 1.9500 -0.8400 -0.0004 28 1 0.3883 2.4119 -0.0014 29 1 1.6078 4.5459 -0.0019 30 1 5.9211 0.4231 0.0047 31 1 7.9389 2.2842 -1.8954 32 1 8.0941 0.5138 -1.9967 33 1 9.4632 1.4959 -1.4228 34 1 10.8331 -1.1382 2.3466 35 1 4.0911 0.2757 -0.0094 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000342552148.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:12:35 Heat of formation + Delta-G solvation = -9.999258 kcal Electronic energy + Delta-G solvation = -19554.320758 eV Core-core repulsion = 16385.262924 eV Total energy + Delta-G solvation = -3169.057834 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -39.96299 -38.38384 -36.35146 -35.10822 -34.77928 -32.47856 -31.45920 -29.74408 -29.20534 -26.03448 -25.29091 -23.67694 -22.37002 -20.58966 -19.53608 -18.21291 -17.07329 -16.68241 -15.99232 -15.53409 -15.12748 -14.67406 -14.36172 -14.14493 -14.01217 -13.84922 -13.07189 -12.84603 -12.54085 -12.48445 -12.32434 -12.09319 -11.53918 -11.51871 -11.40588 -11.09636 -10.84500 -10.69474 -10.43785 -9.85168 -9.83321 -9.18515 -9.04342 -8.87587 -8.67823 -8.03174 -7.49979 -6.22424 -4.26075 0.93766 1.34422 2.54127 3.23086 3.26081 3.30098 3.36759 3.44910 3.96218 4.08412 4.34820 4.69758 4.82858 4.85599 5.15190 5.16225 5.26365 5.36374 5.39495 5.45429 5.77746 5.89128 6.08522 6.26519 6.38339 6.46362 6.57053 6.71408 6.97719 7.07146 7.22233 7.40613 7.45831 7.57697 8.15299 8.58328 8.77638 9.00325 9.40077 10.89229 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.018125 B = 0.005250 C = 0.004323 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1544.416056 B = 5332.197345 C = 6475.216948 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.093 3.907 2 N -0.752 5.752 3 C 0.207 3.793 4 C -0.171 4.171 5 C -0.075 4.075 6 C -0.045 4.045 7 Cl -0.044 7.044 8 C -0.068 4.068 9 C 0.536 3.464 10 O -0.530 6.530 11 N -0.697 5.697 12 C 0.232 3.768 13 H 0.052 0.948 14 C -0.147 4.147 15 C -0.530 4.530 16 H 0.078 0.922 17 C 0.082 3.918 18 N -0.890 5.890 19 Si 0.874 3.126 20 H -0.272 1.272 21 H -0.286 1.286 22 H -0.259 1.259 23 C -0.152 4.152 24 H 0.052 0.948 25 H 0.073 0.927 26 H 0.052 0.948 27 H 0.404 0.596 28 H 0.130 0.870 29 H 0.134 0.866 30 H 0.390 0.610 31 H 0.030 0.970 32 H 0.046 0.954 33 H 0.052 0.948 34 H 0.268 0.732 35 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.810 3.954 -4.069 20.606 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.052 4.052 2 N -0.383 5.383 3 C 0.104 3.896 4 C -0.194 4.194 5 C -0.094 4.094 6 C -0.075 4.075 7 Cl -0.015 7.015 8 C -0.073 4.073 9 C 0.320 3.680 10 O -0.408 6.408 11 N -0.346 5.346 12 C 0.129 3.871 13 H 0.070 0.930 14 C -0.206 4.206 15 C -0.568 4.568 16 H 0.096 0.904 17 C -0.122 4.122 18 N -0.526 5.526 19 Si 0.700 3.300 20 H -0.198 1.198 21 H -0.212 1.212 22 H -0.184 1.184 23 C -0.175 4.175 24 H 0.070 0.930 25 H 0.092 0.908 26 H 0.070 0.930 27 H 0.238 0.762 28 H 0.147 0.853 29 H 0.152 0.848 30 H 0.225 0.775 31 H 0.049 0.951 32 H 0.065 0.935 33 H 0.071 0.929 34 H 0.077 0.923 35 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -19.309 4.757 -3.958 20.276 hybrid contribution 0.442 -0.020 0.325 0.549 sum -18.867 4.737 -3.633 19.789 Atomic orbital electron populations 1.21533 0.80163 1.02459 1.01017 1.44443 1.05678 1.05246 1.82883 1.17709 0.90768 0.86616 0.94458 1.20645 0.99721 0.90427 1.08583 1.20740 0.91591 0.98419 0.98699 1.20729 0.91937 0.87580 1.07232 1.98384 1.77386 1.29149 1.96610 1.19854 0.94679 0.91908 1.00876 1.18191 0.86103 0.85235 0.78444 1.90812 1.69718 1.30359 1.49925 1.46591 1.09312 1.06826 1.71876 1.19144 0.75698 0.98437 0.93780 0.93046 1.22211 1.00520 0.99143 0.98726 1.20995 1.10176 0.93222 1.32370 0.90408 1.24924 0.96573 0.96394 0.94355 1.69880 1.21750 1.25765 1.35205 0.86897 0.78649 0.84320 0.80104 1.19796 1.21227 1.18374 1.20775 0.92089 0.97702 1.06931 0.92981 0.90795 0.92961 0.76169 0.85260 0.84796 0.77521 0.95073 0.93482 0.92909 0.92256 0.84696 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.55 9.94 59.85 0.59 1.14 16 2 N -0.75 -6.44 5.89 -65.42 -0.39 -6.83 16 3 C 0.21 2.36 6.65 -83.81 -0.56 1.81 16 4 C -0.17 -1.82 9.30 -39.31 -0.37 -2.19 16 5 C -0.08 -0.91 9.81 -39.63 -0.39 -1.29 16 6 C -0.05 -0.70 6.35 -39.06 -0.25 -0.95 16 7 Cl -0.04 -0.75 26.00 -51.86 -1.35 -2.10 16 8 C -0.07 -1.14 5.87 -104.96 -0.62 -1.76 16 9 C 0.54 10.98 7.73 -12.36 -0.10 10.89 16 10 O -0.53 -12.43 13.62 5.31 0.07 -12.36 16 11 N -0.70 -14.45 5.02 -55.90 -0.28 -14.73 16 12 C 0.23 5.59 2.22 -69.09 -0.15 5.44 16 13 H 0.05 1.36 4.73 -51.93 -0.25 1.11 16 14 C -0.15 -3.28 9.47 37.16 0.35 -2.93 16 15 C -0.53 -14.25 9.05 -34.44 -0.31 -14.56 16 16 H 0.08 2.19 8.06 -52.48 -0.42 1.76 16 17 C 0.08 2.30 5.47 -17.82 -0.10 2.20 16 18 N -0.89 -26.19 13.96 55.43 0.77 -25.42 16 19 Si 0.87 21.82 26.99 -169.99 -4.59 17.23 16 20 H -0.27 -6.85 7.11 56.52 0.40 -6.45 16 21 H -0.29 -6.99 7.11 56.52 0.40 -6.59 16 22 H -0.26 -6.40 6.82 56.52 0.39 -6.01 16 23 C -0.15 -2.06 9.38 -38.97 -0.37 -2.42 16 24 H 0.05 0.29 7.94 -51.93 -0.41 -0.12 16 25 H 0.07 0.30 8.14 -51.93 -0.42 -0.12 16 26 H 0.05 0.30 7.95 -51.93 -0.41 -0.11 16 27 H 0.40 2.99 8.84 -40.82 -0.36 2.63 16 28 H 0.13 1.03 6.71 -52.48 -0.35 0.68 16 29 H 0.13 1.29 8.06 -52.49 -0.42 0.87 16 30 H 0.39 7.09 6.62 -40.82 -0.27 6.82 16 31 H 0.03 0.66 8.14 -51.92 -0.42 0.24 16 32 H 0.05 0.98 8.14 -51.93 -0.42 0.56 16 33 H 0.05 1.18 8.14 -51.93 -0.42 0.76 16 34 H 0.27 7.42 8.31 -40.82 -0.34 7.08 16 35 H 0.14 1.66 6.40 -52.49 -0.34 1.32 16 LS Contribution 309.94 15.07 4.67 4.67 Total: -1.00 -32.32 309.94 -7.42 -39.74 By element: Atomic # 1 Polarization: 8.51 SS G_CDS: -4.08 Total: 4.43 kcal Atomic # 6 Polarization: -2.38 SS G_CDS: -2.25 Total: -4.63 kcal Atomic # 7 Polarization: -47.09 SS G_CDS: 0.11 Total: -46.98 kcal Atomic # 8 Polarization: -12.43 SS G_CDS: 0.07 Total: -12.36 kcal Atomic # 14 Polarization: 21.82 SS G_CDS: -4.59 Total: 17.23 kcal Atomic # 17 Polarization: -0.75 SS G_CDS: -1.35 Total: -2.10 kcal Total LS contribution 4.67 Total: 4.67 kcal Total: -32.32 -7.42 -39.74 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000342552148.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.739 kcal (2) G-P(sol) polarization free energy of solvation -32.321 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.582 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.417 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.738 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.999 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds