Wall clock time and date at job start Tue Mar 31 2020 06:24:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.46495 * 120.00068 * 2 1 4 4 C 1.50699 * 109.47098 * 277.30128 * 3 2 1 5 5 C 1.38237 * 120.00619 * 95.16771 * 4 3 2 6 6 C 1.38222 * 120.01518 * 179.74464 * 5 4 3 7 7 C 1.38262 * 120.02467 * 0.25208 * 6 5 4 8 8 C 1.38187 * 120.01169 * 0.02855 * 7 6 5 9 9 C 1.38333 * 120.01180 * 275.44122 * 4 3 2 10 10 Cl 1.73599 * 120.00992 * 0.02562 * 9 4 3 11 11 C 1.34780 * 120.00010 * 179.97438 * 2 1 3 12 12 O 1.21586 * 120.00258 * 185.79840 * 11 2 1 13 13 N 1.34778 * 119.99949 * 5.80043 * 11 2 1 14 14 C 1.46503 * 119.99831 * 180.02562 * 13 11 2 15 15 C 1.50702 * 109.46911 * 179.97438 * 14 13 11 16 16 H 1.08004 * 120.00246 * 0.02562 * 15 14 13 17 17 C 1.37878 * 119.99914 * 179.97438 * 15 14 13 18 18 N 1.31508 * 119.99954 * 359.97438 * 17 15 14 19 19 Si 1.86800 * 119.99800 * 180.02562 * 17 15 14 20 20 H 1.48507 * 109.47326 * 90.00153 * 19 17 15 21 21 H 1.48505 * 109.46838 * 210.00072 * 19 17 15 22 22 H 1.48499 * 109.47397 * 330.00065 * 19 17 15 23 23 H 1.08995 * 109.47141 * 90.00259 * 1 2 3 24 24 H 1.09000 * 109.47183 * 209.99559 * 1 2 3 25 25 H 1.08995 * 109.47081 * 329.99921 * 1 2 3 26 26 H 1.09001 * 109.46986 * 157.30603 * 3 2 1 27 27 H 1.09000 * 109.46812 * 37.30362 * 3 2 1 28 28 H 1.08005 * 119.98896 * 0.02592 * 5 4 3 29 29 H 1.08003 * 119.98593 * 180.23582 * 6 5 4 30 30 H 1.07994 * 119.99212 * 180.02562 * 7 6 5 31 31 H 1.08008 * 120.00580 * 179.97438 * 8 7 6 32 32 H 0.97001 * 120.00145 * 359.97438 * 13 11 2 33 33 H 1.09003 * 109.46913 * 299.99003 * 14 13 11 34 34 H 1.08991 * 109.47436 * 59.99573 * 14 13 11 35 35 H 0.97005 * 119.99829 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.2923 1.7940 -1.4093 5 6 1.3664 2.7120 -1.8686 6 6 1.4563 3.1979 -3.1595 7 6 2.4691 2.7622 -3.9938 8 6 3.3918 1.8402 -3.5376 9 6 3.3024 1.3534 -2.2454 10 17 4.4609 0.1947 -1.6719 11 6 2.1389 -1.1672 0.0005 12 8 3.3501 -1.1699 0.1069 13 7 1.4702 -2.3315 -0.1169 14 6 2.2027 -3.6003 -0.1158 15 6 1.2296 -4.7422 -0.2584 16 1 0.1714 -4.5427 -0.3419 17 6 1.6903 -6.0415 -0.2832 18 7 2.9789 -6.2842 -0.1830 19 14 0.4842 -7.4568 -0.4606 20 1 0.2872 -7.7618 -1.9006 21 1 1.0231 -8.6559 0.2301 22 1 -0.8165 -7.0780 0.1475 23 1 -0.3633 0.0000 -1.0276 24 1 -0.3633 -0.8900 0.5138 25 1 -0.3633 0.8899 0.5138 26 1 3.2002 1.1092 0.3965 27 1 1.6712 1.9920 0.6228 28 1 0.5754 3.0530 -1.2172 29 1 0.7349 3.9180 -3.5166 30 1 2.5391 3.1425 -5.0021 31 1 4.1827 1.4996 -4.1895 32 1 0.5039 -2.3294 -0.2014 33 1 2.9052 -3.6150 -0.9491 34 1 2.7488 -3.7037 0.8217 35 1 3.3030 -7.1983 -0.2008 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000426410799.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:24:31 Heat of formation + Delta-G solvation = 1.081920 kcal Electronic energy + Delta-G solvation = -19745.901973 eV Core-core repulsion = 16577.324655 eV Total energy + Delta-G solvation = -3168.577318 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -39.84205 -38.80198 -35.97602 -35.22654 -34.09049 -32.45820 -31.45361 -30.69037 -27.48858 -27.00009 -25.15356 -22.69503 -22.50460 -21.35009 -19.22736 -17.87508 -17.02008 -16.04314 -15.84898 -15.73638 -15.32069 -14.80164 -14.54372 -13.83727 -13.57651 -13.38453 -13.16090 -12.96539 -12.81195 -12.34440 -11.98837 -11.77722 -11.69799 -11.57503 -11.19484 -11.11662 -10.90558 -10.85461 -10.31104 -10.17273 -9.31302 -9.20238 -8.91614 -8.68221 -8.61726 -8.22675 -7.63520 -6.10836 -4.16863 1.12346 1.19742 2.54538 3.23985 3.27320 3.33608 3.36246 3.73531 4.03762 4.35730 4.67536 4.71812 4.87262 4.91466 5.14925 5.25244 5.26706 5.31544 5.45139 5.57206 5.65420 5.80082 5.82220 5.94831 6.18939 6.30756 6.35593 6.73794 6.83052 7.20236 7.58781 7.62906 7.65338 7.93033 8.08352 8.82552 9.00018 9.41411 9.56584 10.99425 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.024280 B = 0.004388 C = 0.004203 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1152.927200 B = 6379.125308 C = 6660.717892 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.637 5.637 3 C 0.169 3.831 4 C -0.098 4.098 5 C -0.098 4.098 6 C -0.127 4.127 7 C -0.110 4.110 8 C -0.119 4.119 9 C -0.027 4.027 10 Cl -0.019 7.019 11 C 0.692 3.308 12 O -0.579 6.579 13 N -0.730 5.730 14 C 0.269 3.731 15 C -0.540 4.540 16 H 0.061 0.939 17 C 0.064 3.936 18 N -0.886 5.886 19 Si 0.902 3.098 20 H -0.279 1.279 21 H -0.285 1.285 22 H -0.273 1.273 23 H 0.047 0.953 24 H 0.069 0.931 25 H 0.065 0.935 26 H 0.103 0.897 27 H 0.078 0.922 28 H 0.127 0.873 29 H 0.124 0.876 30 H 0.126 0.874 31 H 0.130 0.870 32 H 0.384 0.616 33 H 0.023 0.977 34 H 0.023 0.977 35 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.780 19.812 -4.252 20.819 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 N -0.376 5.376 3 C 0.045 3.955 4 C -0.100 4.100 5 C -0.117 4.117 6 C -0.145 4.145 7 C -0.128 4.128 8 C -0.138 4.138 9 C -0.055 4.055 10 Cl 0.011 6.989 11 C 0.393 3.607 12 O -0.456 6.456 13 N -0.383 5.383 14 C 0.148 3.852 15 C -0.579 4.579 16 H 0.079 0.921 17 C -0.140 4.140 18 N -0.523 5.523 19 Si 0.730 3.270 20 H -0.205 1.205 21 H -0.210 1.210 22 H -0.198 1.198 23 H 0.066 0.934 24 H 0.088 0.912 25 H 0.084 0.916 26 H 0.121 0.879 27 H 0.096 0.904 28 H 0.145 0.855 29 H 0.142 0.858 30 H 0.144 0.856 31 H 0.148 0.852 32 H 0.218 0.782 33 H 0.041 0.959 34 H 0.041 0.959 35 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -3.614 19.457 -4.079 20.206 hybrid contribution -1.125 -0.895 -0.316 1.472 sum -4.739 18.562 -4.395 19.655 Atomic orbital electron populations 1.21618 0.80585 1.02567 1.01175 1.47003 1.05687 1.04615 1.80316 1.20137 0.99881 0.84410 0.91071 1.20325 0.94568 0.97364 0.97791 1.20993 0.97941 0.96706 0.96032 1.21150 0.98683 1.00536 0.94117 1.21090 0.94787 0.97150 0.99804 1.21126 1.00315 0.97999 0.94369 1.21223 0.94548 0.95139 0.94557 1.98515 1.57559 1.55130 1.87692 1.16086 0.85598 0.80334 0.78717 1.90886 1.11681 1.85799 1.57267 1.45828 1.10057 1.05891 1.76522 1.18926 0.91912 0.76953 0.97434 1.21234 0.93420 0.90946 1.52261 0.92120 1.24929 0.95336 0.98829 0.94870 1.69981 1.12731 1.20676 1.48925 0.86442 0.80887 0.81486 0.78226 1.20525 1.21042 1.19802 0.93420 0.91199 0.91612 0.87885 0.90386 0.85531 0.85798 0.85573 0.85245 0.78224 0.95857 0.95891 0.92543 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.00 10.09 59.85 0.60 1.61 16 2 N -0.64 -10.08 2.86 -188.75 -0.54 -10.63 16 3 C 0.17 2.33 5.36 -5.20 -0.03 2.30 16 4 C -0.10 -1.30 5.44 -104.59 -0.57 -1.87 16 5 C -0.10 -1.03 9.68 -39.59 -0.38 -1.41 16 6 C -0.13 -1.22 10.05 -39.58 -0.40 -1.61 16 7 C -0.11 -1.13 10.05 -39.59 -0.40 -1.52 16 8 C -0.12 -1.50 9.83 -39.55 -0.39 -1.89 16 9 C -0.03 -0.40 6.31 -39.50 -0.25 -0.65 16 10 Cl -0.02 -0.33 23.62 -51.86 -1.22 -1.56 16 11 C 0.69 14.48 8.01 -86.91 -0.70 13.78 16 12 O -0.58 -13.84 12.15 5.29 0.06 -13.78 16 13 N -0.73 -16.14 5.39 -66.41 -0.36 -16.50 16 14 C 0.27 7.33 5.43 -5.19 -0.03 7.31 16 15 C -0.54 -14.96 9.28 -34.44 -0.32 -15.28 16 16 H 0.06 1.58 7.60 -52.48 -0.40 1.18 16 17 C 0.06 1.80 5.46 -17.82 -0.10 1.70 16 18 N -0.89 -26.52 13.29 55.43 0.74 -25.78 16 19 Si 0.90 21.15 29.54 -169.99 -5.02 16.13 16 20 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 21 H -0.28 -6.64 7.11 56.52 0.40 -6.23 16 22 H -0.27 -6.21 7.11 56.52 0.40 -5.80 16 23 H 0.05 0.55 8.14 -51.93 -0.42 0.13 16 24 H 0.07 0.85 6.62 -51.93 -0.34 0.50 16 25 H 0.07 0.58 7.97 -51.93 -0.41 0.17 16 26 H 0.10 1.65 6.25 -51.93 -0.32 1.32 16 27 H 0.08 0.81 7.91 -51.93 -0.41 0.40 16 28 H 0.13 1.00 8.06 -52.48 -0.42 0.58 16 29 H 0.12 0.85 8.06 -52.48 -0.42 0.43 16 30 H 0.13 0.96 8.06 -52.49 -0.42 0.54 16 31 H 0.13 1.47 8.06 -52.48 -0.42 1.05 16 32 H 0.38 7.47 6.21 -40.82 -0.25 7.21 16 33 H 0.02 0.71 8.14 -51.93 -0.42 0.29 16 34 H 0.02 0.69 8.14 -51.93 -0.42 0.27 16 35 H 0.26 7.44 8.31 -40.82 -0.34 7.10 16 LS Contribution 310.65 15.07 4.68 4.68 Total: -1.00 -33.07 310.65 -8.85 -41.93 By element: Atomic # 1 Polarization: 7.29 SS G_CDS: -4.24 Total: 3.05 kcal Atomic # 6 Polarization: 5.40 SS G_CDS: -2.95 Total: 2.45 kcal Atomic # 7 Polarization: -52.75 SS G_CDS: -0.16 Total: -52.91 kcal Atomic # 8 Polarization: -13.84 SS G_CDS: 0.06 Total: -13.78 kcal Atomic # 14 Polarization: 21.15 SS G_CDS: -5.02 Total: 16.13 kcal Atomic # 17 Polarization: -0.33 SS G_CDS: -1.22 Total: -1.56 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -33.07 -8.85 -41.93 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000426410799.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.007 kcal (2) G-P(sol) polarization free energy of solvation -33.073 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.934 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.852 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.925 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.082 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds