Wall clock time and date at job start Tue Mar 31 2020 06:18:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 N 1.46509 * 109.46930 * 2 1 4 4 C 1.46497 * 119.99888 * 85.88287 * 3 2 1 5 5 C 1.50693 * 109.47372 * 89.99693 * 4 3 2 6 6 H 1.07999 * 120.00205 * 0.02562 * 5 4 3 7 7 C 1.37885 * 120.00186 * 179.97438 * 5 4 3 8 8 N 1.31520 * 119.99508 * 0.02562 * 7 5 4 9 9 Si 1.86799 * 119.99969 * 180.02562 * 7 5 4 10 10 H 1.48499 * 109.47238 * 60.00582 * 9 7 5 11 11 H 1.48502 * 109.46624 * 180.02562 * 9 7 5 12 12 H 1.48492 * 109.47349 * 300.00271 * 9 7 5 13 13 C 1.34775 * 119.99766 * 265.88084 * 3 2 1 14 14 O 1.21553 * 119.99580 * 184.59112 * 13 3 2 15 15 C 1.47840 * 120.00214 * 4.58943 * 13 3 2 16 16 C 1.39563 * 120.55225 * 301.03724 * 15 13 3 17 17 N 1.31667 * 120.59369 * 179.75044 * 16 15 13 18 18 C 1.31944 * 121.89432 * 0.54555 * 17 16 15 19 19 C 1.38437 * 121.06354 * 359.72096 * 18 17 16 20 20 Cl 1.73592 * 120.36285 * 180.02562 * 19 18 17 21 21 C 1.38512 * 119.27246 * 0.02562 * 19 18 17 22 22 C 1.50707 * 120.85900 * 180.02562 * 21 19 18 23 23 H 1.09001 * 109.46621 * 180.02562 * 1 2 3 24 24 H 1.09005 * 109.47023 * 299.99445 * 1 2 3 25 25 H 1.08996 * 109.47535 * 59.99706 * 1 2 3 26 26 H 1.08996 * 109.47230 * 240.00524 * 2 1 3 27 27 H 1.09001 * 109.47471 * 119.99828 * 2 1 3 28 28 H 1.09004 * 109.46886 * 210.00309 * 4 3 2 29 29 H 1.09004 * 109.46833 * 329.99740 * 4 3 2 30 30 H 0.96998 * 119.99596 * 179.97438 * 8 7 5 31 31 H 1.08002 * 119.70368 * 0.02562 * 16 15 13 32 32 H 1.07997 * 119.46955 * 179.74515 * 18 17 16 33 33 H 1.08997 * 109.47106 * 265.00929 * 22 21 19 34 34 H 1.09005 * 109.46920 * 25.01087 * 22 21 19 35 35 H 1.09002 * 109.47171 * 145.00845 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 6 2.1765 2.1023 1.2654 5 6 3.5668 1.8771 1.8014 6 1 4.2631 1.2592 1.2540 7 6 3.9503 2.4609 2.9903 8 7 3.1025 3.2139 3.6566 9 14 5.6740 2.1824 3.6543 10 1 6.6695 2.6816 2.6720 11 1 5.8342 2.9131 4.9371 12 1 5.8882 0.7307 3.8819 13 6 2.3219 1.9887 -1.1642 14 8 2.8054 3.1039 -1.1598 15 6 2.0670 1.2985 -2.4465 16 6 2.6660 0.0684 -2.7215 17 7 2.4357 -0.5493 -3.8612 18 6 1.6476 -0.0350 -4.7860 19 6 1.0199 1.1837 -4.5926 20 17 -0.0138 1.8432 -5.8214 21 6 1.2259 1.8710 -3.4078 22 6 0.5601 3.2000 -3.1593 23 1 -0.3632 -1.0277 0.0005 24 1 -0.3633 0.5138 0.8901 25 1 -0.3634 0.5138 -0.8899 26 1 1.8933 -0.5137 -0.8900 27 1 1.8934 -0.5138 0.8900 28 1 2.0195 3.1679 1.0985 29 1 1.4455 1.7358 1.9862 30 1 3.3722 3.6242 4.4931 31 1 3.3209 -0.3831 -1.9910 32 1 1.4892 -0.5735 -5.7087 33 1 1.2408 4.0049 -3.4369 34 1 -0.3479 3.2692 -3.7584 35 1 0.3059 3.2873 -2.1029 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000457481261.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:18:59 Heat of formation + Delta-G solvation = -8.501237 kcal Electronic energy + Delta-G solvation = -20079.629319 eV Core-core repulsion = 16910.636443 eV Total energy + Delta-G solvation = -3168.992875 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -40.78122 -38.65768 -36.83986 -35.50917 -33.88668 -32.88758 -31.33601 -30.16800 -28.26347 -27.08327 -24.59135 -23.34823 -22.55952 -22.12965 -19.05389 -17.36399 -16.86608 -16.54711 -16.40687 -15.79366 -15.10489 -14.65606 -14.31535 -13.97500 -13.50806 -13.46960 -13.02677 -12.94426 -12.81784 -12.33697 -12.17220 -12.05464 -11.94076 -11.66739 -11.33212 -11.28045 -10.96669 -10.76946 -10.60828 -10.21037 -9.98619 -9.71606 -9.53765 -9.15726 -8.94459 -8.47328 -7.80558 -6.09089 -4.14039 0.64775 0.91155 1.80639 3.10424 3.30114 3.34631 3.37909 3.51289 3.73900 4.24579 4.40983 4.42857 4.53794 4.67140 5.10611 5.20423 5.26509 5.29071 5.36730 5.55603 5.61539 5.64444 5.71217 5.93710 6.01287 6.09467 6.17489 6.29750 6.42572 6.95110 7.32274 7.41201 7.62943 7.86156 8.15843 8.23230 8.76029 8.92904 9.51091 10.99058 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.027857 B = 0.004508 C = 0.004433 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1004.909040 B = 6209.586416 C = 6315.325991 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C 0.096 3.904 3 N -0.585 5.585 4 C 0.248 3.752 5 C -0.528 4.528 6 H 0.058 0.942 7 C 0.063 3.937 8 N -0.894 5.894 9 Si 0.898 3.102 10 H -0.276 1.276 11 H -0.286 1.286 12 H -0.276 1.276 13 C 0.552 3.448 14 O -0.522 6.522 15 C -0.150 4.150 16 C 0.133 3.867 17 N -0.474 5.474 18 C 0.122 3.878 19 C -0.098 4.098 20 Cl -0.053 7.053 21 C 0.008 3.992 22 C -0.122 4.122 23 H 0.060 0.940 24 H 0.063 0.937 25 H 0.048 0.952 26 H 0.069 0.931 27 H 0.086 0.914 28 H 0.044 0.956 29 H 0.036 0.964 30 H 0.264 0.736 31 H 0.171 0.829 32 H 0.166 0.834 33 H 0.091 0.909 34 H 0.076 0.924 35 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.489 -6.729 -14.826 17.922 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.225 4.225 2 C -0.028 4.028 3 N -0.316 5.316 4 C 0.129 3.871 5 C -0.567 4.567 6 H 0.076 0.924 7 C -0.140 4.140 8 N -0.533 5.533 9 Si 0.726 3.274 10 H -0.201 1.201 11 H -0.212 1.212 12 H -0.202 1.202 13 C 0.336 3.664 14 O -0.399 6.399 15 C -0.156 4.156 16 C -0.024 4.024 17 N -0.182 5.182 18 C -0.036 4.036 19 C -0.127 4.127 20 Cl -0.025 7.025 21 C -0.001 4.001 22 C -0.179 4.179 23 H 0.079 0.921 24 H 0.082 0.918 25 H 0.067 0.933 26 H 0.087 0.913 27 H 0.105 0.895 28 H 0.062 0.938 29 H 0.054 0.946 30 H 0.074 0.926 31 H 0.188 0.812 32 H 0.183 0.817 33 H 0.110 0.890 34 H 0.095 0.905 35 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -6.951 -6.758 -14.860 17.743 hybrid contribution 0.470 0.630 0.495 0.929 sum -6.481 -6.127 -14.365 16.908 Atomic orbital electron populations 1.22166 0.96527 1.01554 1.02261 1.21681 0.94026 0.84047 1.03023 1.48262 1.62261 1.13468 1.07572 1.19337 0.97055 0.92960 0.77737 1.21361 0.98137 1.31090 1.06120 0.92397 1.24923 0.97604 0.94813 0.96613 1.69918 1.35194 1.32148 1.16055 0.86550 0.84462 0.78255 0.78130 1.20139 1.21163 1.20193 1.17806 0.79788 0.85933 0.82869 1.90804 1.43131 1.19206 1.86717 1.21242 1.00061 0.96934 0.97354 1.23107 0.95626 0.90027 0.93677 1.67847 1.14851 1.33843 1.01685 1.22844 0.91349 0.90991 0.98399 1.21841 1.00850 0.97604 0.92359 1.98360 1.65712 1.85732 1.52666 1.20214 0.93279 0.96270 0.90363 1.20947 1.00536 0.92487 1.03890 0.92088 0.91816 0.93303 0.91281 0.89517 0.93842 0.94617 0.92599 0.81206 0.81716 0.89031 0.90472 0.90109 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.28 10.24 37.16 0.38 -1.90 16 2 C 0.10 1.51 5.95 -4.04 -0.02 1.49 16 3 N -0.58 -11.86 2.46 -176.18 -0.43 -12.29 16 4 C 0.25 6.21 5.14 -5.20 -0.03 6.18 16 5 C -0.53 -14.51 9.39 -34.44 -0.32 -14.84 16 6 H 0.06 1.58 7.81 -52.49 -0.41 1.17 16 7 C 0.06 1.75 5.46 -17.81 -0.10 1.65 16 8 N -0.89 -25.96 13.29 55.43 0.74 -25.22 16 9 Si 0.90 21.47 29.54 -169.99 -5.02 16.45 16 10 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 11 H -0.29 -6.74 7.11 56.52 0.40 -6.34 16 12 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 13 C 0.55 11.18 6.08 -12.33 -0.07 11.11 16 14 O -0.52 -12.73 16.21 5.32 0.09 -12.65 16 15 C -0.15 -2.42 5.00 -104.83 -0.52 -2.94 16 16 C 0.13 1.91 8.79 -17.13 -0.15 1.76 16 17 N -0.47 -6.32 10.34 -12.88 -0.13 -6.45 16 18 C 0.12 1.41 10.97 -17.43 -0.19 1.22 16 19 C -0.10 -1.19 6.33 -39.41 -0.25 -1.44 16 20 Cl -0.05 -0.55 27.38 -51.86 -1.42 -1.97 16 21 C 0.01 0.11 5.96 -103.87 -0.62 -0.51 16 22 C -0.12 -1.65 8.96 36.01 0.32 -1.33 16 23 H 0.06 0.68 8.14 -51.93 -0.42 0.26 16 24 H 0.06 0.94 8.14 -51.93 -0.42 0.51 16 25 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 26 H 0.07 0.95 4.19 -51.93 -0.22 0.73 16 27 H 0.09 1.39 8.10 -51.93 -0.42 0.97 16 28 H 0.04 1.23 7.49 -51.93 -0.39 0.84 16 29 H 0.04 0.90 8.07 -51.93 -0.42 0.48 16 30 H 0.26 7.28 8.31 -40.82 -0.34 6.94 16 31 H 0.17 2.27 7.23 -52.49 -0.38 1.89 16 32 H 0.17 1.41 8.06 -52.49 -0.42 0.98 16 33 H 0.09 1.26 8.14 -51.93 -0.42 0.84 16 34 H 0.08 0.86 6.83 -51.93 -0.35 0.51 16 35 H 0.08 1.21 7.35 -51.93 -0.38 0.83 16 LS Contribution 314.81 15.07 4.74 4.74 Total: -1.00 -31.08 314.81 -7.24 -38.32 By element: Atomic # 1 Polarization: 2.84 SS G_CDS: -4.22 Total: -1.38 kcal Atomic # 6 Polarization: 2.03 SS G_CDS: -1.58 Total: 0.45 kcal Atomic # 7 Polarization: -44.13 SS G_CDS: 0.17 Total: -43.96 kcal Atomic # 8 Polarization: -12.73 SS G_CDS: 0.09 Total: -12.65 kcal Atomic # 14 Polarization: 21.47 SS G_CDS: -5.02 Total: 16.45 kcal Atomic # 17 Polarization: -0.55 SS G_CDS: -1.42 Total: -1.97 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -31.08 -7.24 -38.32 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000457481261.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.817 kcal (2) G-P(sol) polarization free energy of solvation -31.080 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.263 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.238 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.318 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.501 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds