Wall clock time and date at job start Tue Mar 31 2020 05:53:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52996 * 109.47503 * 2 1 4 4 N 1.46495 * 109.47113 * 179.97438 * 3 2 1 5 5 C 1.36878 * 120.00094 * 263.45489 * 4 3 2 6 6 H 1.07997 * 120.00254 * 144.18238 * 5 4 3 7 7 C 1.39046 * 119.99807 * 324.17533 * 5 4 3 8 8 N 1.31366 * 120.00288 * 342.30089 * 7 5 4 9 9 Si 1.86803 * 119.99903 * 162.29482 * 7 5 4 10 10 H 1.48498 * 109.47025 * 60.00108 * 9 7 5 11 11 H 1.48495 * 109.47093 * 180.02562 * 9 7 5 12 12 H 1.48503 * 109.46987 * 300.00665 * 9 7 5 13 13 C 1.34772 * 120.00109 * 83.45624 * 4 3 2 14 14 O 1.21598 * 119.99871 * 4.66617 * 13 4 3 15 15 C 1.47724 * 120.00263 * 184.66982 * 13 4 3 16 16 C 1.39633 * 120.55925 * 319.00098 * 15 13 4 17 17 N 1.31651 * 120.58285 * 179.97438 * 16 15 13 18 18 C 1.31951 * 121.90532 * 0.02585 * 17 16 15 19 19 C 1.38451 * 121.07469 * 359.97438 * 18 17 16 20 20 Cl 1.73598 * 120.35763 * 180.02562 * 19 18 17 21 21 C 1.38493 * 119.28449 * 359.97438 * 19 18 17 22 22 C 1.50701 * 120.86397 * 180.29528 * 21 19 18 23 23 H 1.09002 * 109.46921 * 59.99984 * 1 2 3 24 24 H 1.08999 * 109.47577 * 179.97438 * 1 2 3 25 25 H 1.08999 * 109.47269 * 300.00400 * 1 2 3 26 26 H 1.08999 * 109.47269 * 239.99600 * 2 1 3 27 27 H 1.09002 * 109.46921 * 120.00015 * 2 1 3 28 28 H 1.09008 * 109.46788 * 59.99966 * 3 2 1 29 29 H 1.09002 * 109.47045 * 299.99940 * 3 2 1 30 30 H 0.97000 * 120.00067 * 179.97438 * 8 7 5 31 31 H 1.07999 * 119.70800 * 0.02562 * 16 15 13 32 32 H 1.07993 * 119.46728 * 179.97438 * 18 17 16 33 33 H 1.08996 * 109.47303 * 269.32983 * 22 21 19 34 34 H 1.09005 * 109.46876 * 29.32672 * 22 21 19 35 35 H 1.08997 * 109.46782 * 149.32839 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 7 3.5050 1.4423 0.0006 5 6 4.1890 1.5776 1.1785 6 1 5.1156 1.0439 1.3293 7 6 3.6906 2.4023 2.1810 8 7 2.7811 3.3063 1.8963 9 14 4.3144 2.2245 3.9328 10 1 5.7791 2.4671 3.9637 11 1 3.6300 3.2127 4.8046 12 1 4.0297 0.8518 4.4227 13 6 4.1794 1.3091 -1.1586 14 8 3.5749 1.2743 -2.2131 15 6 5.6529 1.2053 -1.1483 16 6 6.4151 2.0069 -0.2961 17 7 7.7284 1.9144 -0.2861 18 6 8.3741 1.0723 -1.0703 19 6 7.6918 0.2428 -1.9439 20 17 8.5602 -0.8587 -2.9668 21 6 6.3089 0.3005 -1.9922 22 6 5.5300 -0.5907 -2.9250 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 -1.0276 -0.0005 25 1 -0.3634 0.5139 0.8899 26 1 1.8934 -0.5139 -0.8899 27 1 1.8933 -0.5139 0.8900 28 1 1.6767 1.9563 0.8901 29 1 1.6768 1.9563 -0.8900 30 1 2.4332 3.8814 2.5957 31 1 5.9230 2.7084 0.3613 32 1 9.4525 1.0293 -1.0300 33 1 5.3875 -0.0825 -3.8786 34 1 6.0806 -1.5177 -3.0860 35 1 4.5588 -0.8167 -2.4850 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000457496783.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:53:35 Heat of formation + Delta-G solvation = -13.455672 kcal Electronic energy + Delta-G solvation = -20346.658175 eV Core-core repulsion = 17177.450460 eV Total energy + Delta-G solvation = -3169.207716 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -40.18477 -38.28204 -36.43090 -35.38742 -33.27871 -33.01327 -31.65976 -30.46481 -27.66186 -25.99897 -25.04784 -23.32836 -21.92680 -20.80947 -19.43780 -17.73625 -16.74843 -16.02315 -15.91584 -15.07338 -14.67307 -14.33739 -14.27403 -13.81259 -13.52538 -13.11556 -12.64304 -12.54527 -12.48720 -12.30972 -11.73479 -11.70403 -11.54611 -11.38525 -11.32803 -11.04181 -10.96020 -10.76601 -10.47948 -10.39351 -9.88275 -9.53494 -9.13206 -9.04062 -8.61484 -8.44408 -7.69410 -6.54673 -4.25503 1.19860 1.44004 2.22393 3.05728 3.13350 3.15672 3.64028 3.96037 4.18891 4.51067 4.71777 4.88338 4.99164 5.16986 5.39324 5.69609 5.71468 5.77255 5.91230 5.93725 5.99534 6.11958 6.20905 6.36587 6.42438 6.47627 6.58239 6.69136 6.74113 6.96865 7.02560 7.19928 7.37325 7.72642 8.17826 8.24245 8.85672 9.28106 9.70841 10.44365 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.016599 B = 0.006722 C = 0.005191 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1686.397413 B = 4164.677569 C = 5392.628129 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.135 4.135 3 C 0.113 3.887 4 N -0.421 5.421 5 C -0.351 4.351 6 H 0.093 0.907 7 C 0.049 3.951 8 N -0.852 5.852 9 Si 0.913 3.087 10 H -0.266 1.266 11 H -0.281 1.281 12 H -0.271 1.271 13 C 0.507 3.493 14 O -0.592 6.592 15 C -0.132 4.132 16 C 0.154 3.846 17 N -0.486 5.486 18 C 0.113 3.887 19 C -0.108 4.108 20 Cl -0.069 7.069 21 C -0.002 4.002 22 C -0.110 4.110 23 H 0.050 0.950 24 H 0.045 0.955 25 H 0.052 0.948 26 H 0.052 0.948 27 H 0.058 0.942 28 H 0.113 0.887 29 H 0.055 0.945 30 H 0.275 0.725 31 H 0.190 0.810 32 H 0.158 0.842 33 H 0.082 0.918 34 H 0.066 0.934 35 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.520 -5.385 -2.763 7.554 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 C -0.174 4.174 3 C -0.010 4.010 4 N -0.136 5.136 5 C -0.479 4.479 6 H 0.110 0.890 7 C -0.159 4.159 8 N -0.487 5.487 9 Si 0.739 3.261 10 H -0.191 1.191 11 H -0.206 1.206 12 H -0.196 1.196 13 C 0.295 3.705 14 O -0.478 6.478 15 C -0.137 4.137 16 C -0.003 4.003 17 N -0.195 5.195 18 C -0.044 4.044 19 C -0.137 4.137 20 Cl -0.041 7.041 21 C -0.011 4.011 22 C -0.167 4.167 23 H 0.069 0.931 24 H 0.064 0.936 25 H 0.071 0.929 26 H 0.070 0.930 27 H 0.076 0.924 28 H 0.131 0.869 29 H 0.074 0.926 30 H 0.085 0.915 31 H 0.207 0.793 32 H 0.175 0.825 33 H 0.101 0.899 34 H 0.085 0.915 35 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 4.605 -4.791 -2.666 7.160 hybrid contribution -0.038 -0.696 0.365 0.787 sum 4.567 -5.487 -2.301 7.500 Atomic orbital electron populations 1.21643 0.96359 1.00520 1.01495 1.21847 0.94959 0.99291 1.01287 1.21568 0.80578 0.94657 1.04215 1.43354 1.05143 1.60298 1.04846 1.19498 1.08981 1.27165 0.92211 0.88991 1.25364 0.96621 0.93541 1.00383 1.69832 1.28088 1.16578 1.34205 0.86192 0.79660 0.78518 0.81754 1.19104 1.20596 1.19639 1.17900 0.85425 0.82725 0.84456 1.90642 1.69254 1.57034 1.30886 1.21057 0.96735 0.98260 0.97651 1.23877 0.87947 0.95461 0.93004 1.67948 1.10641 1.19519 1.21420 1.22780 1.00409 0.90689 0.90549 1.21776 0.92503 0.99352 1.00080 1.98324 1.76003 1.62377 1.67361 1.20250 0.91365 0.94696 0.94760 1.20817 1.00062 0.97314 0.98471 0.93061 0.93580 0.92910 0.92953 0.92350 0.86930 0.92630 0.91479 0.79347 0.82520 0.89902 0.91533 0.90046 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.28 9.91 37.16 0.37 -1.91 16 2 C -0.14 -2.63 6.21 -26.73 -0.17 -2.80 16 3 C 0.11 2.55 4.89 -4.05 -0.02 2.53 16 4 N -0.42 -10.01 2.55 -115.93 -0.30 -10.30 16 5 C -0.35 -8.28 6.65 -15.00 -0.10 -8.38 16 6 H 0.09 2.15 6.22 -52.49 -0.33 1.82 16 7 C 0.05 1.13 5.01 -17.45 -0.09 1.05 16 8 N -0.85 -20.83 11.19 55.50 0.62 -20.21 16 9 Si 0.91 18.45 29.59 -169.99 -5.03 13.42 16 10 H -0.27 -5.37 7.11 56.52 0.40 -4.97 16 11 H -0.28 -5.66 7.11 56.52 0.40 -5.26 16 12 H -0.27 -5.50 7.11 56.52 0.40 -5.09 16 13 C 0.51 11.94 6.61 -12.39 -0.08 11.86 16 14 O -0.59 -14.87 14.91 5.28 0.08 -14.79 16 15 C -0.13 -2.77 5.30 -104.83 -0.56 -3.32 16 16 C 0.15 3.13 8.89 -17.11 -0.15 2.98 16 17 N -0.49 -9.07 10.34 -12.86 -0.13 -9.20 16 18 C 0.11 1.82 10.97 -17.42 -0.19 1.63 16 19 C -0.11 -1.76 6.33 -39.41 -0.25 -2.01 16 20 Cl -0.07 -0.93 27.45 -51.86 -1.42 -2.36 16 21 C 0.00 -0.03 5.95 -103.85 -0.62 -0.65 16 22 C -0.11 -1.86 8.64 36.01 0.31 -1.55 16 23 H 0.05 0.80 8.14 -51.93 -0.42 0.37 16 24 H 0.05 0.64 8.14 -51.93 -0.42 0.22 16 25 H 0.05 0.82 8.14 -51.93 -0.42 0.40 16 26 H 0.05 1.05 8.14 -51.93 -0.42 0.63 16 27 H 0.06 1.15 8.14 -51.93 -0.42 0.73 16 28 H 0.11 2.68 5.33 -51.92 -0.28 2.40 16 29 H 0.06 1.31 7.56 -51.93 -0.39 0.92 16 30 H 0.27 6.36 8.31 -40.82 -0.34 6.03 16 31 H 0.19 4.06 6.22 -52.49 -0.33 3.74 16 32 H 0.16 2.01 8.06 -52.49 -0.42 1.58 16 33 H 0.08 1.37 8.14 -51.93 -0.42 0.95 16 34 H 0.07 0.96 7.00 -51.93 -0.36 0.60 16 35 H 0.08 1.51 6.68 -51.93 -0.35 1.16 16 LS Contribution 306.96 15.07 4.63 4.63 Total: -1.00 -25.93 306.96 -7.23 -33.16 By element: Atomic # 1 Polarization: 10.35 SS G_CDS: -4.13 Total: 6.22 kcal Atomic # 6 Polarization: 0.97 SS G_CDS: -1.54 Total: -0.57 kcal Atomic # 7 Polarization: -39.91 SS G_CDS: 0.19 Total: -39.71 kcal Atomic # 8 Polarization: -14.87 SS G_CDS: 0.08 Total: -14.79 kcal Atomic # 14 Polarization: 18.45 SS G_CDS: -5.03 Total: 13.42 kcal Atomic # 17 Polarization: -0.93 SS G_CDS: -1.42 Total: -2.36 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -25.93 -7.23 -33.16 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000457496783.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.703 kcal (2) G-P(sol) polarization free energy of solvation -25.934 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.231 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.159 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.456 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds