Wall clock time and date at job start Tue Mar 31 2020 05:17:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38510 * 120.85822 * 2 1 4 4 Cl 1.73601 * 120.36359 * 0.27488 * 3 2 1 5 5 C 1.38423 * 119.27694 * 180.24984 * 3 2 1 6 6 N 1.31941 * 121.06324 * 0.02562 * 5 3 2 7 7 C 1.31654 * 121.89511 * 359.97438 * 6 5 3 8 8 C 1.39564 * 120.59463 * 359.97438 * 7 6 5 9 9 C 1.47841 * 120.55272 * 180.02562 * 8 7 6 10 10 O 1.21558 * 120.00053 * 173.99197 * 9 8 7 11 11 N 1.34782 * 120.00366 * 353.99448 * 9 8 7 12 12 C 1.46496 * 120.00337 * 180.02562 * 11 9 8 13 13 C 1.52996 * 109.47349 * 179.97438 * 12 11 9 14 14 C 1.52994 * 109.47210 * 179.97438 * 13 12 11 15 15 C 1.50702 * 109.47209 * 179.97438 * 14 13 12 16 16 H 1.07995 * 119.99896 * 0.02562 * 15 14 13 17 17 C 1.37882 * 120.00014 * 179.97438 * 15 14 13 18 18 N 1.31505 * 120.00203 * 0.02562 * 17 15 14 19 19 Si 1.86802 * 119.99872 * 180.02562 * 17 15 14 20 20 H 1.48501 * 109.47060 * 89.99843 * 19 17 15 21 21 H 1.48494 * 109.47045 * 210.00057 * 19 17 15 22 22 H 1.48507 * 109.47144 * 330.00214 * 19 17 15 23 23 H 1.09010 * 109.47007 * 263.21093 * 1 2 3 24 24 H 1.08993 * 109.47461 * 23.21275 * 1 2 3 25 25 H 1.09002 * 109.46845 * 143.21397 * 1 2 3 26 26 H 1.08006 * 119.46806 * 180.02562 * 5 3 2 27 27 H 1.08003 * 119.70529 * 179.97438 * 7 6 5 28 28 H 0.97001 * 119.99241 * 359.97438 * 11 9 8 29 29 H 1.09006 * 109.47065 * 299.99882 * 12 11 9 30 30 H 1.09002 * 109.47122 * 59.99502 * 12 11 9 31 31 H 1.09000 * 109.47022 * 299.99561 * 13 12 11 32 32 H 1.08993 * 109.47413 * 59.99471 * 13 12 11 33 33 H 1.09003 * 109.47686 * 299.99712 * 14 13 12 34 34 H 1.09000 * 109.47324 * 60.00223 * 14 13 12 35 35 H 0.97006 * 120.00376 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2175 1.1890 0.0000 4 17 1.3817 2.7106 0.0072 5 6 3.6011 1.1508 -0.0053 6 7 4.2505 0.0023 -0.0108 7 6 3.6198 -1.1534 -0.0110 8 6 2.2250 -1.2014 -0.0049 9 6 1.5177 -2.4997 -0.0046 10 8 0.3081 -2.5328 0.1110 11 7 2.2141 -3.6466 -0.1324 12 6 1.5132 -4.9330 -0.1327 13 6 2.5281 -6.0668 -0.2912 14 6 1.7962 -7.4103 -0.2908 15 6 2.7959 -8.5270 -0.4476 16 1 3.8480 -8.3011 -0.5380 17 6 2.3672 -9.8373 -0.4746 18 7 1.0861 -10.1124 -0.3640 19 14 3.6065 -11.2215 -0.6682 20 1 4.0707 -11.6614 0.6720 21 1 2.9674 -12.3634 -1.3701 22 1 4.7667 -10.7401 -1.4605 23 1 -0.3633 -0.1215 1.0206 24 1 -0.3634 0.9444 -0.4050 25 1 -0.3633 -0.8231 -0.6154 26 1 4.1582 2.0761 -0.0049 27 1 4.1869 -2.0725 -0.0160 28 1 3.1793 -3.6200 -0.2249 29 1 0.9762 -5.0544 0.8082 30 1 0.8054 -4.9609 -0.9611 31 1 3.0646 -5.9452 -1.2322 32 1 3.2363 -6.0390 0.5369 33 1 1.2599 -7.5317 0.6504 34 1 1.0879 -7.4384 -1.1188 35 1 0.7845 -11.0342 -0.3826 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000457537407.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:17:24 Heat of formation + Delta-G solvation = -25.792020 kcal Electronic energy + Delta-G solvation = -18708.034709 eV Core-core repulsion = 15538.292049 eV Total energy + Delta-G solvation = -3169.742660 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.09817 -39.15289 -37.08937 -35.73328 -34.03304 -33.48990 -32.06179 -30.87506 -28.39708 -26.78037 -24.83129 -23.29243 -22.42457 -20.99448 -20.33791 -17.97179 -17.39233 -16.70073 -16.38466 -15.74917 -15.60367 -15.35798 -14.84323 -14.47966 -13.86875 -13.76436 -13.34928 -13.13015 -13.03565 -12.41219 -12.36637 -12.27511 -11.90943 -11.78905 -11.58219 -10.93731 -10.79857 -10.63316 -10.36119 -9.94217 -9.92428 -9.76258 -9.43918 -9.39820 -9.16473 -8.92483 -8.40780 -6.05371 -4.08664 0.16750 0.59221 1.56315 2.61688 3.10229 3.28746 3.35428 3.38074 3.38937 3.86283 4.15399 4.22810 4.40343 4.44328 4.65094 4.90073 5.15527 5.30661 5.31525 5.49125 5.59197 5.68333 5.73935 5.86177 6.06832 6.10632 6.34564 6.51363 6.71972 6.92587 7.29948 7.47856 7.58856 7.70583 7.92839 8.12643 8.33859 8.97958 9.55886 11.05895 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.044382 B = 0.002678 C = 0.002534 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 630.734708 B =10453.811544 C =11046.637946 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 C 0.028 3.972 3 C -0.105 4.105 4 Cl -0.046 7.046 5 C 0.136 3.864 6 N -0.476 5.476 7 C 0.142 3.858 8 C -0.177 4.177 9 C 0.557 3.443 10 O -0.528 6.528 11 N -0.717 5.717 12 C 0.116 3.884 13 C -0.122 4.122 14 C 0.024 3.976 15 C -0.523 4.523 16 H 0.056 0.944 17 C 0.057 3.943 18 N -0.894 5.894 19 Si 0.893 3.107 20 H -0.280 1.280 21 H -0.286 1.286 22 H -0.274 1.274 23 H 0.089 0.911 24 H 0.070 0.930 25 H 0.105 0.895 26 H 0.169 0.831 27 H 0.168 0.832 28 H 0.398 0.602 29 H 0.068 0.932 30 H 0.068 0.932 31 H 0.055 0.945 32 H 0.055 0.945 33 H 0.019 0.981 34 H 0.019 0.981 35 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.015 24.495 0.647 24.688 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.019 3.981 3 C -0.134 4.134 4 Cl -0.018 7.018 5 C -0.021 4.021 6 N -0.185 5.185 7 C -0.016 4.016 8 C -0.183 4.183 9 C 0.343 3.657 10 O -0.406 6.406 11 N -0.367 5.367 12 C -0.006 4.006 13 C -0.160 4.160 14 C -0.014 4.014 15 C -0.562 4.562 16 H 0.074 0.926 17 C -0.144 4.144 18 N -0.533 5.533 19 Si 0.721 3.279 20 H -0.206 1.206 21 H -0.212 1.212 22 H -0.199 1.199 23 H 0.107 0.893 24 H 0.089 0.911 25 H 0.123 0.877 26 H 0.187 0.813 27 H 0.185 0.815 28 H 0.233 0.767 29 H 0.087 0.913 30 H 0.086 0.914 31 H 0.074 0.926 32 H 0.074 0.926 33 H 0.038 0.962 34 H 0.038 0.962 35 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 2.844 24.424 0.724 24.600 hybrid contribution 0.229 -0.702 -0.107 0.746 sum 3.073 23.722 0.617 23.928 Atomic orbital electron populations 1.21190 0.88034 1.04346 1.04810 1.20393 0.98344 0.89759 0.89591 1.21937 0.93993 0.88075 1.09431 1.98379 1.78129 1.28369 1.96875 1.22989 0.89363 0.97379 0.92331 1.67861 1.39493 0.97793 1.13309 1.23167 0.90559 0.96826 0.91093 1.20983 0.94919 0.94417 1.07938 1.17872 0.87049 0.83291 0.77536 1.90756 1.13380 1.86964 1.49494 1.46152 1.10968 1.06483 1.73115 1.21738 0.96092 0.80409 1.02338 1.21910 0.97596 0.95573 1.00932 1.19027 0.95687 0.88945 0.97698 1.21194 0.93526 0.91098 1.50356 0.92611 1.25027 0.95186 0.98977 0.95246 1.69957 1.13727 1.19331 1.50247 0.86580 0.81338 0.81783 0.78215 1.20635 1.21192 1.19868 0.89296 0.91115 0.87653 0.81347 0.81461 0.76733 0.91342 0.91367 0.92582 0.92581 0.96233 0.96231 0.92884 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -1.35 8.55 36.01 0.31 -1.05 16 2 C 0.03 0.31 5.96 -103.88 -0.62 -0.31 16 3 C -0.11 -0.99 6.33 -39.41 -0.25 -1.24 16 4 Cl -0.05 -0.38 27.35 -51.86 -1.42 -1.79 16 5 C 0.14 1.20 10.97 -17.44 -0.19 1.01 16 6 N -0.48 -4.84 10.34 -12.88 -0.13 -4.97 16 7 C 0.14 1.40 10.70 -17.13 -0.18 1.21 16 8 C -0.18 -2.02 5.89 -104.83 -0.62 -2.64 16 9 C 0.56 7.66 7.72 -12.33 -0.10 7.56 16 10 O -0.53 -8.76 13.52 5.31 0.07 -8.69 16 11 N -0.72 -9.36 5.51 -61.25 -0.34 -9.70 16 12 C 0.12 1.89 5.67 -4.05 -0.02 1.87 16 13 C -0.12 -2.25 5.27 -26.74 -0.14 -2.39 16 14 C 0.02 0.59 4.97 -27.88 -0.14 0.45 16 15 C -0.52 -14.30 9.11 -34.44 -0.31 -14.62 16 16 H 0.06 1.47 7.74 -52.49 -0.41 1.06 16 17 C 0.06 1.61 5.46 -17.82 -0.10 1.51 16 18 N -0.89 -26.44 13.29 55.43 0.74 -25.71 16 19 Si 0.89 21.19 29.54 -169.99 -5.02 16.17 16 20 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 21 H -0.29 -6.75 7.11 56.52 0.40 -6.35 16 22 H -0.27 -6.34 7.11 56.52 0.40 -5.94 16 23 H 0.09 0.94 8.14 -51.92 -0.42 0.52 16 24 H 0.07 0.63 6.77 -51.93 -0.35 0.28 16 25 H 0.11 1.31 5.99 -51.93 -0.31 1.00 16 26 H 0.17 1.02 8.06 -52.48 -0.42 0.60 16 27 H 0.17 1.24 6.47 -52.48 -0.34 0.90 16 28 H 0.40 4.06 6.57 -40.82 -0.27 3.79 16 29 H 0.07 1.18 8.14 -51.93 -0.42 0.76 16 30 H 0.07 1.17 8.14 -51.93 -0.42 0.75 16 31 H 0.06 0.99 8.14 -51.93 -0.42 0.57 16 32 H 0.06 0.99 8.14 -51.93 -0.42 0.57 16 33 H 0.02 0.51 8.14 -51.93 -0.42 0.09 16 34 H 0.02 0.51 8.14 -51.93 -0.42 0.09 16 35 H 0.26 7.30 8.31 -40.82 -0.34 6.96 16 LS Contribution 314.38 15.07 4.74 4.74 Total: -1.00 -31.19 314.38 -7.92 -39.11 By element: Atomic # 1 Polarization: 3.67 SS G_CDS: -4.19 Total: -0.53 kcal Atomic # 6 Polarization: -6.27 SS G_CDS: -2.36 Total: -8.63 kcal Atomic # 7 Polarization: -40.64 SS G_CDS: 0.27 Total: -40.38 kcal Atomic # 8 Polarization: -8.76 SS G_CDS: 0.07 Total: -8.69 kcal Atomic # 14 Polarization: 21.19 SS G_CDS: -5.02 Total: 16.17 kcal Atomic # 17 Polarization: -0.38 SS G_CDS: -1.42 Total: -1.79 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -31.19 -7.92 -39.11 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000457537407.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.316 kcal (2) G-P(sol) polarization free energy of solvation -31.189 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.874 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.918 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.108 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.792 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds