Wall clock time and date at job start Tue Mar 31 2020 05:51:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.53000 * 109.47168 * 2 1 4 4 N 1.46503 * 109.46701 * 120.00125 * 2 1 3 5 5 C 1.46504 * 119.99656 * 294.70423 * 4 2 1 6 6 C 1.50703 * 109.47568 * 262.66537 * 5 4 2 7 7 H 1.07998 * 119.99428 * 0.02562 * 6 5 4 8 8 C 1.37869 * 119.99957 * 179.97438 * 6 5 4 9 9 N 1.31513 * 120.00251 * 0.02562 * 8 6 5 10 10 Si 1.86803 * 119.99975 * 180.02562 * 8 6 5 11 11 H 1.48503 * 109.46944 * 0.02562 * 10 8 6 12 12 H 1.48499 * 109.47102 * 120.00013 * 10 8 6 13 13 H 1.48499 * 109.47520 * 240.00914 * 10 8 6 14 14 C 1.34767 * 120.00148 * 114.71335 * 4 2 1 15 15 O 1.21527 * 120.00144 * 3.62391 * 14 4 2 16 16 C 1.48092 * 119.99889 * 183.62887 * 14 4 2 17 17 N 1.32774 * 119.73723 * 354.13806 * 16 14 4 18 18 C 1.31463 * 121.65666 * 179.97438 * 17 16 14 19 19 C 1.38646 * 120.94003 * 359.97438 * 18 17 16 20 20 C 1.38518 * 119.37499 * 0.30399 * 19 18 17 21 21 C 1.38815 * 118.47297 * 359.45634 * 20 19 18 22 22 Cl 1.73602 * 120.48458 * 180.26422 * 21 20 19 23 23 H 1.08997 * 109.47204 * 300.00181 * 1 2 3 24 24 H 1.09003 * 109.46552 * 60.00416 * 1 2 3 25 25 H 1.08992 * 109.47000 * 179.97438 * 1 2 3 26 26 H 1.08997 * 109.47204 * 239.99819 * 2 1 3 27 27 H 1.08998 * 109.46908 * 179.97438 * 3 2 1 28 28 H 1.08997 * 109.47284 * 299.99659 * 3 2 1 29 29 H 1.08997 * 109.47206 * 59.99820 * 3 2 1 30 30 H 1.08999 * 109.47461 * 22.67376 * 5 4 2 31 31 H 1.09001 * 109.46723 * 142.66588 * 5 4 2 32 32 H 0.97006 * 119.99963 * 179.97438 * 9 8 6 33 33 H 1.07991 * 119.53138 * 179.97438 * 18 17 16 34 34 H 1.08001 * 120.31753 * 180.02562 * 19 18 17 35 35 H 1.07994 * 120.76299 * 179.69662 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 7 2.0183 -0.6907 1.1962 5 6 1.7624 -0.1261 2.5237 6 6 2.9698 0.6518 2.9801 7 1 3.8404 0.7193 2.3446 8 6 2.9624 1.2782 4.2082 9 7 1.9019 1.1964 4.9817 10 14 4.4587 2.2430 4.7737 11 1 5.5111 2.1822 3.7277 12 1 4.0754 3.6585 5.0079 13 1 4.9790 1.6558 6.0345 14 6 2.7029 -1.8452 1.0755 15 8 2.9725 -2.2794 -0.0271 16 6 3.1267 -2.5849 2.2864 17 7 2.9332 -2.0501 3.4862 18 6 3.2941 -2.6735 4.5859 19 6 3.8942 -3.9223 4.5331 20 6 4.1209 -4.5157 3.3022 21 6 3.7251 -3.8374 2.1576 22 17 3.9777 -4.5357 0.5884 23 1 -0.3633 0.5138 0.8899 24 1 -0.3632 0.5138 -0.8901 25 1 -0.3633 -1.0276 -0.0005 26 1 1.8934 -0.5138 -0.8899 27 1 3.1300 1.4424 0.0005 28 1 1.6768 1.9563 -0.8900 29 1 1.6767 1.9563 0.8899 30 1 0.8992 0.5377 2.4760 31 1 1.5620 -0.9326 3.2290 32 1 1.8969 1.6368 5.8460 33 1 3.1207 -2.2064 5.5440 34 1 4.1863 -4.4256 5.4429 35 1 4.5911 -5.4855 3.2348 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000549971175.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:51:45 Heat of formation + Delta-G solvation = 19.960742 kcal Electronic energy + Delta-G solvation = -20717.008347 eV Core-core repulsion = 17549.249676 eV Total energy + Delta-G solvation = -3167.758671 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -40.20466 -38.45691 -36.24969 -35.62543 -33.06531 -32.22386 -31.15616 -30.32082 -27.11643 -26.51215 -24.41150 -23.16090 -22.83529 -21.07083 -18.64330 -16.99186 -16.66707 -16.28016 -15.84855 -15.30338 -14.68942 -14.54882 -14.20587 -13.49372 -13.40390 -13.14413 -12.95857 -12.28556 -12.23234 -12.07671 -11.64816 -11.57353 -11.54236 -11.27660 -10.92980 -10.89770 -10.70807 -10.61761 -10.32296 -9.86700 -9.54949 -9.45666 -9.12748 -8.60575 -8.55479 -8.05881 -7.52406 -5.98632 -3.96580 0.99234 1.44394 2.43267 3.27057 3.36101 3.37872 3.43537 3.79640 4.32177 4.45709 4.79008 4.98562 5.06472 5.19811 5.37113 5.50292 5.63375 5.71068 5.74056 5.88556 6.08211 6.15847 6.22061 6.22981 6.41752 6.46075 6.71925 6.81618 6.95726 7.06330 7.60772 7.84406 7.95355 8.27584 8.34915 8.41982 8.96627 9.09305 9.62677 11.09221 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.013923 B = 0.008769 C = 0.006149 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2010.569289 B = 3192.202995 C = 4552.799694 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.133 3.867 3 C -0.150 4.150 4 N -0.569 5.569 5 C 0.225 3.775 6 C -0.489 4.489 7 H 0.050 0.950 8 C 0.067 3.933 9 N -0.891 5.891 10 Si 0.881 3.119 11 H -0.276 1.276 12 H -0.286 1.286 13 H -0.286 1.286 14 C 0.559 3.441 15 O -0.553 6.553 16 C 0.094 3.906 17 N -0.365 5.365 18 C 0.094 3.906 19 C -0.151 4.151 20 C -0.092 4.092 21 C -0.048 4.048 22 Cl -0.036 7.036 23 H 0.063 0.937 24 H 0.058 0.942 25 H 0.050 0.950 26 H 0.087 0.913 27 H 0.055 0.945 28 H 0.049 0.951 29 H 0.073 0.927 30 H 0.026 0.974 31 H 0.083 0.917 32 H 0.258 0.742 33 H 0.164 0.836 34 H 0.139 0.861 35 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.676 -8.427 -2.168 8.727 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.215 4.215 2 C 0.030 3.970 3 C -0.208 4.208 4 N -0.299 5.299 5 C 0.106 3.894 6 C -0.529 4.529 7 H 0.069 0.931 8 C -0.134 4.134 9 N -0.531 5.531 10 Si 0.709 3.291 11 H -0.201 1.201 12 H -0.212 1.212 13 H -0.212 1.212 14 C 0.346 3.654 15 O -0.432 6.432 16 C -0.045 4.045 17 N -0.075 5.075 18 C -0.065 4.065 19 C -0.171 4.171 20 C -0.119 4.119 21 C -0.078 4.078 22 Cl -0.007 7.007 23 H 0.082 0.918 24 H 0.077 0.923 25 H 0.069 0.931 26 H 0.105 0.895 27 H 0.074 0.926 28 H 0.068 0.932 29 H 0.092 0.908 30 H 0.044 0.956 31 H 0.100 0.900 32 H 0.068 0.932 33 H 0.181 0.819 34 H 0.157 0.843 35 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 0.346 -7.784 -2.684 8.242 hybrid contribution 1.406 -0.168 0.574 1.528 sum 1.752 -7.953 -2.110 8.412 Atomic orbital electron populations 1.22124 0.95795 1.01601 1.02023 1.20925 0.93430 0.93631 0.89064 1.22032 1.01593 0.95429 1.01776 1.48326 1.51111 1.20656 1.09775 1.20108 0.96413 0.95738 0.77113 1.21300 1.00520 1.29420 1.01640 0.93128 1.24739 0.95566 0.96666 0.96435 1.69936 1.28077 1.44371 1.10749 0.86722 0.83741 0.80006 0.78612 1.20108 1.21203 1.21182 1.17749 0.79242 0.81580 0.86876 1.90754 1.57543 1.68935 1.26018 1.21328 0.98109 0.91126 0.93978 1.69031 1.12022 1.29738 0.96724 1.23255 0.93700 0.91183 0.98386 1.22365 0.99841 0.97106 0.97808 1.21381 0.99353 1.00360 0.90796 1.22035 1.01894 0.95335 0.88576 1.98380 1.94738 1.82965 1.24575 0.91780 0.92321 0.93053 0.89529 0.92605 0.93218 0.90759 0.95635 0.89962 0.93212 0.81881 0.84340 0.84137 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.57 9.26 37.16 0.34 -2.23 16 2 C 0.13 2.52 3.22 -67.93 -0.22 2.30 16 3 C -0.15 -2.73 8.67 37.16 0.32 -2.41 16 4 N -0.57 -12.40 2.38 -168.48 -0.40 -12.80 16 5 C 0.23 5.37 3.90 -5.19 -0.02 5.35 16 6 C -0.49 -12.58 7.19 -34.44 -0.25 -12.83 16 7 H 0.05 1.38 7.81 -52.49 -0.41 0.97 16 8 C 0.07 1.74 5.46 -17.82 -0.10 1.65 16 9 N -0.89 -23.90 13.29 55.43 0.74 -23.16 16 10 Si 0.88 20.70 29.54 -169.99 -5.02 15.68 16 11 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 12 H -0.29 -6.73 7.11 56.52 0.40 -6.33 16 13 H -0.29 -6.65 7.11 56.52 0.40 -6.24 16 14 C 0.56 12.39 7.57 -12.22 -0.09 12.29 16 15 O -0.55 -12.54 13.32 5.34 0.07 -12.47 16 16 C 0.09 1.93 6.63 -82.98 -0.55 1.38 16 17 N -0.36 -7.57 5.01 -9.78 -0.05 -7.62 16 18 C 0.09 1.59 11.18 -17.56 -0.20 1.39 16 19 C -0.15 -2.02 10.11 -39.33 -0.40 -2.42 16 20 C -0.09 -1.30 9.98 -39.27 -0.39 -1.69 16 21 C -0.05 -0.85 6.37 -38.93 -0.25 -1.10 16 22 Cl -0.04 -0.61 26.05 -51.86 -1.35 -1.96 16 23 H 0.06 1.10 6.93 -51.93 -0.36 0.74 16 24 H 0.06 0.80 8.14 -51.93 -0.42 0.38 16 25 H 0.05 0.83 8.14 -51.93 -0.42 0.41 16 26 H 0.09 1.66 6.91 -51.93 -0.36 1.31 16 27 H 0.05 1.08 8.14 -51.93 -0.42 0.66 16 28 H 0.05 0.74 8.14 -51.93 -0.42 0.32 16 29 H 0.07 1.48 7.09 -51.93 -0.37 1.11 16 30 H 0.03 0.64 6.47 -51.93 -0.34 0.31 16 31 H 0.08 2.06 5.18 -53.06 -0.28 1.78 16 32 H 0.26 6.66 8.31 -40.82 -0.34 6.32 16 33 H 0.16 2.59 8.06 -52.49 -0.42 2.16 16 34 H 0.14 1.32 8.06 -52.49 -0.42 0.90 16 35 H 0.14 1.51 8.06 -52.49 -0.42 1.09 16 LS Contribution 305.89 15.07 4.61 4.61 Total: -1.00 -28.94 305.89 -7.40 -36.34 By element: Atomic # 1 Polarization: 3.89 SS G_CDS: -4.20 Total: -0.31 kcal Atomic # 6 Polarization: 3.49 SS G_CDS: -1.79 Total: 1.70 kcal Atomic # 7 Polarization: -43.87 SS G_CDS: 0.29 Total: -43.58 kcal Atomic # 8 Polarization: -12.54 SS G_CDS: 0.07 Total: -12.47 kcal Atomic # 14 Polarization: 20.70 SS G_CDS: -5.02 Total: 15.68 kcal Atomic # 17 Polarization: -0.61 SS G_CDS: -1.35 Total: -1.96 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -28.94 -7.40 -36.34 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000549971175.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.305 kcal (2) G-P(sol) polarization free energy of solvation -28.944 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.362 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.401 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.345 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.961 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds