Wall clock time and date at job start Tue Mar 31 2020 06:24:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46903 * 1 3 3 C 1.46906 * 111.00091 * 2 1 4 4 C 1.46898 * 111.00065 * 123.94947 * 2 1 3 5 5 C 1.50700 * 109.46833 * 169.99922 * 4 2 1 6 6 O 1.21287 * 120.00491 * 0.02562 * 5 4 2 7 7 N 1.34779 * 119.99714 * 180.02562 * 5 4 2 8 8 C 1.39148 * 119.99962 * 174.82515 * 7 5 4 9 9 C 1.38603 * 120.21281 * 338.91618 * 8 7 5 10 10 C 1.38191 * 120.17530 * 179.97438 * 9 8 7 11 11 C 1.39004 * 120.60226 * 0.02562 * 10 9 8 12 12 Cl 1.73594 * 119.79076 * 179.97438 * 11 10 9 13 13 C 1.37547 * 120.41886 * 359.74315 * 11 10 9 14 14 C 1.40739 * 119.81224 * 0.48441 * 13 11 10 15 15 C 1.41069 * 120.29537 * 179.79181 * 14 13 11 16 16 H 1.07994 * 120.00337 * 151.30693 * 15 14 13 17 17 C 1.39949 * 119.99712 * 331.57885 * 15 14 13 18 18 N 1.30862 * 119.99824 * 165.12916 * 17 15 14 19 19 Si 1.86800 * 120.00344 * 345.13586 * 17 15 14 20 20 H 1.48498 * 109.47654 * 95.33913 * 19 17 15 21 21 H 1.48498 * 109.47204 * 215.34146 * 19 17 15 22 22 H 1.48503 * 109.47133 * 335.33920 * 19 17 15 23 23 H 1.09001 * 109.47092 * 296.04838 * 1 2 3 24 24 H 1.09000 * 109.46885 * 56.04871 * 1 2 3 25 25 H 1.08999 * 109.46852 * 176.04811 * 1 2 3 26 26 H 1.08997 * 109.47064 * 183.95945 * 3 2 1 27 27 H 1.09002 * 109.46765 * 303.95541 * 3 2 1 28 28 H 1.09002 * 109.46978 * 63.94992 * 3 2 1 29 29 H 1.09004 * 109.46643 * 50.00580 * 4 2 1 30 30 H 1.08990 * 109.47588 * 290.00206 * 4 2 1 31 31 H 0.97001 * 120.00396 * 354.82378 * 7 5 4 32 32 H 1.08002 * 119.91233 * 359.97236 * 9 8 7 33 33 H 1.07997 * 119.70078 * 180.02562 * 10 9 8 34 34 H 1.08001 * 120.09102 * 180.25907 * 13 11 10 35 35 H 0.97006 * 119.99675 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3715 0.0000 4 6 1.9955 -0.7659 1.1376 5 6 3.4818 -0.9524 0.9728 6 8 4.0470 -0.4922 0.0034 7 7 4.1830 -1.6306 1.9028 8 6 5.5336 -1.8961 1.6990 9 6 6.0634 -1.8740 0.4184 10 6 7.4049 -2.1373 0.2170 11 6 8.2382 -2.4272 1.2911 12 17 9.9202 -2.7554 1.0139 13 6 7.7395 -2.4511 2.5728 14 6 6.3749 -2.1904 2.7976 15 6 5.8517 -2.2165 4.1074 16 1 4.9989 -1.6042 4.3606 17 6 6.4414 -3.0316 5.0802 18 7 6.1589 -2.8498 6.3450 19 14 7.6319 -4.3789 4.5735 20 1 9.0243 -3.8723 4.6724 21 1 7.4662 -5.5496 5.4719 22 1 7.3517 -4.7861 3.1731 23 1 -0.3633 0.4513 0.9233 24 1 -0.3633 0.5739 -0.8525 25 1 -0.3633 -1.0252 -0.0708 26 1 3.0828 1.3433 -0.0710 27 1 1.5898 1.9163 -0.8525 28 1 1.7044 1.8724 0.9233 29 1 1.5090 -1.7406 1.1756 30 1 1.7976 -0.2247 2.0627 31 1 3.7462 -1.9337 2.7141 32 1 5.4259 -1.6505 -0.4243 33 1 7.8097 -2.1176 -0.7841 34 1 8.3926 -2.6729 3.4039 35 1 6.5680 -3.4146 7.0193 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000571418317.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:24:48 Heat of formation + Delta-G solvation = -9.764946 kcal Electronic energy + Delta-G solvation = -19750.139223 eV Core-core repulsion = 16581.091549 eV Total energy + Delta-G solvation = -3169.047674 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -39.97086 -37.97605 -36.50120 -35.64168 -33.83075 -33.74744 -30.66077 -29.55462 -27.60008 -27.49003 -25.29388 -22.91433 -22.02369 -20.64363 -19.66434 -17.70546 -17.15473 -16.66788 -15.79701 -15.53562 -14.95939 -14.56582 -14.45251 -14.39949 -13.62424 -13.44817 -12.92768 -12.70231 -12.57819 -12.33606 -12.05225 -12.02136 -11.70397 -11.61965 -11.50798 -11.09068 -11.04402 -10.79874 -10.52214 -10.00484 -9.87679 -9.42535 -9.35750 -8.91056 -8.31860 -7.85730 -7.14685 -7.09336 -4.68257 2.13697 2.47459 3.01003 3.05957 3.08349 3.20380 3.22738 3.48417 3.85107 4.16637 4.31306 5.05072 5.07019 5.16814 5.27813 5.33400 5.36764 5.61173 5.62110 5.73685 5.95335 6.09715 6.17293 6.44674 6.49029 6.69273 6.85427 6.96106 6.99930 7.13003 7.16641 7.44648 7.47595 7.78980 8.03852 8.13308 8.38815 8.54038 8.78319 9.87109 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.017546 B = 0.005586 C = 0.004411 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1595.403689 B = 5011.657578 C = 6346.244626 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.529 5.529 3 C 0.017 3.983 4 C 0.036 3.964 5 C 0.500 3.500 6 O -0.519 6.519 7 N -0.640 5.640 8 C 0.043 3.957 9 C -0.083 4.083 10 C -0.214 4.214 11 C 0.006 3.994 12 Cl -0.119 7.119 13 C -0.220 4.220 14 C 0.087 3.913 15 C -0.446 4.446 16 H 0.094 0.906 17 C 0.087 3.913 18 N -0.801 5.801 19 Si 0.905 3.095 20 H -0.266 1.266 21 H -0.289 1.289 22 H -0.239 1.239 23 H 0.025 0.975 24 H 0.070 0.930 25 H 0.068 0.932 26 H 0.092 0.908 27 H 0.065 0.935 28 H 0.019 0.981 29 H 0.103 0.897 30 H 0.063 0.937 31 H 0.409 0.591 32 H 0.140 0.860 33 H 0.108 0.892 34 H 0.113 0.887 35 H 0.288 0.712 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.154 1.497 -5.446 9.115 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.253 5.253 3 C -0.130 4.130 4 C -0.095 4.095 5 C 0.287 3.713 6 O -0.396 6.396 7 N -0.283 5.283 8 C -0.051 4.051 9 C -0.104 4.104 10 C -0.234 4.234 11 C -0.020 4.020 12 Cl -0.090 7.090 13 C -0.240 4.240 14 C 0.082 3.918 15 C -0.474 4.474 16 H 0.112 0.888 17 C -0.134 4.134 18 N -0.424 5.424 19 Si 0.732 3.268 20 H -0.192 1.192 21 H -0.217 1.217 22 H -0.162 1.162 23 H 0.043 0.957 24 H 0.089 0.911 25 H 0.087 0.913 26 H 0.110 0.890 27 H 0.084 0.916 28 H 0.038 0.962 29 H 0.121 0.879 30 H 0.081 0.919 31 H 0.245 0.755 32 H 0.158 0.842 33 H 0.127 0.873 34 H 0.130 0.870 35 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -6.542 1.537 -6.289 9.204 hybrid contribution 0.237 -0.342 1.313 1.378 sum -6.305 1.194 -4.976 8.120 Atomic orbital electron populations 1.22418 0.87070 1.02291 1.00541 1.61634 1.07226 1.14762 1.41658 1.22590 1.03412 0.87463 0.99583 1.21985 0.93435 1.00615 0.93469 1.20424 0.88901 0.78606 0.83374 1.90554 1.70529 1.47983 1.30509 1.42988 1.09172 1.53921 1.22171 1.17702 0.82661 1.11542 0.93227 1.21048 0.94564 0.98710 0.96061 1.20226 0.93444 1.13245 0.96505 1.20635 0.82362 1.03868 0.95181 1.98272 1.19553 1.94328 1.96884 1.20637 0.95137 1.14008 0.94242 1.17321 0.89737 0.92428 0.92311 1.19236 1.14411 1.22224 0.91537 0.88843 1.26143 0.95264 0.97910 0.94072 1.69658 1.36903 1.34531 1.01339 0.86380 0.80196 0.79424 0.80799 1.19212 1.21694 1.16215 0.95690 0.91143 0.91302 0.88974 0.91644 0.96225 0.87877 0.91923 0.75472 0.84237 0.87342 0.86959 0.90098 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.24 9.57 60.07 0.57 0.82 16 2 N -0.53 -6.95 4.76 -252.72 -1.20 -8.15 16 3 C 0.02 0.23 9.21 60.07 0.55 0.78 16 4 C 0.04 0.47 5.45 -4.98 -0.03 0.44 16 5 C 0.50 8.66 7.39 -10.98 -0.08 8.58 16 6 O -0.52 -10.46 11.25 5.55 0.06 -10.40 16 7 N -0.64 -11.87 5.15 -9.48 -0.05 -11.92 16 8 C 0.04 0.96 6.51 -83.18 -0.54 0.42 16 9 C -0.08 -1.82 8.75 -39.46 -0.35 -2.16 16 10 C -0.21 -4.58 9.82 -39.31 -0.39 -4.96 16 11 C 0.01 0.14 6.31 -39.55 -0.25 -0.11 16 12 Cl -0.12 -2.32 28.94 -51.86 -1.50 -3.82 16 13 C -0.22 -5.18 6.75 -38.89 -0.26 -5.44 16 14 C 0.09 2.06 5.19 -106.65 -0.55 1.50 16 15 C -0.45 -10.82 8.88 -37.87 -0.34 -11.15 16 16 H 0.09 2.28 7.32 -52.49 -0.38 1.90 16 17 C 0.09 2.10 5.45 -17.32 -0.09 2.00 16 18 N -0.80 -19.76 13.93 55.55 0.77 -18.98 16 19 Si 0.91 19.86 24.39 -169.99 -4.15 15.72 16 20 H -0.27 -5.82 6.74 56.52 0.38 -5.44 16 21 H -0.29 -6.12 7.11 56.52 0.40 -5.72 16 22 H -0.24 -5.40 6.59 56.52 0.37 -5.03 16 23 H 0.02 0.22 8.14 -51.93 -0.42 -0.20 16 24 H 0.07 0.61 8.12 -51.93 -0.42 0.19 16 25 H 0.07 0.60 8.12 -51.93 -0.42 0.17 16 26 H 0.09 1.45 5.88 -51.93 -0.31 1.15 16 27 H 0.06 0.74 8.12 -51.93 -0.42 0.32 16 28 H 0.02 0.23 8.14 -51.93 -0.42 -0.19 16 29 H 0.10 1.13 8.06 -51.93 -0.42 0.71 16 30 H 0.06 0.73 8.12 -51.93 -0.42 0.31 16 31 H 0.41 6.87 7.44 -40.82 -0.30 6.56 16 32 H 0.14 3.02 5.49 -52.49 -0.29 2.73 16 33 H 0.11 2.11 8.06 -52.49 -0.42 1.68 16 34 H 0.11 2.67 4.29 -52.49 -0.23 2.45 16 35 H 0.29 6.50 8.30 -40.82 -0.34 6.16 16 LS Contribution 301.74 15.07 4.55 4.55 Total: -1.00 -27.22 301.74 -7.33 -34.54 By element: Atomic # 1 Polarization: 11.82 SS G_CDS: -4.06 Total: 7.76 kcal Atomic # 6 Polarization: -7.55 SS G_CDS: -1.75 Total: -9.30 kcal Atomic # 7 Polarization: -38.57 SS G_CDS: -0.48 Total: -39.05 kcal Atomic # 8 Polarization: -10.46 SS G_CDS: 0.06 Total: -10.40 kcal Atomic # 14 Polarization: 19.86 SS G_CDS: -4.15 Total: 15.72 kcal Atomic # 17 Polarization: -2.32 SS G_CDS: -1.50 Total: -3.82 kcal Total LS contribution 4.55 Total: 4.55 kcal Total: -27.22 -7.33 -34.54 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000571418317.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.779 kcal (2) G-P(sol) polarization free energy of solvation -27.217 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.437 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.328 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.544 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.765 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds