Wall clock time and date at job start Tue Mar 31 2020 06:12:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 H 1.09003 * 109.46949 * 2 1 4 4 C 1.50694 * 109.47174 * 120.00530 * 2 1 3 5 5 H 1.08000 * 120.00563 * 119.99919 * 4 2 1 6 6 C 1.37885 * 119.99902 * 300.00082 * 4 2 1 7 7 N 1.31516 * 119.99913 * 359.97438 * 6 4 2 8 8 Si 1.86798 * 119.99766 * 179.97438 * 6 4 2 9 9 H 1.48500 * 109.47353 * 269.99586 * 8 6 4 10 10 H 1.48501 * 109.47293 * 30.00037 * 8 6 4 11 11 H 1.48504 * 109.46680 * 149.99835 * 8 6 4 12 12 N 1.46497 * 109.47145 * 240.00568 * 2 1 3 13 13 C 1.34777 * 120.00015 * 84.99707 * 12 2 1 14 14 O 1.21279 * 120.00228 * 359.97438 * 13 12 2 15 15 C 1.50709 * 119.99692 * 180.02562 * 13 12 2 16 16 N 1.46501 * 109.46866 * 180.02562 * 15 13 12 17 17 C 1.39749 * 119.99879 * 179.97438 * 16 15 13 18 18 C 1.38871 * 120.07878 * 0.02562 * 17 16 15 19 19 C 1.38124 * 119.93938 * 180.02562 * 18 17 16 20 20 C 1.38287 * 120.09225 * 0.02562 * 19 18 17 21 21 C 1.38272 * 120.15652 * 359.97438 * 20 19 18 22 22 C 1.38210 * 120.06425 * 359.71281 * 21 20 19 23 23 Cl 1.73593 * 120.05242 * 180.30189 * 22 21 20 24 24 H 1.08997 * 109.47359 * 300.00009 * 1 2 3 25 25 H 1.09007 * 109.47356 * 59.99532 * 1 2 3 26 26 H 1.09000 * 109.47156 * 179.97438 * 1 2 3 27 27 H 0.97001 * 119.99646 * 179.97438 * 7 6 4 28 28 H 0.97005 * 119.99880 * 265.00058 * 12 2 1 29 29 H 1.09003 * 109.46726 * 300.00059 * 15 13 12 30 30 H 1.08992 * 109.47335 * 60.00408 * 15 13 12 31 31 H 0.97004 * 119.99899 * 0.02562 * 16 15 13 32 32 H 1.08004 * 120.03561 * 359.97438 * 18 17 16 33 33 H 1.08001 * 119.95136 * 179.97438 * 19 18 17 34 34 H 1.08004 * 119.91927 * 179.97438 * 20 19 18 35 35 H 1.08005 * 119.96933 * 180.02562 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0323 -0.7105 1.2303 5 1 2.6532 -1.5886 1.1313 6 6 1.6992 -0.2395 2.4827 7 7 0.9435 0.8301 2.6034 8 14 2.3213 -1.1207 4.0078 9 1 1.3427 -2.1620 4.4117 10 1 3.6293 -1.7586 3.7120 11 1 2.4865 -0.1417 5.1122 12 7 2.0183 -0.6905 -1.1962 13 6 2.1470 -0.0180 -2.3571 14 8 1.8581 1.1586 -2.4117 15 6 2.6488 -0.7286 -3.5878 16 7 2.6987 0.2131 -4.7090 17 6 3.1359 -0.2179 -5.9645 18 6 3.5229 -1.5385 -6.1512 19 6 3.9550 -1.9612 -7.3931 20 6 4.0033 -1.0712 -8.4504 21 6 3.6189 0.2445 -8.2689 22 6 3.1793 0.6729 -7.0305 23 17 2.6894 2.3229 -6.8050 24 1 -0.3634 0.5138 0.8899 25 1 -0.3634 0.5139 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 0.7089 1.1611 3.4845 28 1 2.2490 -1.6317 -1.1527 29 1 3.6480 -1.1211 -3.3986 30 1 1.9760 -1.5503 -3.8327 31 1 2.4290 1.1358 -4.5798 32 1 3.4868 -2.2342 -5.3258 33 1 4.2564 -2.9881 -7.5384 34 1 4.3420 -1.4047 -9.4202 35 1 3.6574 0.9370 -9.0969 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000604573479.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:12:59 Heat of formation + Delta-G solvation = -23.569269 kcal Electronic energy + Delta-G solvation = -18986.834415 eV Core-core repulsion = 15817.188140 eV Total energy + Delta-G solvation = -3169.646274 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -39.80183 -38.88882 -36.39719 -35.56757 -34.70104 -32.51104 -30.83056 -30.27184 -28.88404 -26.32251 -25.30580 -22.91240 -21.98717 -20.95592 -19.59878 -18.19316 -17.13924 -16.36653 -16.00270 -15.50005 -15.33479 -15.12575 -14.38563 -14.20865 -13.89718 -13.85413 -13.55396 -12.84176 -12.71220 -12.43052 -12.03012 -11.75198 -11.53048 -11.39226 -11.17316 -11.00140 -10.85855 -10.81922 -10.40329 -10.29812 -10.28220 -9.27246 -9.12199 -8.92014 -8.62920 -8.06677 -7.51250 -6.18358 -4.28322 1.12348 1.40581 2.18888 3.15505 3.19487 3.20820 3.28114 3.30311 3.63434 4.01881 4.31857 4.66418 4.84854 5.11573 5.14134 5.20784 5.25075 5.34216 5.38732 5.45103 5.70310 5.97950 6.14549 6.38796 6.60064 6.74304 6.87737 7.05776 7.09912 7.31557 7.45919 7.60879 7.69027 7.82777 8.07278 8.50725 8.67731 8.94271 9.39144 10.87626 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.032182 B = 0.003269 C = 0.003054 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 869.834173 B = 8562.842014 C = 9166.176428 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.264 3.736 3 H 0.050 0.950 4 C -0.536 4.536 5 H 0.062 0.938 6 C 0.066 3.934 7 N -0.883 5.883 8 Si 0.903 3.097 9 H -0.279 1.279 10 H -0.273 1.273 11 H -0.285 1.285 12 N -0.702 5.702 13 C 0.495 3.505 14 O -0.550 6.550 15 C 0.100 3.900 16 N -0.724 5.724 17 C 0.236 3.764 18 C -0.194 4.194 19 C -0.065 4.065 20 C -0.178 4.178 21 C -0.061 4.061 22 C -0.118 4.118 23 Cl -0.072 7.072 24 H 0.091 0.909 25 H 0.014 0.986 26 H 0.027 0.973 27 H 0.265 0.735 28 H 0.391 0.609 29 H 0.088 0.912 30 H 0.088 0.912 31 H 0.416 0.584 32 H 0.130 0.870 33 H 0.125 0.875 34 H 0.125 0.875 35 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.083 -5.741 -18.844 20.344 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C 0.163 3.837 3 H 0.067 0.933 4 C -0.575 4.575 5 H 0.080 0.920 6 C -0.137 4.137 7 N -0.520 5.520 8 Si 0.730 3.270 9 H -0.205 1.205 10 H -0.198 1.198 11 H -0.210 1.210 12 N -0.350 5.350 13 C 0.279 3.721 14 O -0.429 6.429 15 C -0.029 4.029 16 N -0.356 5.356 17 C 0.129 3.871 18 C -0.218 4.218 19 C -0.084 4.084 20 C -0.198 4.198 21 C -0.080 4.080 22 C -0.149 4.149 23 Cl -0.043 7.043 24 H 0.110 0.890 25 H 0.034 0.966 26 H 0.046 0.954 27 H 0.075 0.925 28 H 0.224 0.776 29 H 0.106 0.894 30 H 0.106 0.894 31 H 0.257 0.743 32 H 0.148 0.852 33 H 0.143 0.857 34 H 0.143 0.857 35 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 4.713 -4.732 -18.467 19.637 hybrid contribution 0.231 -0.457 1.008 1.131 sum 4.944 -5.189 -17.459 18.873 Atomic orbital electron populations 1.22086 0.98307 0.99211 1.01009 1.18795 0.91117 0.94028 0.79761 0.93257 1.21199 1.32697 1.13336 0.90247 0.91969 1.24899 0.94764 0.94919 0.99128 1.69901 1.35743 1.22339 1.24005 0.86423 0.79173 0.79266 0.82094 1.20498 1.19810 1.21033 1.46479 1.64550 1.13669 1.10281 1.20268 0.79203 0.87717 0.84922 1.90667 1.51443 1.16018 1.84733 1.21197 1.02386 0.92923 0.86361 1.44649 1.71123 1.14179 1.05634 1.17572 0.92427 0.92409 0.84718 1.20659 1.08350 0.93703 0.99050 1.20975 0.95886 0.99424 0.92066 1.20811 1.06477 0.93029 0.99533 1.20798 0.96202 0.96347 0.94699 1.20379 1.13107 0.86181 0.95270 1.98358 1.90541 1.18308 1.97130 0.89031 0.96648 0.95368 0.92485 0.77628 0.89364 0.89416 0.74348 0.85166 0.85673 0.85749 0.85299 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.60 9.26 37.16 0.34 -3.26 16 2 C 0.26 6.55 2.56 -69.09 -0.18 6.37 16 3 H 0.05 1.42 7.58 -51.93 -0.39 1.03 16 4 C -0.54 -13.86 8.73 -34.44 -0.30 -14.16 16 5 H 0.06 1.52 7.74 -52.49 -0.41 1.12 16 6 C 0.07 1.76 5.30 -17.82 -0.09 1.66 16 7 N -0.88 -24.55 11.32 55.43 0.63 -23.92 16 8 Si 0.90 20.27 29.54 -169.99 -5.02 15.25 16 9 H -0.28 -6.18 7.11 56.52 0.40 -5.78 16 10 H -0.27 -6.02 7.11 56.52 0.40 -5.62 16 11 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 12 N -0.70 -13.76 5.07 -54.93 -0.28 -14.04 16 13 C 0.50 9.30 7.86 -10.98 -0.09 9.21 16 14 O -0.55 -12.62 15.33 5.56 0.09 -12.53 16 15 C 0.10 1.35 5.39 -5.19 -0.03 1.32 16 16 N -0.72 -10.52 5.66 -59.77 -0.34 -10.86 16 17 C 0.24 3.05 6.65 -83.73 -0.56 2.50 16 18 C -0.19 -2.08 9.31 -39.39 -0.37 -2.45 16 19 C -0.06 -0.59 10.04 -39.61 -0.40 -0.99 16 20 C -0.18 -1.61 10.04 -39.55 -0.40 -2.00 16 21 C -0.06 -0.63 9.82 -39.58 -0.39 -1.02 16 22 C -0.12 -1.48 6.34 -39.31 -0.25 -1.73 16 23 Cl -0.07 -0.94 27.60 -51.86 -1.43 -2.37 16 24 H 0.09 2.44 6.07 -51.93 -0.32 2.12 16 25 H 0.01 0.35 8.14 -51.93 -0.42 -0.07 16 26 H 0.03 0.63 8.14 -51.93 -0.42 0.21 16 27 H 0.27 7.00 8.31 -40.82 -0.34 6.66 16 28 H 0.39 6.40 8.54 -40.82 -0.35 6.05 16 29 H 0.09 1.01 7.95 -51.93 -0.41 0.60 16 30 H 0.09 0.99 7.95 -51.93 -0.41 0.58 16 31 H 0.42 6.86 6.11 -40.82 -0.25 6.61 16 32 H 0.13 1.18 6.74 -52.48 -0.35 0.83 16 33 H 0.13 0.81 8.06 -52.49 -0.42 0.39 16 34 H 0.12 0.82 8.06 -52.48 -0.42 0.40 16 35 H 0.13 1.09 8.06 -52.48 -0.42 0.67 16 LS Contribution 314.59 15.07 4.74 4.74 Total: -1.00 -30.06 314.59 -8.45 -38.52 By element: Atomic # 1 Polarization: 13.90 SS G_CDS: -4.14 Total: 9.76 kcal Atomic # 6 Polarization: -1.85 SS G_CDS: -2.70 Total: -4.55 kcal Atomic # 7 Polarization: -48.83 SS G_CDS: 0.01 Total: -48.82 kcal Atomic # 8 Polarization: -12.62 SS G_CDS: 0.09 Total: -12.53 kcal Atomic # 14 Polarization: 20.27 SS G_CDS: -5.02 Total: 15.25 kcal Atomic # 17 Polarization: -0.94 SS G_CDS: -1.43 Total: -2.37 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -30.06 -8.45 -38.52 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000604573479.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.948 kcal (2) G-P(sol) polarization free energy of solvation -30.063 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.115 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.455 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.518 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.569 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds