Wall clock time and date at job start Tue Mar 31 2020 06:13:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 N 1.46504 * 109.47108 * 2 1 4 4 C 1.35680 * 125.68479 * 266.12866 * 3 2 1 5 5 C 1.35559 * 108.86168 * 179.72669 * 4 3 2 6 6 Cl 1.73599 * 126.06814 * 180.26776 * 5 4 3 7 7 C 1.39857 * 107.86501 * 0.43673 * 5 4 3 8 8 C 1.37664 * 125.67471 * 86.13133 * 3 2 1 9 9 C 1.46536 * 126.23454 * 359.97438 * 8 3 2 10 10 O 1.21737 * 119.99788 * 5.86352 * 9 8 3 11 11 N 1.34777 * 120.00201 * 185.86383 * 9 8 3 12 12 C 1.36869 * 119.99905 * 184.39350 * 11 9 8 13 13 H 1.07998 * 120.00390 * 327.72254 * 12 11 9 14 14 C 1.39011 * 120.00220 * 147.72789 * 12 11 9 15 15 N 1.31393 * 120.00705 * 165.71213 * 14 12 11 16 16 Si 1.86804 * 119.99775 * 345.71045 * 14 12 11 17 17 H 1.48502 * 109.46975 * 85.25243 * 16 14 12 18 18 H 1.48493 * 109.47332 * 205.25451 * 16 14 12 19 19 H 1.48502 * 109.47087 * 325.25415 * 16 14 12 20 20 C 1.46503 * 119.99666 * 4.39269 * 11 9 8 21 21 C 1.52994 * 117.49611 * 133.61788 * 20 11 9 22 22 C 1.52996 * 117.50011 * 64.99415 * 20 11 9 23 23 H 1.08993 * 109.47379 * 185.06157 * 1 2 3 24 24 H 1.08999 * 109.47119 * 305.06121 * 1 2 3 25 25 H 1.09003 * 109.47169 * 65.05709 * 1 2 3 26 26 H 1.09006 * 109.46981 * 240.00514 * 2 1 3 27 27 H 1.08994 * 109.47104 * 120.00467 * 2 1 3 28 28 H 1.07997 * 125.56705 * 359.97438 * 4 3 2 29 29 H 1.07999 * 126.45361 * 179.83254 * 7 5 4 30 30 H 0.96995 * 120.00320 * 179.97438 * 15 14 12 31 31 H 1.08999 * 115.54510 * 279.31655 * 20 11 9 32 32 H 1.09005 * 117.50431 * 359.97438 * 21 20 11 33 33 H 1.09000 * 117.49814 * 145.01642 * 21 20 11 34 34 H 1.09000 * 117.49795 * 214.97852 * 22 20 11 35 35 H 1.08994 * 117.50110 * 359.97438 * 22 20 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 6 2.3523 2.1026 -1.0995 5 6 2.7541 3.3369 -0.7085 6 17 3.2738 4.6215 -1.7541 7 6 2.6794 3.3903 0.6870 8 6 2.2148 2.1633 1.1158 9 6 1.9740 1.7658 2.5055 10 8 1.6635 0.6177 2.7650 11 7 2.0964 2.6713 3.4963 12 6 1.9600 2.2807 4.8009 13 1 1.2876 1.4750 5.0560 14 6 2.6871 2.9210 5.7978 15 7 2.3622 2.7519 7.0597 16 14 4.1261 4.0221 5.3435 17 1 3.6275 5.3866 5.0358 18 1 5.0778 4.0877 6.4815 19 1 4.8170 3.4671 4.1518 20 6 2.3754 4.0735 3.1767 21 6 1.5406 5.1398 3.8886 22 6 1.3054 4.8486 2.4051 23 1 -0.3634 -1.0236 0.0907 24 1 -0.3633 0.5903 0.8412 25 1 -0.3634 0.4334 -0.9318 26 1 1.8933 -0.5138 -0.8901 27 1 1.8933 -0.5139 0.8899 28 1 2.3021 1.7522 -2.1198 29 1 2.9330 4.2343 1.3114 30 1 2.8697 3.1984 7.7552 31 1 3.4184 4.3089 2.9649 32 1 0.7835 4.7981 4.5945 33 1 2.0344 6.0770 4.1454 34 1 1.6445 5.5942 1.6859 35 1 0.3942 4.3152 2.1349 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000706771667.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:13:58 Heat of formation + Delta-G solvation = 65.377537 kcal Electronic energy + Delta-G solvation = -20767.384192 eV Core-core repulsion = 17601.594941 eV Total energy + Delta-G solvation = -3165.789251 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.18590 -38.78447 -36.64872 -36.12228 -33.73512 -33.24032 -31.58929 -29.27301 -28.84446 -25.14231 -23.53103 -22.54625 -22.18042 -21.16455 -20.10860 -18.68148 -17.26129 -16.77622 -15.95669 -15.45107 -14.97966 -14.48813 -14.31356 -13.93565 -13.67475 -13.43488 -13.27158 -12.78071 -12.54434 -12.40446 -12.27225 -11.91829 -11.72374 -11.38086 -11.15850 -11.05483 -10.92872 -10.74810 -10.56195 -9.98051 -9.81491 -9.55582 -9.15587 -8.67750 -8.28343 -7.94020 -7.80873 -6.43186 -4.01610 1.95762 2.38859 2.82104 3.08757 3.21069 3.24493 3.25717 4.05945 4.17516 4.25621 4.28300 4.89071 4.94110 5.11100 5.21159 5.29915 5.34894 5.43741 5.46402 5.57649 5.65304 5.76159 5.90790 6.05698 6.16673 6.20171 6.26643 6.33572 6.50109 6.72661 6.85538 7.19441 7.39561 7.51898 8.14327 8.43515 8.84709 9.24824 9.65936 10.67430 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.017538 B = 0.007536 C = 0.005865 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1596.165043 B = 3714.398325 C = 4773.113552 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C 0.098 3.902 3 N -0.406 5.406 4 C 0.008 3.992 5 C -0.122 4.122 6 Cl -0.068 7.068 7 C -0.163 4.163 8 C 0.004 3.996 9 C 0.527 3.473 10 O -0.572 6.572 11 N -0.416 5.416 12 C -0.312 4.312 13 H 0.113 0.887 14 C 0.068 3.932 15 N -0.864 5.864 16 Si 0.877 3.123 17 H -0.258 1.258 18 H -0.292 1.292 19 H -0.269 1.269 20 C 0.032 3.968 21 C -0.162 4.162 22 C -0.173 4.173 23 H 0.072 0.928 24 H 0.068 0.932 25 H 0.053 0.947 26 H 0.083 0.917 27 H 0.114 0.886 28 H 0.167 0.833 29 H 0.166 0.834 30 H 0.276 0.724 31 H 0.108 0.892 32 H 0.112 0.888 33 H 0.097 0.903 34 H 0.099 0.901 35 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.358 2.910 -14.728 15.017 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.218 4.218 2 C -0.023 4.023 3 N -0.079 5.079 4 C -0.128 4.128 5 C -0.156 4.156 6 Cl -0.040 7.040 7 C -0.189 4.189 8 C -0.111 4.111 9 C 0.317 3.683 10 O -0.457 6.457 11 N -0.135 5.135 12 C -0.439 4.439 13 H 0.130 0.870 14 C -0.139 4.139 15 N -0.500 5.500 16 Si 0.705 3.295 17 H -0.184 1.184 18 H -0.219 1.219 19 H -0.194 1.194 20 C -0.073 4.073 21 C -0.199 4.199 22 C -0.211 4.211 23 H 0.091 0.909 24 H 0.087 0.913 25 H 0.072 0.928 26 H 0.101 0.899 27 H 0.132 0.868 28 H 0.184 0.816 29 H 0.184 0.816 30 H 0.086 0.914 31 H 0.125 0.875 32 H 0.130 0.870 33 H 0.115 0.885 34 H 0.117 0.883 35 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -0.584 2.100 -14.406 14.570 hybrid contribution 0.963 0.757 -0.298 1.261 sum 0.379 2.858 -14.704 14.984 Atomic orbital electron populations 1.22045 0.94224 1.03024 1.02505 1.22057 0.95868 0.79371 1.04972 1.43991 1.47366 1.11816 1.04771 1.21473 1.07757 0.91613 0.91953 1.19911 1.13564 0.90626 0.91471 1.98281 1.89937 1.49531 1.66204 1.22127 1.06014 0.98021 0.92698 1.20589 1.10241 0.91365 0.88890 1.16679 0.84115 0.85097 0.82447 1.90647 1.52677 1.18722 1.83630 1.42864 1.61762 1.02891 1.05988 1.19089 1.25309 1.20733 0.78762 0.86957 1.25274 0.96989 0.96969 0.94639 1.69674 1.38788 1.41980 0.99586 0.87019 0.82698 0.81722 0.78083 1.18369 1.21884 1.19423 1.22033 0.95582 0.83461 1.06218 1.23454 1.02898 0.98150 0.95439 1.23458 1.00502 1.02423 0.94713 0.90879 0.91273 0.92769 0.89885 0.86816 0.81567 0.81647 0.91394 0.87451 0.86969 0.88482 0.88268 0.88524 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.09 10.24 37.16 0.38 -1.71 16 2 C 0.10 1.38 6.23 -4.04 -0.03 1.36 16 3 N -0.41 -6.65 2.77 -112.80 -0.31 -6.96 16 4 C 0.01 0.11 11.36 -16.81 -0.19 -0.08 16 5 C -0.12 -1.89 6.66 -39.93 -0.27 -2.16 16 6 Cl -0.07 -0.91 29.30 -51.86 -1.52 -2.43 16 7 C -0.16 -2.87 8.05 -39.05 -0.31 -3.19 16 8 C 0.00 0.07 6.65 -81.98 -0.54 -0.47 16 9 C 0.53 12.43 7.51 -12.92 -0.10 12.33 16 10 O -0.57 -14.84 14.51 5.16 0.07 -14.76 16 11 N -0.42 -10.02 2.64 -109.25 -0.29 -10.31 16 12 C -0.31 -8.61 9.10 -15.02 -0.14 -8.74 16 13 H 0.11 3.49 7.76 -52.49 -0.41 3.08 16 14 C 0.07 1.83 5.10 -17.45 -0.09 1.74 16 15 N -0.86 -24.36 13.96 55.50 0.77 -23.58 16 16 Si 0.88 20.12 23.78 -169.99 -4.04 16.08 16 17 H -0.26 -5.28 5.28 56.52 0.30 -4.98 16 18 H -0.29 -6.80 7.11 56.52 0.40 -6.39 16 19 H -0.27 -6.26 6.74 56.52 0.38 -5.88 16 20 C 0.03 0.64 1.42 -67.93 -0.10 0.55 16 21 C -0.16 -2.97 7.75 -26.73 -0.21 -3.17 16 22 C -0.17 -2.86 7.45 -26.73 -0.20 -3.06 16 23 H 0.07 0.81 8.14 -51.93 -0.42 0.39 16 24 H 0.07 1.12 8.14 -51.93 -0.42 0.70 16 25 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 26 H 0.08 0.88 8.13 -51.93 -0.42 0.45 16 27 H 0.11 1.91 6.43 -51.93 -0.33 1.57 16 28 H 0.17 1.80 8.06 -52.49 -0.42 1.37 16 29 H 0.17 2.84 3.45 -52.49 -0.18 2.65 16 30 H 0.28 7.23 8.31 -40.82 -0.34 6.89 16 31 H 0.11 2.12 5.11 -51.93 -0.27 1.86 16 32 H 0.11 2.27 7.95 -51.93 -0.41 1.86 16 33 H 0.10 1.59 7.18 -51.93 -0.37 1.22 16 34 H 0.10 1.38 7.62 -51.93 -0.40 0.98 16 35 H 0.10 1.67 8.14 -51.93 -0.42 1.25 16 LS Contribution 296.16 15.07 4.46 4.46 Total: -1.00 -30.09 296.16 -6.80 -36.89 By element: Atomic # 1 Polarization: 11.38 SS G_CDS: -4.16 Total: 7.22 kcal Atomic # 6 Polarization: -4.83 SS G_CDS: -1.79 Total: -6.61 kcal Atomic # 7 Polarization: -41.02 SS G_CDS: 0.17 Total: -40.85 kcal Atomic # 8 Polarization: -14.84 SS G_CDS: 0.07 Total: -14.76 kcal Atomic # 14 Polarization: 20.12 SS G_CDS: -4.04 Total: 16.08 kcal Atomic # 17 Polarization: -0.91 SS G_CDS: -1.52 Total: -2.43 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -30.09 -6.80 -36.89 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000706771667.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 102.265 kcal (2) G-P(sol) polarization free energy of solvation -30.088 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.176 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.799 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.887 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.378 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds