Wall clock time and date at job start Tue Mar 31 2020 05:12:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.38352 * 120.32531 * 2 1 4 4 N 1.31917 * 121.10129 * 179.97438 * 3 2 1 5 5 C 1.31826 * 121.86568 * 359.97438 * 4 3 2 6 6 Cl 1.73594 * 119.74076 * 180.02562 * 5 4 3 7 7 C 1.39713 * 120.52060 * 0.03094 * 5 4 3 8 8 C 1.47761 * 120.56753 * 179.97438 * 7 5 4 9 9 O 1.21558 * 120.00201 * 359.97438 * 8 7 5 10 10 N 1.34778 * 119.99671 * 179.97438 * 8 7 5 11 11 C 1.46507 * 119.99683 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.47062 * 179.97438 * 11 10 8 13 13 C 1.53002 * 109.47001 * 179.97438 * 12 11 10 14 14 C 1.50696 * 109.47102 * 179.97438 * 13 12 11 15 15 H 1.08006 * 119.99773 * 0.02562 * 14 13 12 16 16 C 1.37871 * 120.00090 * 180.02562 * 14 13 12 17 17 N 1.31510 * 119.99997 * 0.02562 * 16 14 13 18 18 Si 1.86808 * 120.00139 * 180.02562 * 16 14 13 19 19 H 1.48497 * 109.46812 * 90.00099 * 18 16 14 20 20 H 1.48499 * 109.46987 * 210.00299 * 18 16 14 21 21 H 1.48498 * 109.46869 * 330.00083 * 18 16 14 22 22 C 1.38345 * 120.33024 * 179.72135 * 2 1 3 23 23 H 1.09001 * 109.46953 * 89.99825 * 1 2 3 24 24 H 1.09000 * 109.47318 * 209.99423 * 1 2 3 25 25 H 1.09000 * 109.47161 * 330.00054 * 1 2 3 26 26 H 1.07994 * 119.45308 * 0.02562 * 3 2 1 27 27 H 0.96996 * 120.00477 * 359.97438 * 10 8 7 28 28 H 1.09003 * 109.46679 * 299.98995 * 11 10 8 29 29 H 1.08994 * 109.47380 * 59.98846 * 11 10 8 30 30 H 1.08994 * 109.46992 * 299.99529 * 12 11 10 31 31 H 1.08997 * 109.46834 * 59.99740 * 12 11 10 32 32 H 1.08994 * 109.47344 * 299.99902 * 13 12 11 33 33 H 1.09003 * 109.46778 * 59.99807 * 13 12 11 34 34 H 0.97002 * 120.00461 * 180.02562 * 17 16 14 35 35 H 1.08010 * 120.84604 * 359.97438 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2056 1.1942 0.0000 4 7 3.5247 1.2121 0.0005 5 6 4.2357 0.1020 0.0015 6 17 5.9694 0.1899 0.0028 7 6 3.6050 -1.1446 0.0015 8 6 4.4009 -2.3895 0.0021 9 8 5.6153 -2.3345 0.0021 10 7 3.7805 -3.5860 0.0025 11 6 4.5697 -4.8203 0.0037 12 6 3.6291 -6.0271 0.0046 13 6 4.4533 -7.3161 0.0052 14 6 3.5269 -8.5047 0.0067 15 1 2.4572 -8.3555 0.0069 16 6 4.0449 -9.7824 0.0080 17 7 5.3474 -9.9639 0.0084 18 14 2.8965 -11.2558 0.0093 19 1 2.5924 -11.6475 -1.3905 20 1 3.5484 -12.3909 0.7105 21 1 1.6358 -10.9001 0.7088 22 6 2.2057 -1.1941 0.0058 23 1 -0.3633 0.0000 -1.0277 24 1 -0.3634 -0.8900 0.5137 25 1 -0.3633 0.8900 0.5138 26 1 1.6620 2.1274 0.0004 27 1 2.8115 -3.6299 0.0028 28 1 5.1986 -4.8502 -0.8861 29 1 5.1981 -4.8490 0.8938 30 1 3.0005 -5.9970 0.8945 31 1 3.0006 -5.9984 -0.8854 32 1 5.0817 -7.3460 -0.8849 33 1 5.0822 -7.3448 0.8950 34 1 5.7119 -10.8629 0.0089 35 1 1.6849 -2.1403 0.0108 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000878731067.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:12:08 Heat of formation + Delta-G solvation = -21.133451 kcal Electronic energy + Delta-G solvation = -18707.867066 eV Core-core repulsion = 15538.326416 eV Total energy + Delta-G solvation = -3169.540649 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.088 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -40.95684 -39.10801 -36.74324 -35.49308 -34.08589 -33.41484 -32.56748 -31.00910 -27.62919 -26.93511 -24.95003 -23.55609 -22.36016 -20.86891 -20.13080 -18.04047 -17.38705 -17.03320 -16.32617 -15.62760 -15.34524 -14.86665 -14.50648 -14.41590 -14.19888 -13.85549 -13.50269 -13.40989 -13.06944 -12.51111 -12.31980 -11.88898 -11.79279 -11.62432 -11.34555 -10.93596 -10.78342 -10.61768 -10.35525 -10.28705 -9.91675 -9.69703 -9.34814 -9.18173 -9.14755 -8.83672 -8.40160 -6.04595 -4.08046 0.20000 0.62564 1.68169 2.69238 3.11788 3.28627 3.35264 3.37673 3.43082 4.06147 4.17459 4.27672 4.40228 4.42699 4.58727 4.89469 5.11442 5.13489 5.29229 5.31259 5.45160 5.63454 5.66874 5.72030 5.97663 6.10302 6.36588 6.53865 6.74882 6.94341 7.24146 7.54773 7.60003 7.72211 7.93688 8.21599 8.34713 8.98558 9.56379 11.06653 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.024684 B = 0.003149 C = 0.002801 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1134.067576 B = 8890.882546 C = 9993.899045 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.143 4.143 3 C 0.135 3.865 4 N -0.480 5.480 5 C 0.213 3.787 6 Cl 0.011 6.989 7 C -0.162 4.162 8 C 0.550 3.450 9 O -0.513 6.513 10 N -0.718 5.718 11 C 0.117 3.883 12 C -0.121 4.121 13 C 0.024 3.976 14 C -0.524 4.524 15 H 0.055 0.945 16 C 0.057 3.943 17 N -0.893 5.893 18 Si 0.893 3.107 19 H -0.280 1.280 20 H -0.286 1.286 21 H -0.274 1.274 22 C -0.035 4.035 23 H 0.078 0.922 24 H 0.074 0.926 25 H 0.074 0.926 26 H 0.169 0.831 27 H 0.395 0.605 28 H 0.068 0.932 29 H 0.068 0.932 30 H 0.054 0.946 31 H 0.054 0.946 32 H 0.019 0.981 33 H 0.020 0.980 34 H 0.261 0.739 35 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.962 22.360 -0.026 24.479 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.145 4.145 3 C -0.022 4.022 4 N -0.190 5.190 5 C 0.048 3.952 6 Cl 0.040 6.960 7 C -0.169 4.169 8 C 0.334 3.666 9 O -0.389 6.389 10 N -0.370 5.370 11 C -0.005 4.005 12 C -0.159 4.159 13 C -0.014 4.014 14 C -0.562 4.562 15 H 0.073 0.927 16 C -0.144 4.144 17 N -0.532 5.532 18 Si 0.721 3.279 19 H -0.206 1.206 20 H -0.212 1.212 21 H -0.199 1.199 22 C -0.061 4.061 23 H 0.097 0.903 24 H 0.093 0.907 25 H 0.093 0.907 26 H 0.186 0.814 27 H 0.230 0.770 28 H 0.086 0.914 29 H 0.086 0.914 30 H 0.073 0.927 31 H 0.073 0.927 32 H 0.038 0.962 33 H 0.038 0.962 34 H 0.071 0.929 35 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -8.306 23.033 -0.019 24.485 hybrid contribution -1.340 -1.663 -0.015 2.136 sum -9.646 21.371 -0.034 23.447 Atomic orbital electron populations 1.20761 0.89018 1.03799 1.03209 1.20969 0.98376 0.93562 1.01643 1.22827 0.88291 0.98158 0.92949 1.67197 1.08340 1.29884 1.13573 1.21864 0.89287 0.88472 0.95548 1.98467 1.03717 1.98341 1.95470 1.20764 0.94367 0.94560 1.07186 1.17848 0.87599 0.83048 0.78086 1.90880 1.12805 1.86817 1.48384 1.46114 1.10453 1.05980 1.74416 1.21718 0.94706 0.81700 1.02385 1.21902 0.98350 0.94786 1.00884 1.19027 0.95113 0.89500 0.97737 1.21189 0.92976 0.90923 1.51096 0.92656 1.25028 0.95035 0.99133 0.95241 1.69960 1.10858 1.21950 1.50432 0.86582 0.80867 0.82367 0.78105 1.20646 1.21191 1.19890 1.21740 0.91903 0.99323 0.93174 0.90313 0.90673 0.90699 0.81421 0.77004 0.91380 0.91385 0.92685 0.92692 0.96217 0.96208 0.92883 0.83338 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.44 10.03 36.01 0.36 -0.08 16 2 C -0.14 -1.04 5.89 -104.54 -0.62 -1.65 16 3 C 0.14 1.11 10.85 -17.47 -0.19 0.92 16 4 N -0.48 -5.64 10.33 -10.02 -0.10 -5.75 16 5 C 0.21 2.84 7.31 -17.00 -0.12 2.71 16 6 Cl 0.01 0.16 26.20 -51.86 -1.36 -1.20 16 7 C -0.16 -2.01 5.89 -104.79 -0.62 -2.63 16 8 C 0.55 8.23 7.77 -12.37 -0.10 8.13 16 9 O -0.51 -9.36 14.00 5.32 0.07 -9.29 16 10 N -0.72 -9.88 5.51 -61.27 -0.34 -10.21 16 11 C 0.12 1.98 5.67 -4.04 -0.02 1.96 16 12 C -0.12 -2.27 5.27 -26.73 -0.14 -2.41 16 13 C 0.02 0.59 4.97 -27.88 -0.14 0.45 16 14 C -0.52 -14.36 9.11 -34.44 -0.31 -14.67 16 15 H 0.06 1.45 7.74 -52.48 -0.41 1.05 16 16 C 0.06 1.61 5.46 -17.82 -0.10 1.51 16 17 N -0.89 -26.55 13.29 55.43 0.74 -25.81 16 18 Si 0.89 21.19 29.54 -169.99 -5.02 16.17 16 19 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 20 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 21 H -0.27 -6.32 7.11 56.52 0.40 -5.92 16 22 C -0.04 -0.31 9.32 -38.88 -0.36 -0.67 16 23 H 0.08 0.27 8.14 -51.93 -0.42 -0.16 16 24 H 0.07 0.27 8.09 -51.93 -0.42 -0.15 16 25 H 0.07 0.20 8.09 -51.93 -0.42 -0.22 16 26 H 0.17 0.80 8.06 -52.49 -0.42 0.37 16 27 H 0.40 4.19 6.58 -40.82 -0.27 3.92 16 28 H 0.07 1.22 8.14 -51.93 -0.42 0.80 16 29 H 0.07 1.22 8.14 -51.93 -0.42 0.80 16 30 H 0.05 0.98 8.14 -51.93 -0.42 0.56 16 31 H 0.05 0.98 8.14 -51.93 -0.42 0.56 16 32 H 0.02 0.52 8.14 -51.93 -0.42 0.10 16 33 H 0.02 0.52 8.14 -51.93 -0.42 0.10 16 34 H 0.26 7.34 8.31 -40.82 -0.34 7.00 16 35 H 0.15 0.93 6.52 -52.48 -0.34 0.58 16 LS Contribution 318.12 15.07 4.79 4.79 Total: -1.00 -32.92 318.12 -7.95 -40.87 By element: Atomic # 1 Polarization: 1.24 SS G_CDS: -4.37 Total: -3.14 kcal Atomic # 6 Polarization: -4.07 SS G_CDS: -2.36 Total: -6.43 kcal Atomic # 7 Polarization: -42.07 SS G_CDS: 0.30 Total: -41.77 kcal Atomic # 8 Polarization: -9.36 SS G_CDS: 0.07 Total: -9.29 kcal Atomic # 14 Polarization: 21.19 SS G_CDS: -5.02 Total: 16.17 kcal Atomic # 17 Polarization: 0.16 SS G_CDS: -1.36 Total: -1.20 kcal Total LS contribution 4.79 Total: 4.79 kcal Total: -32.92 -7.95 -40.87 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000878731067.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.738 kcal (2) G-P(sol) polarization free energy of solvation -32.923 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.185 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.948 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.871 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.133 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds