Wall clock time and date at job start Tue Mar 31 2020 05:20:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 C 1.52998 * 109.47157 * 258.27274 * 3 2 1 5 5 N 1.46905 * 109.46971 * 178.35955 * 4 3 2 6 6 C 1.46898 * 110.99944 * 295.82966 * 5 4 3 7 7 C 1.50692 * 109.47562 * 288.42068 * 6 5 4 8 8 H 1.08002 * 119.99849 * 0.68497 * 7 6 5 9 9 C 1.37874 * 120.00400 * 180.68391 * 7 6 5 10 10 N 1.31510 * 120.00428 * 180.02562 * 9 7 6 11 11 Si 1.86800 * 119.99762 * 359.97438 * 9 7 6 12 12 H 1.48503 * 109.46634 * 90.00240 * 11 9 7 13 13 H 1.48496 * 109.47362 * 209.99882 * 11 9 7 14 14 H 1.48494 * 109.47291 * 330.00333 * 11 9 7 15 15 C 1.46895 * 110.99700 * 59.78894 * 5 4 3 16 16 C 1.52999 * 109.47539 * 66.04704 * 15 5 4 17 17 N 1.46497 * 109.47190 * 180.02562 * 16 15 5 18 18 C 1.35051 * 126.04164 * 124.99882 * 17 16 15 19 19 C 1.35368 * 107.73305 * 179.97438 * 18 17 16 20 20 Cl 1.73593 * 126.04874 * 179.97438 * 19 18 17 21 21 C 1.39936 * 107.90442 * 359.97438 * 19 18 17 22 22 N 1.30843 * 108.21573 * 359.75850 * 21 19 18 23 23 H 1.08996 * 109.47116 * 138.27122 * 3 2 1 24 24 H 1.09008 * 109.46816 * 18.27221 * 3 2 1 25 25 H 1.08998 * 109.47327 * 58.35993 * 4 3 2 26 26 H 1.08996 * 109.47224 * 298.35908 * 4 3 2 27 27 H 1.09000 * 109.46788 * 48.42405 * 6 5 4 28 28 H 1.09006 * 109.46490 * 168.42049 * 6 5 4 29 29 H 0.96996 * 120.00604 * 180.02562 * 10 9 7 30 30 H 1.09001 * 109.46839 * 186.04421 * 15 5 4 31 31 H 1.09007 * 109.47257 * 306.04189 * 15 5 4 32 32 H 1.09001 * 109.46824 * 299.99726 * 16 15 5 33 33 H 1.08990 * 109.47206 * 59.99445 * 16 15 5 34 34 H 1.08006 * 126.12951 * 359.93795 * 18 17 16 35 35 H 1.08001 * 125.89252 * 179.97438 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1179 0.2941 1.4124 5 7 4.5864 0.2559 1.4206 6 6 5.0798 -1.0905 1.1020 7 6 4.8102 -2.0122 2.2632 8 1 4.3113 -1.6381 3.1450 9 6 5.2005 -3.3331 2.2001 10 7 4.9648 -4.1376 3.2134 11 14 6.0628 -3.9803 0.6747 12 1 7.5304 -3.8123 0.8270 13 1 5.7449 -5.4203 0.4997 14 1 5.5987 -3.2228 -0.5152 15 6 5.1440 1.2532 0.4973 16 6 4.8136 2.6585 1.0042 17 7 5.3692 3.6530 0.0831 18 6 4.6818 4.6426 -0.5268 19 6 5.5543 5.3401 -1.2915 20 17 5.1733 6.7146 -2.2809 21 6 6.8177 4.7571 -1.1432 22 7 6.7087 3.7496 -0.3155 23 1 2.9710 0.7677 -0.6840 24 1 2.9717 -0.9751 -0.3222 25 1 2.7311 -0.4566 2.1016 26 1 2.7783 1.2820 1.7233 27 1 4.5684 -1.4644 0.2150 28 1 6.1525 -1.0489 0.9125 29 1 5.2396 -5.0667 3.1692 30 1 6.2258 1.1321 0.4418 31 1 4.7114 1.1132 -0.4934 32 1 3.7317 2.7796 1.0597 33 1 5.2461 2.7985 1.9947 34 1 3.6252 4.8415 -0.4235 35 1 7.7268 5.0845 -1.6257 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000459379390.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:20:35 Heat of formation + Delta-G solvation = 110.232831 kcal Electronic energy + Delta-G solvation = -19171.057808 eV Core-core repulsion = 16039.506379 eV Total energy + Delta-G solvation = -3131.551429 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.094 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -41.42293 -38.39159 -36.60378 -36.21402 -33.78287 -32.60369 -30.87666 -30.26667 -28.95390 -26.62047 -24.62862 -22.72382 -21.38001 -20.90618 -19.82016 -17.79618 -17.52073 -16.86267 -15.80006 -15.58194 -14.91891 -14.74425 -14.62478 -14.23024 -13.79518 -13.71535 -13.46147 -13.21146 -12.92383 -12.48867 -12.33112 -12.13611 -11.80546 -11.76601 -11.60822 -11.47148 -11.15971 -10.84690 -10.69517 -10.62325 -10.25579 -10.09208 -9.70688 -9.47013 -8.68307 -8.59577 -7.76691 -6.16399 -4.15610 1.57001 1.78753 2.41342 2.62859 2.89527 2.92023 3.20293 3.26657 3.29678 4.04667 4.24275 4.30858 4.52569 4.65424 4.82134 4.95517 5.11740 5.14741 5.21659 5.27893 5.31421 5.39612 5.49541 5.77113 5.88535 5.98235 6.18233 6.32931 6.62010 6.63856 6.71213 7.34305 7.39062 7.52603 7.67052 7.74176 8.47391 8.92076 9.43721 10.96371 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.018064 B = 0.003988 C = 0.003499 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1549.706789 B = 7018.658775 C = 8001.310807 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.451 5.451 2 C 0.220 3.780 3 C -0.075 4.075 4 C 0.063 3.937 5 N -0.513 5.513 6 C 0.158 3.842 7 C -0.514 4.514 8 H 0.083 0.917 9 C 0.072 3.928 10 N -0.895 5.895 11 Si 0.871 3.129 12 H -0.275 1.275 13 H -0.286 1.286 14 H -0.268 1.268 15 C 0.034 3.966 16 C 0.133 3.867 17 N -0.354 5.354 18 C 0.073 3.927 19 C -0.193 4.193 20 Cl -0.050 7.050 21 C 0.058 3.942 22 N -0.273 5.273 23 H 0.099 0.901 24 H 0.118 0.882 25 H 0.102 0.898 26 H 0.069 0.931 27 H -0.001 1.001 28 H 0.029 0.971 29 H 0.265 0.735 30 H 0.089 0.911 31 H 0.038 0.962 32 H 0.099 0.901 33 H 0.102 0.898 34 H 0.182 0.818 35 H 0.189 0.811 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.004 17.776 -9.350 20.110 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.129 5.129 2 C -0.098 4.098 3 C -0.117 4.117 4 C -0.067 4.067 5 N -0.235 5.235 6 C 0.033 3.967 7 C -0.552 4.552 8 H 0.101 0.899 9 C -0.131 4.131 10 N -0.534 5.534 11 Si 0.698 3.302 12 H -0.200 1.200 13 H -0.212 1.212 14 H -0.192 1.192 15 C -0.095 4.095 16 C 0.012 3.988 17 N -0.136 5.136 18 C -0.076 4.076 19 C -0.232 4.232 20 Cl -0.022 7.022 21 C -0.129 4.129 22 N -0.094 5.094 23 H 0.117 0.883 24 H 0.136 0.864 25 H 0.121 0.879 26 H 0.087 0.913 27 H 0.017 0.983 28 H 0.047 0.953 29 H 0.075 0.925 30 H 0.108 0.892 31 H 0.056 0.944 32 H 0.117 0.883 33 H 0.120 0.880 34 H 0.199 0.801 35 H 0.206 0.794 Dipole moment (debyes) X Y Z Total from point charges 0.032 16.730 -8.163 18.615 hybrid contribution 0.210 0.068 -2.144 2.155 sum 0.242 16.797 -10.307 19.709 Atomic orbital electron populations 1.81178 1.13055 1.09469 1.09166 1.29120 0.95123 0.92704 0.92814 1.20213 0.82002 1.06098 1.03351 1.22227 0.88715 1.02621 0.93104 1.62191 1.05181 1.07226 1.48912 1.20324 0.95349 0.84259 0.96801 1.20945 1.39318 0.92924 1.02034 0.89908 1.24877 0.95498 0.96804 0.95906 1.69871 1.47057 1.05820 1.30616 0.86934 0.80670 0.78552 0.84013 1.20023 1.21160 1.19232 1.22416 1.02243 0.90239 0.94566 1.21982 0.98686 0.86291 0.91836 1.48659 1.05775 1.23604 1.35578 1.22280 0.98960 0.90687 0.95682 1.20757 0.94906 0.99472 1.08057 1.98318 1.94381 1.41024 1.68462 1.23877 0.97731 0.93667 0.97597 1.77561 0.95621 1.20007 1.16249 0.88274 0.86394 0.87948 0.91289 0.98338 0.95297 0.92485 0.89234 0.94360 0.88293 0.87997 0.80136 0.79413 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.45 -7.45 18.54 42.15 0.78 -6.67 16 2 C 0.22 3.11 15.43 -20.76 -0.32 2.79 16 3 C -0.07 -0.92 5.05 -29.52 -0.15 -1.07 16 4 C 0.06 0.88 4.93 -3.82 -0.02 0.86 16 5 N -0.51 -8.21 4.66 -236.08 -1.10 -9.31 16 6 C 0.16 3.20 3.67 -4.98 -0.02 3.18 16 7 C -0.51 -12.98 9.09 -34.45 -0.31 -13.29 16 8 H 0.08 2.30 7.72 -52.49 -0.41 1.89 16 9 C 0.07 1.91 5.47 -17.82 -0.10 1.82 16 10 N -0.90 -25.89 13.96 55.43 0.77 -25.12 16 11 Si 0.87 19.85 27.45 -169.99 -4.67 15.19 16 12 H -0.27 -6.24 7.11 56.52 0.40 -5.84 16 13 H -0.29 -6.59 7.11 56.52 0.40 -6.19 16 14 H -0.27 -5.71 6.56 56.52 0.37 -5.34 16 15 C 0.03 0.45 4.89 -3.83 -0.02 0.43 16 16 C 0.13 1.38 6.43 -4.04 -0.03 1.36 16 17 N -0.35 -3.92 3.68 -61.33 -0.23 -4.15 16 18 C 0.07 0.69 11.43 -17.16 -0.20 0.49 16 19 C -0.19 -1.94 6.65 -39.97 -0.27 -2.21 16 20 Cl -0.05 -0.46 29.30 -51.86 -1.52 -1.98 16 21 C 0.06 0.61 12.02 -17.34 -0.21 0.40 16 22 N -0.27 -3.46 12.42 30.64 0.38 -3.08 16 23 H 0.10 0.98 6.36 -51.93 -0.33 0.65 16 24 H 0.12 1.61 6.21 -51.92 -0.32 1.29 16 25 H 0.10 1.71 7.15 -51.93 -0.37 1.34 16 26 H 0.07 0.76 6.48 -51.93 -0.34 0.42 16 27 H 0.00 -0.02 5.02 -51.93 -0.26 -0.28 16 28 H 0.03 0.61 7.21 -51.93 -0.37 0.23 16 29 H 0.27 7.23 8.31 -40.82 -0.34 6.89 16 30 H 0.09 1.32 7.87 -51.93 -0.41 0.91 16 31 H 0.04 0.46 6.03 -51.93 -0.31 0.15 16 32 H 0.10 0.79 6.49 -51.93 -0.34 0.46 16 33 H 0.10 1.11 8.14 -51.93 -0.42 0.69 16 34 H 0.18 1.17 8.06 -52.48 -0.42 0.75 16 35 H 0.19 1.47 8.06 -52.49 -0.42 1.05 16 LS Contribution 314.96 15.07 4.75 4.75 Total: -1.00 -30.19 314.96 -6.36 -36.55 By element: Atomic # 1 Polarization: 2.96 SS G_CDS: -3.89 Total: -0.93 kcal Atomic # 6 Polarization: -3.61 SS G_CDS: -1.63 Total: -5.24 kcal Atomic # 7 Polarization: -48.94 SS G_CDS: 0.61 Total: -48.33 kcal Atomic # 14 Polarization: 19.85 SS G_CDS: -4.67 Total: 15.19 kcal Atomic # 17 Polarization: -0.46 SS G_CDS: -1.52 Total: -1.98 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -30.19 -6.36 -36.55 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000459379390.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 146.781 kcal (2) G-P(sol) polarization free energy of solvation -30.193 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 116.588 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.355 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.549 kcal (6) G-S(sol) free energy of system = (1) + (5) 110.233 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds