Wall clock time and date at job start Tue Mar 31 2020 05:32:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52998 * 109.47193 * 2 1 4 4 C 1.50697 * 109.47171 * 120.00026 * 2 1 3 5 5 N 1.28017 * 120.00296 * 359.97438 * 4 2 1 6 6 N 1.40096 * 120.00349 * 179.97438 * 5 4 2 7 7 C 1.39044 * 120.00042 * 180.02562 * 6 5 4 8 8 N 1.32676 * 120.10328 * 0.02562 * 7 6 5 9 9 C 1.32232 * 119.92379 * 179.97438 * 8 7 6 10 10 C 1.38175 * 120.14168 * 359.97438 * 9 8 7 11 11 N 1.32301 * 120.20271 * 0.02562 * 10 9 8 12 12 C 1.32009 * 120.07835 * 0.02562 * 11 10 9 13 13 Cl 1.73601 * 120.07515 * 179.97438 * 12 11 10 14 14 C 1.53001 * 109.47289 * 240.00067 * 2 1 3 15 15 C 1.50697 * 109.47048 * 59.99884 * 14 2 1 16 16 H 1.08004 * 120.00202 * 0.02562 * 15 14 2 17 17 C 1.37875 * 120.00158 * 180.02562 * 15 14 2 18 18 N 1.31517 * 119.99780 * 359.97438 * 17 15 14 19 19 Si 1.86802 * 120.00152 * 180.02562 * 17 15 14 20 20 H 1.48498 * 109.47269 * 59.99481 * 19 17 15 21 21 H 1.48504 * 109.46911 * 179.97438 * 19 17 15 22 22 H 1.48500 * 109.47032 * 299.99416 * 19 17 15 23 23 H 1.09006 * 109.46860 * 299.99714 * 1 2 3 24 24 H 1.08993 * 109.47430 * 59.99644 * 1 2 3 25 25 H 1.09003 * 109.47041 * 180.02562 * 1 2 3 26 26 H 1.08997 * 109.47225 * 179.97438 * 3 2 1 27 27 H 1.09003 * 109.47217 * 300.00488 * 3 2 1 28 28 H 1.09002 * 109.47225 * 59.99902 * 3 2 1 29 29 H 1.08007 * 120.00245 * 179.97438 * 4 2 1 30 30 H 0.97001 * 120.00112 * 0.02562 * 6 5 4 31 31 H 1.07995 * 119.93176 * 179.97438 * 9 8 7 32 32 H 1.08000 * 119.89724 * 179.72199 * 10 9 8 33 33 H 1.08997 * 109.47266 * 179.97438 * 14 2 1 34 34 H 1.08999 * 109.47065 * 300.00279 * 14 2 1 35 35 H 0.96997 * 119.99831 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0323 -0.7104 1.2304 5 7 1.2005 -1.1965 2.0734 6 7 1.6675 -1.8574 3.2170 7 6 0.7639 -2.3858 4.1323 8 7 -0.5409 -2.2658 3.9243 9 6 -1.3970 -2.7701 4.7968 10 6 -0.9356 -3.4223 5.9242 11 7 0.3644 -3.5450 6.1368 12 6 1.2265 -3.0438 5.2718 13 17 2.9324 -3.2044 5.5512 14 6 2.0400 -0.7212 -1.2492 15 6 1.5377 -0.0108 -2.4797 16 1 0.9171 0.8675 -2.3806 17 6 1.8704 -0.4821 -3.7319 18 7 2.6265 -1.5514 -3.8526 19 14 1.2483 0.3989 -5.2572 20 1 1.7442 1.7986 -5.2572 21 1 1.7432 -0.3012 -6.4697 22 1 -0.2367 0.3998 -5.2571 23 1 -0.3633 0.5138 0.8901 24 1 -0.3634 0.5138 -0.8899 25 1 -0.3633 -1.0277 0.0005 26 1 3.1300 1.4425 0.0005 27 1 1.6766 1.9564 -0.8900 28 1 1.6767 1.9563 0.8900 29 1 3.0942 -0.8095 1.4012 30 1 2.6212 -1.9464 3.3703 31 1 -2.4592 -2.6721 4.6279 32 1 -1.6383 -3.8287 6.6365 33 1 3.1300 -0.7208 -1.2495 34 1 1.6767 -1.7489 -1.2493 35 1 2.8608 -1.8828 -4.7336 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000755718744.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:32:03 Heat of formation + Delta-G solvation = 76.516715 kcal Electronic energy + Delta-G solvation = -19073.627659 eV Core-core repulsion = 15940.614190 eV Total energy + Delta-G solvation = -3133.013469 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 282.094 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -41.17920 -38.03903 -37.01523 -36.13089 -34.15616 -32.83265 -31.89580 -29.13965 -27.07453 -26.41416 -25.07219 -24.22414 -23.44205 -21.57810 -18.96886 -17.87175 -17.47255 -17.27648 -16.34875 -16.10127 -15.57193 -14.98379 -14.61503 -13.76326 -13.54623 -13.46605 -12.91897 -12.78443 -12.32502 -12.07703 -11.77345 -11.65218 -11.46069 -11.14700 -10.99464 -10.93442 -10.85733 -10.61168 -10.29425 -10.15631 -9.94397 -9.68766 -9.35188 -9.21912 -9.00488 -8.38128 -7.88472 -6.02810 -4.04154 0.53811 0.95970 1.49443 2.40090 2.53236 3.32304 3.37377 3.39301 3.52771 3.92010 4.03864 4.38086 4.44820 4.86386 4.99968 5.15137 5.33468 5.40801 5.84256 5.86570 5.93398 6.15584 6.31718 6.48533 6.62071 6.65273 6.77702 7.01812 7.06224 7.12034 7.20439 7.53052 7.57659 7.69537 7.95140 8.32908 8.39010 8.99796 9.59186 11.08716 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.028418 B = 0.003412 C = 0.003274 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 985.047781 B = 8203.606282 C = 8549.073404 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.012 4.012 3 C -0.123 4.123 4 C 0.107 3.893 5 N -0.241 5.241 6 N -0.565 5.565 7 C 0.405 3.595 8 N -0.450 5.450 9 C 0.109 3.891 10 C -0.007 4.007 11 N -0.395 5.395 12 C 0.056 3.944 13 Cl -0.026 7.026 14 C 0.040 3.960 15 C -0.511 4.511 16 H 0.062 0.938 17 C 0.058 3.942 18 N -0.896 5.896 19 Si 0.891 3.109 20 H -0.277 1.277 21 H -0.289 1.289 22 H -0.276 1.276 23 H 0.038 0.962 24 H 0.063 0.937 25 H 0.051 0.949 26 H 0.049 0.951 27 H 0.076 0.924 28 H 0.035 0.965 29 H 0.101 0.899 30 H 0.394 0.606 31 H 0.179 0.821 32 H 0.175 0.825 33 H 0.019 0.981 34 H 0.019 0.981 35 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.446 -1.222 17.942 18.311 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.015 4.015 3 C -0.181 4.181 4 C -0.108 4.108 5 N -0.042 5.042 6 N -0.286 5.286 7 C 0.165 3.835 8 N -0.171 5.171 9 C -0.054 4.054 10 C -0.169 4.169 11 N -0.111 5.111 12 C -0.120 4.120 13 Cl 0.002 6.998 14 C 0.002 3.998 15 C -0.550 4.550 16 H 0.080 0.920 17 C -0.144 4.144 18 N -0.535 5.535 19 Si 0.718 3.282 20 H -0.202 1.202 21 H -0.214 1.214 22 H -0.202 1.202 23 H 0.057 0.943 24 H 0.082 0.918 25 H 0.070 0.930 26 H 0.068 0.932 27 H 0.095 0.905 28 H 0.054 0.946 29 H 0.118 0.882 30 H 0.236 0.764 31 H 0.196 0.804 32 H 0.192 0.808 33 H 0.037 0.963 34 H 0.037 0.963 35 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges -4.162 -1.464 18.026 18.558 hybrid contribution 1.280 0.165 -0.761 1.498 sum -2.881 -1.299 17.265 17.552 Atomic orbital electron populations 1.21593 0.93670 1.01794 1.00366 1.19818 0.96679 0.94631 0.90356 1.21721 1.00479 0.94689 1.01250 1.26741 0.96389 0.93351 0.94335 1.74624 1.27301 1.08094 0.94229 1.45739 1.06040 1.56923 1.19908 1.18405 0.88924 0.89907 0.86300 1.68380 0.99508 1.19893 1.29366 1.23803 1.00901 0.91229 0.89493 1.23387 0.90856 1.02935 0.99677 1.67560 1.03215 1.13441 1.26866 1.21821 0.89041 1.06403 0.94746 1.98393 1.08510 1.96715 1.96229 1.19135 0.96294 0.95386 0.89024 1.21123 1.31388 1.12202 0.90253 0.91997 1.24996 0.95230 0.95041 0.99098 1.69951 1.36906 1.23029 1.23630 0.86680 0.79263 0.79745 0.82465 1.20231 1.21430 1.20207 0.94327 0.91775 0.92990 0.93156 0.90526 0.94607 0.88185 0.76423 0.80424 0.80772 0.96259 0.96267 0.92958 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -2.23 7.45 37.16 0.28 -1.96 16 2 C -0.01 -0.23 0.75 -155.66 -0.12 -0.35 16 3 C -0.12 -2.11 8.20 37.16 0.30 -1.81 16 4 C 0.11 1.83 9.56 -13.87 -0.13 1.69 16 5 N -0.24 -4.20 9.76 32.67 0.32 -3.88 16 6 N -0.57 -8.58 6.37 31.25 0.20 -8.38 16 7 C 0.41 5.99 7.61 -154.61 -1.18 4.82 16 8 N -0.45 -6.63 10.07 -12.19 -0.12 -6.75 16 9 C 0.11 1.12 11.21 -17.40 -0.20 0.93 16 10 C -0.01 -0.07 11.21 -17.37 -0.19 -0.26 16 11 N -0.40 -4.94 10.48 -10.00 -0.10 -5.04 16 12 C 0.06 0.75 7.31 -17.01 -0.12 0.62 16 13 Cl -0.03 -0.31 27.78 -51.86 -1.44 -1.75 16 14 C 0.04 0.95 4.02 -27.88 -0.11 0.84 16 15 C -0.51 -13.28 7.65 -34.44 -0.26 -13.54 16 16 H 0.06 1.54 5.68 -52.48 -0.30 1.24 16 17 C 0.06 1.57 5.46 -17.82 -0.10 1.47 16 18 N -0.90 -25.92 13.29 55.43 0.74 -25.18 16 19 Si 0.89 20.84 29.54 -169.99 -5.02 15.82 16 20 H -0.28 -6.33 7.11 56.52 0.40 -5.93 16 21 H -0.29 -6.78 7.11 56.52 0.40 -6.38 16 22 H -0.28 -6.40 7.11 56.52 0.40 -5.99 16 23 H 0.04 0.68 8.06 -51.93 -0.42 0.26 16 24 H 0.06 1.26 6.62 -51.93 -0.34 0.92 16 25 H 0.05 1.05 8.06 -51.93 -0.42 0.63 16 26 H 0.05 0.82 8.14 -51.93 -0.42 0.40 16 27 H 0.08 1.40 6.62 -51.93 -0.34 1.05 16 28 H 0.03 0.54 8.14 -51.93 -0.42 0.12 16 29 H 0.10 1.49 8.00 -52.48 -0.42 1.07 16 30 H 0.39 5.14 7.31 -182.60 -1.33 3.80 16 31 H 0.18 1.15 8.06 -52.49 -0.42 0.72 16 32 H 0.18 0.98 8.06 -52.49 -0.42 0.56 16 33 H 0.02 0.48 8.14 -51.93 -0.42 0.06 16 34 H 0.02 0.50 8.14 -51.93 -0.42 0.08 16 35 H 0.26 7.20 8.31 -40.82 -0.34 6.87 16 LS Contribution 316.39 15.07 4.77 4.77 Total: -1.00 -30.73 316.39 -7.75 -38.47 By element: Atomic # 1 Polarization: 4.72 SS G_CDS: -5.25 Total: -0.53 kcal Atomic # 6 Polarization: -5.72 SS G_CDS: -1.83 Total: -7.55 kcal Atomic # 7 Polarization: -50.26 SS G_CDS: 1.03 Total: -49.24 kcal Atomic # 14 Polarization: 20.84 SS G_CDS: -5.02 Total: 15.82 kcal Atomic # 17 Polarization: -0.31 SS G_CDS: -1.44 Total: -1.75 kcal Total LS contribution 4.77 Total: 4.77 kcal Total: -30.73 -7.75 -38.47 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000755718744.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 114.989 kcal (2) G-P(sol) polarization free energy of solvation -30.726 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 84.263 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.747 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.472 kcal (6) G-S(sol) free energy of system = (1) + (5) 76.517 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds