Wall clock time and date at job start Tue Mar 31 2020 05:58:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53005 * 109.47230 * 2 1 4 4 C 1.52998 * 109.47547 * 240.00041 * 2 1 3 5 5 H 1.09005 * 109.46989 * 305.00146 * 4 2 1 6 6 F 1.39898 * 109.46963 * 64.99824 * 4 2 1 7 7 C 1.50696 * 109.47585 * 184.99965 * 4 2 1 8 8 O 1.20825 * 120.00027 * 315.00448 * 7 4 2 9 9 O 1.34273 * 120.00102 * 134.99752 * 7 4 2 10 10 C 1.35921 * 117.00140 * 175.01509 * 9 7 4 11 11 C 1.38821 * 120.01837 * 255.02665 * 10 9 7 12 12 C 1.38195 * 120.07591 * 179.72274 * 11 10 9 13 13 C 1.38146 * 120.12888 * 0.54572 * 12 11 10 14 14 C 1.38903 * 120.03548 * 359.72514 * 13 12 11 15 15 O 1.35756 * 120.03728 * 179.97438 * 14 13 12 16 16 C 1.34827 * 116.99575 * 185.62133 * 15 14 13 17 17 H 1.07995 * 120.00568 * 354.94129 * 16 15 14 18 18 C 1.38655 * 119.99652 * 174.93733 * 16 15 14 19 19 N 1.31555 * 120.00408 * 0.02562 * 18 16 15 20 20 Si 1.86801 * 119.99865 * 179.97438 * 18 16 15 21 21 H 1.48494 * 109.47210 * 0.02562 * 20 18 16 22 22 H 1.48508 * 109.46664 * 120.00489 * 20 18 16 23 23 H 1.48496 * 109.47214 * 239.99927 * 20 18 16 24 24 C 1.38570 * 120.01935 * 75.29432 * 10 9 7 25 25 H 1.08996 * 109.47026 * 299.99907 * 1 2 3 26 26 H 1.09000 * 109.46784 * 60.00053 * 1 2 3 27 27 H 1.08991 * 109.46966 * 179.97438 * 1 2 3 28 28 H 1.09004 * 109.47260 * 119.99967 * 2 1 3 29 29 H 1.08996 * 109.47040 * 60.00101 * 3 2 1 30 30 H 1.09005 * 109.46879 * 179.97438 * 3 2 1 31 31 H 1.08991 * 109.46995 * 299.99846 * 3 2 1 32 32 H 1.07997 * 119.96080 * 359.97012 * 11 10 9 33 33 H 1.08001 * 119.93445 * 180.25110 * 12 11 10 34 34 H 1.07995 * 119.98146 * 179.70331 * 13 12 11 35 35 H 0.96996 * 120.00679 * 180.02562 * 19 18 16 36 36 H 1.08000 * 120.06307 * 359.97438 * 24 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 1 1.6055 -1.7198 -1.2951 6 9 1.6700 0.0013 -2.3886 7 6 3.5419 -0.8293 -1.1889 8 8 4.2039 0.1275 -0.8633 9 8 4.1445 -1.9891 -1.4968 10 6 5.5034 -1.9905 -1.5235 11 6 6.1742 -2.0047 -2.7388 12 6 7.5558 -2.0003 -2.7674 13 6 8.2738 -1.9931 -1.5872 14 6 7.6078 -1.9845 -0.3683 15 8 8.3133 -1.9780 0.7916 16 6 7.6097 -2.0875 1.9365 17 1 6.5302 -2.0928 1.9086 18 6 8.2724 -2.1933 3.1499 19 7 9.5875 -2.1864 3.1840 20 14 7.2977 -2.3443 4.7362 21 1 5.8451 -2.3269 4.4283 22 1 7.6450 -3.6209 5.4109 23 1 7.6283 -1.2059 5.6306 24 6 6.2201 -1.9832 -0.3375 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 1.8934 -0.5138 0.8900 29 1 1.6767 1.9563 0.8900 30 1 3.1301 1.4425 0.0005 31 1 1.6767 1.9563 -0.8899 32 1 5.6156 -2.0152 -3.6630 33 1 8.0753 -2.0073 -3.7142 34 1 9.3535 -1.9945 -1.6123 35 1 10.0510 -2.2608 4.0328 36 1 5.6999 -1.9761 0.6089 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000841344094.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:58:54 Heat of formation + Delta-G solvation = -129.457238 kcal Electronic energy + Delta-G solvation = -22051.270330 eV Core-core repulsion = 18416.403283 eV Total energy + Delta-G solvation = -3634.867047 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 282.110 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -48.19945 -41.02416 -38.90346 -37.42651 -35.88843 -35.39447 -32.35844 -30.10907 -29.09556 -28.20389 -27.31067 -25.47097 -23.32620 -21.80418 -21.02409 -20.27560 -18.49592 -18.18062 -17.62407 -16.84449 -16.36801 -15.91412 -15.42066 -15.15551 -14.59515 -14.27844 -14.12851 -13.95885 -13.69276 -13.42882 -13.20233 -13.10030 -12.71594 -12.32036 -12.20948 -11.96876 -11.62629 -11.46108 -11.37173 -11.17160 -11.10207 -10.97180 -10.90192 -10.52578 -10.39234 -10.03380 -9.57166 -8.92731 -8.24360 -7.41337 -6.52983 -4.12532 1.64056 1.97751 2.15011 2.76296 3.08262 3.09141 3.15001 3.90049 4.04904 4.35136 4.37996 4.51075 4.63667 4.95495 4.99310 5.09858 5.15451 5.26985 5.48543 5.53893 5.63901 5.71556 5.77177 5.83372 5.93053 6.01846 6.08337 6.12245 6.39623 6.49980 6.82080 6.92393 7.02453 7.07172 7.26892 7.48985 7.89630 7.96272 8.91973 9.57801 10.64475 Molecular weight = 282.11amu Principal moments of inertia in cm(-1) A = 0.014802 B = 0.005485 C = 0.004215 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1891.204165 B = 5103.874104 C = 6642.036746 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.114 4.114 3 C -0.169 4.169 4 C 0.118 3.882 5 H 0.116 0.884 6 F -0.181 7.181 7 C 0.431 3.569 8 O -0.455 6.455 9 O -0.289 6.289 10 C 0.115 3.885 11 C -0.209 4.209 12 C -0.064 4.064 13 C -0.184 4.184 14 C 0.164 3.836 15 O -0.169 6.169 16 C -0.393 4.393 17 H 0.091 0.909 18 C 0.042 3.958 19 N -0.858 5.858 20 Si 0.941 3.059 21 H -0.267 1.267 22 H -0.274 1.274 23 H -0.274 1.274 24 C -0.229 4.229 25 H 0.067 0.933 26 H 0.063 0.937 27 H 0.060 0.940 28 H 0.095 0.905 29 H 0.059 0.941 30 H 0.092 0.908 31 H 0.058 0.942 32 H 0.116 0.884 33 H 0.124 0.876 34 H 0.124 0.876 35 H 0.271 0.729 36 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.196 1.618 -6.823 16.736 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.133 4.133 3 C -0.226 4.226 4 C 0.080 3.920 5 H 0.134 0.866 6 F -0.162 7.162 7 C 0.271 3.729 8 O -0.338 6.338 9 O -0.204 6.204 10 C 0.075 3.925 11 C -0.229 4.229 12 C -0.083 4.083 13 C -0.204 4.204 14 C 0.109 3.891 15 O -0.072 6.072 16 C -0.469 4.469 17 H 0.109 0.891 18 C -0.163 4.163 19 N -0.493 5.493 20 Si 0.766 3.234 21 H -0.191 1.191 22 H -0.200 1.200 23 H -0.200 1.200 24 C -0.249 4.249 25 H 0.086 0.914 26 H 0.082 0.918 27 H 0.079 0.921 28 H 0.113 0.887 29 H 0.078 0.922 30 H 0.111 0.889 31 H 0.078 0.922 32 H 0.134 0.866 33 H 0.141 0.859 34 H 0.142 0.858 35 H 0.081 0.919 36 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -14.541 1.947 -6.486 16.040 hybrid contribution -0.484 -0.071 0.749 0.894 sum -15.024 1.877 -5.737 16.192 Atomic orbital electron populations 1.21834 0.93087 1.02436 1.03011 1.21664 0.97416 0.98679 0.95555 1.22164 1.04829 0.93616 1.01994 1.21208 0.87735 0.97894 0.85124 0.86574 1.92886 1.91424 1.80024 1.51863 1.24394 0.91884 0.81512 0.75091 1.90657 1.66150 1.37256 1.39703 1.84534 1.20719 1.35206 1.79979 1.18228 0.78428 1.02130 0.93747 1.20513 0.94513 1.12322 0.95529 1.20499 0.92668 0.97988 0.97127 1.20356 1.00047 1.10016 0.89933 1.19114 0.89437 0.92446 0.88099 1.84003 1.34336 1.77889 1.11005 1.21359 0.91442 1.52493 0.81647 0.89125 1.25296 0.96020 0.96284 0.98714 1.70037 1.06788 1.45340 1.27085 0.85643 0.79184 0.78411 0.80191 1.19094 1.19956 1.19971 1.21184 0.94550 1.11495 0.97644 0.91420 0.91797 0.92109 0.88711 0.92228 0.88923 0.92243 0.86637 0.85855 0.85768 0.91891 0.84989 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.17 9.11 37.16 0.34 -0.83 16 2 C -0.11 -1.22 2.75 -90.62 -0.25 -1.47 16 3 C -0.17 -2.04 8.71 37.16 0.32 -1.72 16 4 C 0.12 1.40 3.51 -27.89 -0.10 1.30 16 5 H 0.12 1.03 8.14 -51.93 -0.42 0.61 16 6 F -0.18 -2.32 16.03 2.25 0.04 -2.28 16 7 C 0.43 7.06 7.16 36.00 0.26 7.32 16 8 O -0.45 -8.82 13.23 -18.75 -0.25 -9.07 16 9 O -0.29 -5.13 10.03 -23.63 -0.24 -5.37 16 10 C 0.12 2.33 5.18 -39.24 -0.20 2.13 16 11 C -0.21 -3.84 9.99 -39.38 -0.39 -4.23 16 12 C -0.06 -1.15 10.03 -39.63 -0.40 -1.55 16 13 C -0.18 -3.86 9.99 -39.37 -0.39 -4.25 16 14 C 0.16 4.00 6.65 -39.13 -0.26 3.74 16 15 O -0.17 -4.83 9.76 0.04 0.00 -4.83 16 16 C -0.39 -11.03 9.49 30.89 0.29 -10.74 16 17 H 0.09 2.39 5.20 -52.49 -0.27 2.12 16 18 C 0.04 1.14 5.49 -17.52 -0.10 1.05 16 19 N -0.86 -24.92 13.67 55.48 0.76 -24.17 16 20 Si 0.94 20.46 29.55 -169.99 -5.02 15.43 16 21 H -0.27 -5.57 7.11 56.52 0.40 -5.17 16 22 H -0.27 -5.79 7.11 56.52 0.40 -5.39 16 23 H -0.27 -5.84 7.11 56.52 0.40 -5.43 16 24 C -0.23 -5.25 8.58 -39.25 -0.34 -5.58 16 25 H 0.07 0.48 8.14 -51.93 -0.42 0.06 16 26 H 0.06 0.51 7.94 -51.93 -0.41 0.10 16 27 H 0.06 0.40 8.14 -51.93 -0.42 -0.02 16 28 H 0.09 1.00 8.14 -51.93 -0.42 0.57 16 29 H 0.06 0.62 8.14 -51.93 -0.42 0.20 16 30 H 0.09 1.40 5.26 -51.93 -0.27 1.13 16 31 H 0.06 0.70 7.68 -51.93 -0.40 0.30 16 32 H 0.12 1.81 8.06 -52.49 -0.42 1.39 16 33 H 0.12 1.72 8.06 -52.49 -0.42 1.30 16 34 H 0.12 2.43 8.06 -52.49 -0.42 2.01 16 35 H 0.27 7.18 8.31 -40.82 -0.34 6.84 16 36 H 0.13 3.09 5.64 -52.49 -0.30 2.79 16 LS Contribution 315.14 15.07 4.75 4.75 Total: -1.00 -31.59 315.14 -5.35 -36.94 By element: Atomic # 1 Polarization: 7.59 SS G_CDS: -4.17 Total: 3.42 kcal Atomic # 6 Polarization: -13.61 SS G_CDS: -1.21 Total: -14.83 kcal Atomic # 7 Polarization: -24.92 SS G_CDS: 0.76 Total: -24.17 kcal Atomic # 8 Polarization: -18.78 SS G_CDS: -0.48 Total: -19.27 kcal Atomic # 9 Polarization: -2.32 SS G_CDS: 0.04 Total: -2.28 kcal Atomic # 14 Polarization: 20.46 SS G_CDS: -5.02 Total: 15.43 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -31.59 -5.35 -36.94 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000841344094.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.517 kcal (2) G-P(sol) polarization free energy of solvation -31.591 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.108 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.349 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.940 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.457 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds