Wall clock time and date at job start Tue Mar 31 2020 05:24:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53010 * 1 3 3 C 1.50706 * 115.54571 * 2 1 4 4 O 1.21271 * 119.99869 * 145.67186 * 3 2 1 5 5 N 1.34773 * 119.99746 * 325.66825 * 3 2 1 6 6 C 1.39271 * 119.99566 * 185.07055 * 5 3 2 7 7 C 1.39673 * 119.57194 * 174.55170 * 6 5 3 8 8 C 1.38662 * 119.49421 * 179.97438 * 7 6 5 9 9 C 1.38346 * 118.66727 * 0.02562 * 8 7 6 10 10 C 1.40579 * 119.13083 * 0.02562 * 9 8 7 11 11 C 1.41336 * 119.78519 * 179.97438 * 10 9 8 12 12 H 1.08004 * 120.00239 * 0.02562 * 11 10 9 13 13 C 1.40022 * 119.99877 * 180.02562 * 11 10 9 14 14 N 1.30743 * 120.00028 * 0.02562 * 13 11 10 15 15 Si 1.86804 * 120.00005 * 180.02562 * 13 11 10 16 16 H 1.48496 * 109.47358 * 90.00126 * 15 13 11 17 17 H 1.48500 * 109.47176 * 209.99963 * 15 13 11 18 18 H 1.48498 * 109.46839 * 329.99922 * 15 13 11 19 19 N 1.31899 * 119.57536 * 354.53299 * 6 5 3 20 20 C 1.52994 * 117.52177 * 214.29939 * 2 1 3 21 21 C 1.52994 * 117.49823 * 145.66545 * 2 1 3 22 22 F 1.39907 * 117.49872 * 215.00193 * 21 2 1 23 23 F 1.39896 * 117.50461 * 0.02617 * 21 2 1 24 24 H 1.09002 * 109.46886 * 34.41977 * 1 2 3 25 25 H 1.09000 * 109.46567 * 154.41961 * 1 2 3 26 26 H 1.09000 * 109.46814 * 274.41633 * 1 2 3 27 27 H 0.96996 * 120.00795 * 5.06833 * 5 3 2 28 28 H 1.08002 * 120.25535 * 359.70457 * 7 6 5 29 29 H 1.08003 * 120.66383 * 180.02562 * 8 7 6 30 30 H 1.08004 * 120.43359 * 180.02562 * 9 8 7 31 31 H 0.97003 * 120.00097 * 180.02562 * 14 13 11 32 32 H 1.09003 * 117.49891 * 0.02562 * 20 2 1 33 33 H 1.08991 * 117.50067 * 145.02565 * 20 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.1800 1.3597 0.0000 4 8 3.2240 1.5328 0.5923 5 7 1.6009 2.3833 -0.6583 6 6 2.2523 3.6111 -0.7476 7 6 1.6991 4.6298 -1.5268 8 6 2.3487 5.8517 -1.6142 9 6 3.5338 6.0243 -0.9217 10 6 4.0399 4.9600 -0.1553 11 6 5.2498 5.1210 0.5572 12 1 5.7823 6.0597 0.5122 13 6 5.7582 4.0637 1.3215 14 7 5.1140 2.9273 1.3756 15 14 7.3570 4.2768 2.2639 16 1 7.0643 4.7923 3.6254 17 1 8.0482 2.9666 2.3688 18 1 8.2297 5.2407 1.5466 19 7 3.3833 3.7970 -0.0950 20 6 2.2371 -1.1209 -0.7646 21 6 2.2365 -1.1206 0.7654 22 9 3.4365 -0.8047 1.4117 23 9 1.4341 -2.0673 1.4113 24 1 -0.3633 0.8478 -0.5809 25 1 -0.3632 -0.9270 -0.4437 26 1 -0.3633 0.0791 1.0246 27 1 0.7306 2.2650 -1.0699 28 1 0.7747 4.4655 -2.0607 29 1 1.9376 6.6526 -2.2109 30 1 4.0633 6.9645 -0.9693 31 1 5.4660 2.1949 1.9054 32 1 1.6122 -1.8584 -1.2682 33 1 3.1721 -0.8749 -1.2676 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000882471473.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:24:44 Heat of formation + Delta-G solvation = -39.264452 kcal Electronic energy + Delta-G solvation = -22336.884264 eV Core-core repulsion = 18614.760715 eV Total energy + Delta-G solvation = -3722.123549 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 282.092 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -48.46059 -47.06017 -39.62857 -37.86805 -35.81556 -34.19932 -33.05883 -30.34527 -29.43954 -28.36092 -25.62020 -23.71900 -22.51555 -21.56103 -20.92870 -19.03352 -18.04720 -17.45468 -16.60661 -16.06085 -15.74774 -15.23512 -14.66124 -14.47604 -14.42212 -13.82394 -13.70859 -13.56489 -13.35968 -13.07194 -13.02350 -12.81094 -12.48856 -12.19339 -11.99971 -11.92708 -11.16686 -10.95711 -10.68825 -10.66612 -10.48266 -9.94557 -9.83716 -9.70146 -9.06163 -9.02461 -7.99458 -7.26091 -7.01348 -6.15142 -4.41341 2.58351 2.92627 3.07206 3.13593 3.18569 3.20620 3.26674 3.51872 3.80463 4.06776 4.25156 4.55505 4.71379 4.92124 4.94928 5.35576 5.44803 5.51339 5.58621 5.83444 5.95737 6.01763 6.09557 6.45601 6.62666 6.79944 6.82535 7.22351 7.51420 7.58424 7.78723 8.00562 8.16385 8.41715 8.71074 9.02382 9.15020 10.21085 10.47428 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.016024 B = 0.007104 C = 0.005067 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1746.970110 B = 3940.570579 C = 5524.398675 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.162 4.162 3 C 0.501 3.499 4 O -0.385 6.385 5 N -0.658 5.658 6 C 0.371 3.629 7 C -0.357 4.357 8 C -0.036 4.036 9 C -0.304 4.304 10 C 0.270 3.730 11 C -0.423 4.423 12 H 0.083 0.917 13 C 0.057 3.943 14 N -0.655 5.655 15 Si 0.896 3.104 16 H -0.271 1.271 17 H -0.278 1.278 18 H -0.263 1.263 19 N -0.475 5.475 20 C -0.152 4.152 21 C 0.226 3.774 22 F -0.135 7.135 23 F -0.162 7.162 24 H 0.073 0.927 25 H 0.071 0.929 26 H 0.073 0.927 27 H 0.399 0.601 28 H 0.091 0.909 29 H 0.096 0.904 30 H 0.097 0.903 31 H 0.274 0.726 32 H 0.126 0.874 33 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.833 -8.353 -3.453 11.961 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.167 4.167 3 C 0.281 3.719 4 O -0.247 6.247 5 N -0.306 5.306 6 C 0.133 3.867 7 C -0.383 4.383 8 C -0.060 4.060 9 C -0.327 4.327 10 C 0.145 3.855 11 C -0.453 4.453 12 H 0.101 0.899 13 C -0.172 4.172 14 N -0.273 5.273 15 Si 0.720 3.280 16 H -0.196 1.196 17 H -0.203 1.203 18 H -0.188 1.188 19 N -0.194 5.194 20 C -0.190 4.190 21 C 0.189 3.811 22 F -0.115 7.115 23 F -0.143 7.143 24 H 0.092 0.908 25 H 0.090 0.910 26 H 0.092 0.908 27 H 0.234 0.766 28 H 0.109 0.891 29 H 0.114 0.886 30 H 0.115 0.885 31 H 0.086 0.914 32 H 0.144 0.856 33 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -6.611 -9.205 -2.318 11.567 hybrid contribution -0.225 0.581 -0.182 0.649 sum -6.836 -8.624 -2.501 11.285 Atomic orbital electron populations 1.21371 0.89310 1.03123 1.03524 1.23121 0.97663 0.92602 1.03298 1.19264 0.86691 0.83562 0.82399 1.91238 1.18016 1.80683 1.34727 1.43263 1.21749 1.10144 1.55448 1.18572 0.91801 0.83672 0.92696 1.20464 1.05785 0.96570 1.15437 1.20560 0.94320 0.94980 0.96128 1.21627 1.00596 1.00821 1.09677 1.18373 0.91922 0.85829 0.89336 1.19597 1.03860 0.99076 1.22793 0.89910 1.26178 0.98463 0.95376 0.97215 1.70274 1.32358 1.00564 1.24145 0.86513 0.82420 0.78599 0.80433 1.19641 1.20262 1.18752 1.68672 1.05674 1.22917 1.22094 1.24413 1.04290 0.98735 0.91568 1.19647 0.81114 0.91734 0.88647 1.93159 1.43059 1.92300 1.82941 1.92995 1.72629 1.64945 1.83705 0.90823 0.91045 0.90803 0.76610 0.89070 0.88578 0.88526 0.91368 0.85571 0.85575 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.22 9.43 37.16 0.35 -0.87 16 2 C -0.16 -2.35 2.62 -155.66 -0.41 -2.75 16 3 C 0.50 10.02 7.35 -10.98 -0.08 9.94 16 4 O -0.39 -9.65 10.92 5.57 0.06 -9.59 16 5 N -0.66 -12.70 5.32 -11.40 -0.06 -12.76 16 6 C 0.37 8.94 7.43 -154.98 -1.15 7.79 16 7 C -0.36 -7.89 9.96 -38.89 -0.39 -8.27 16 8 C -0.04 -0.80 10.15 -39.38 -0.40 -1.20 16 9 C -0.30 -7.61 9.83 -38.66 -0.38 -7.99 16 10 C 0.27 7.57 6.55 -85.00 -0.56 7.02 16 11 C -0.42 -11.63 9.14 -37.74 -0.34 -11.98 16 12 H 0.08 2.13 7.85 -52.48 -0.41 1.72 16 13 C 0.06 1.51 5.50 -17.35 -0.10 1.42 16 14 N -0.65 -18.31 8.99 55.55 0.50 -17.81 16 15 Si 0.90 19.47 29.56 -169.99 -5.02 14.45 16 16 H -0.27 -5.84 7.11 56.52 0.40 -5.43 16 17 H -0.28 -5.98 7.11 56.52 0.40 -5.58 16 18 H -0.26 -5.58 7.11 56.52 0.40 -5.18 16 19 N -0.47 -13.26 5.74 -10.25 -0.06 -13.32 16 20 C -0.15 -1.85 9.85 -26.73 -0.26 -2.11 16 21 C 0.23 3.48 5.13 -26.73 -0.14 3.34 16 22 F -0.13 -2.61 15.71 2.25 0.04 -2.58 16 23 F -0.16 -2.32 17.14 2.25 0.04 -2.28 16 24 H 0.07 0.67 6.32 -51.93 -0.33 0.35 16 25 H 0.07 0.58 7.90 -51.93 -0.41 0.17 16 26 H 0.07 0.80 8.14 -51.93 -0.42 0.37 16 27 H 0.40 5.86 6.90 -40.82 -0.28 5.58 16 28 H 0.09 1.71 8.06 -52.49 -0.42 1.28 16 29 H 0.10 1.82 8.06 -52.48 -0.42 1.40 16 30 H 0.10 2.24 8.06 -52.48 -0.42 1.82 16 31 H 0.27 7.29 8.29 -40.82 -0.34 6.96 16 32 H 0.13 1.06 8.05 -51.93 -0.42 0.64 16 33 H 0.13 1.62 8.14 -51.93 -0.42 1.20 16 LS Contribution 293.41 15.07 4.42 4.42 Total: -1.00 -32.80 293.41 -7.04 -39.84 By element: Atomic # 1 Polarization: 8.40 SS G_CDS: -3.10 Total: 5.31 kcal Atomic # 6 Polarization: -1.82 SS G_CDS: -3.85 Total: -5.68 kcal Atomic # 7 Polarization: -44.27 SS G_CDS: 0.38 Total: -43.89 kcal Atomic # 8 Polarization: -9.65 SS G_CDS: 0.06 Total: -9.59 kcal Atomic # 9 Polarization: -4.94 SS G_CDS: 0.07 Total: -4.86 kcal Atomic # 14 Polarization: 19.47 SS G_CDS: -5.02 Total: 14.45 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -32.80 -7.04 -39.84 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000882471473.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.578 kcal (2) G-P(sol) polarization free energy of solvation -32.802 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.224 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.040 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.842 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.264 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds