Wall clock time and date at job start Tue Mar 31 2020 05:12:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13597 * 1 3 3 C 1.43199 * 179.97438 * 2 1 4 4 C 1.39940 * 119.95431 * 167.68780 * 3 2 1 5 5 C 1.36486 * 120.30180 * 180.02562 * 4 3 2 6 6 C 1.39795 * 120.21550 * 0.02570 * 5 4 3 7 7 C 1.47555 * 120.04429 * 179.97438 * 6 5 4 8 8 C 1.39251 * 120.28102 * 65.02399 * 7 6 5 9 9 C 1.38032 * 120.16340 * 180.02562 * 8 7 6 10 10 C 1.38887 * 120.73907 * 359.97438 * 9 8 7 11 11 C 1.37680 * 120.55965 * 0.02562 * 10 9 8 12 12 F 1.35097 * 120.09246 * 180.02562 * 11 10 9 13 13 C 1.41062 * 119.81073 * 359.72032 * 11 10 9 14 14 C 1.40677 * 120.36055 * 180.27489 * 13 11 10 15 15 H 1.08000 * 119.99684 * 143.73794 * 14 13 11 16 16 C 1.40103 * 120.00325 * 323.74125 * 14 13 11 17 17 N 1.30781 * 119.99741 * 339.64233 * 16 14 13 18 18 Si 1.86792 * 120.00219 * 159.63729 * 16 14 13 19 19 H 1.48504 * 109.47439 * 0.02562 * 18 16 14 20 20 H 1.48507 * 109.47273 * 120.00294 * 18 16 14 21 21 H 1.48506 * 109.47466 * 240.00110 * 18 16 14 22 22 C 1.40502 * 119.90915 * 359.97438 * 6 5 4 23 23 N 1.39319 * 120.15221 * 180.02562 * 22 6 5 24 24 C 1.38463 * 119.70177 * 0.27741 * 22 6 5 25 25 H 1.08001 * 119.85230 * 359.97438 * 4 3 2 26 26 H 1.07997 * 119.89684 * 179.97438 * 5 4 3 27 27 H 1.07998 * 119.91906 * 0.02562 * 8 7 6 28 28 H 1.08000 * 119.62783 * 180.02562 * 9 8 7 29 29 H 1.08004 * 119.71707 * 179.97438 * 10 9 8 30 30 H 0.96994 * 119.99969 * 179.97438 * 17 16 14 31 31 H 0.97007 * 119.99535 * 359.97438 * 23 22 6 32 32 H 0.96998 * 120.00326 * 180.02562 * 23 22 6 33 33 H 1.08001 * 120.10337 * 179.69860 * 24 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2662 1.1855 -0.2585 5 6 4.6310 1.1941 -0.2608 6 6 5.3424 0.0182 -0.0052 7 6 6.8178 0.0316 -0.0092 8 6 7.5159 0.7661 0.9460 9 6 8.8962 0.7774 0.9397 10 6 9.6076 0.0603 -0.0134 11 6 8.9481 -0.6761 -0.9717 12 9 9.6496 -1.3707 -1.8940 13 6 7.5379 -0.7086 -0.9837 14 6 6.8522 -1.4618 -1.9540 15 1 5.9378 -1.9739 -1.6932 16 6 7.3555 -1.5478 -3.2587 17 7 8.2007 -0.6497 -3.6939 18 14 6.8195 -2.9451 -4.3764 19 1 5.8642 -3.8207 -3.6511 20 1 6.1600 -2.3875 -5.5845 21 1 8.0078 -3.7378 -4.7826 22 6 4.6504 -1.1766 0.2555 23 7 5.3543 -2.3513 0.5114 24 6 3.2658 -1.1823 0.2517 25 1 2.7226 2.0972 -0.4580 26 1 5.1632 2.1122 -0.4616 27 1 6.9760 1.3283 1.6936 28 1 9.4288 1.3497 1.6848 29 1 10.6874 0.0811 -0.0032 30 1 8.5495 -0.7094 -4.5970 31 1 6.3243 -2.3457 0.5095 32 1 4.8744 -3.1750 0.6907 33 1 2.7274 -2.0980 0.4465 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001244093389.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:12:35 Heat of formation + Delta-G solvation = 26.645362 kcal Electronic energy + Delta-G solvation = -21042.913409 eV Core-core repulsion = 17754.417149 eV Total energy + Delta-G solvation = -3288.496260 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 282.086 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -47.08430 -39.38722 -37.27657 -36.11998 -34.14213 -33.66206 -31.72977 -29.80058 -28.89905 -27.86975 -25.43260 -23.57010 -21.84567 -20.99939 -20.31934 -18.47254 -17.56857 -16.50746 -16.28188 -15.42714 -15.04019 -14.67232 -14.44681 -14.25465 -13.94630 -13.80772 -13.70308 -13.34043 -12.95991 -12.67891 -12.47769 -12.38498 -11.90586 -11.65161 -11.47292 -11.37129 -11.10343 -10.97045 -10.75308 -10.60159 -10.24574 -10.07264 -9.55834 -9.17090 -8.42162 -7.66900 -7.33474 -6.95361 -6.89605 -4.55707 1.20481 2.06946 2.45641 2.63411 2.91209 3.03536 3.06338 3.07439 3.38054 3.86185 4.15443 4.37700 4.46943 4.55719 5.13766 5.32504 5.52132 5.57820 5.87947 5.93475 5.97584 6.10561 6.29781 6.31403 6.46936 6.62773 6.76667 6.87855 7.01186 7.03999 7.17395 7.36328 7.46306 7.64577 7.69911 7.74409 7.99353 8.02030 8.29043 8.33672 8.60856 8.70179 10.03737 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.015447 B = 0.006988 C = 0.005422 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1812.197484 B = 4005.633045 C = 5163.365540 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.449 5.449 2 C 0.272 3.728 3 C -0.016 4.016 4 C -0.126 4.126 5 C -0.076 4.076 6 C -0.016 4.016 7 C -0.161 4.161 8 C -0.078 4.078 9 C -0.217 4.217 10 C -0.132 4.132 11 C 0.038 3.962 12 F -0.143 7.143 13 C 0.102 3.898 14 C -0.458 4.458 15 H 0.097 0.903 16 C 0.081 3.919 17 N -0.767 5.767 18 Si 0.903 3.097 19 H -0.259 1.259 20 H -0.274 1.274 21 H -0.271 1.271 22 C 0.225 3.775 23 N -0.863 5.863 24 C -0.157 4.157 25 H 0.119 0.881 26 H 0.127 0.873 27 H 0.098 0.902 28 H 0.098 0.902 29 H 0.100 0.900 30 H 0.284 0.716 31 H 0.409 0.591 32 H 0.390 0.610 33 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.663 -0.694 5.050 5.362 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.125 5.125 2 C -0.042 4.042 3 C -0.020 4.020 4 C -0.149 4.149 5 C -0.095 4.095 6 C -0.022 4.022 7 C -0.163 4.163 8 C -0.096 4.096 9 C -0.237 4.237 10 C -0.151 4.151 11 C 0.017 3.983 12 F -0.122 7.122 13 C 0.098 3.902 14 C -0.486 4.486 15 H 0.115 0.885 16 C -0.142 4.142 17 N -0.389 5.389 18 Si 0.728 3.272 19 H -0.182 1.182 20 H -0.200 1.200 21 H -0.197 1.197 22 C 0.119 3.881 23 N -0.402 5.402 24 C -0.183 4.183 25 H 0.137 0.863 26 H 0.145 0.855 27 H 0.116 0.884 28 H 0.117 0.883 29 H 0.118 0.882 30 H 0.095 0.905 31 H 0.241 0.759 32 H 0.218 0.782 33 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -3.268 -0.625 4.788 5.830 hybrid contribution 0.725 -0.928 -0.899 1.482 sum -2.543 -1.554 3.889 4.900 Atomic orbital electron populations 1.81171 1.12367 1.08537 1.10450 1.25948 0.92873 0.92722 0.92684 1.15639 0.83314 0.95200 1.07824 1.20422 0.94251 0.96138 1.04095 1.20698 0.92725 0.97897 0.98143 1.18415 0.92834 0.91114 0.99824 1.18261 0.89787 1.05642 1.02599 1.20635 0.93618 0.98168 0.97205 1.20061 0.93604 1.07416 1.02591 1.20670 0.98416 0.99335 0.96686 1.17772 0.89902 1.00257 0.90323 1.91338 1.78472 1.77236 1.65167 1.17478 0.89496 0.90966 0.92249 1.19562 1.09245 1.26451 0.93363 0.88506 1.25862 0.93472 0.95722 0.99096 1.69743 1.22152 1.29198 1.17836 0.86315 0.79471 0.81650 0.79804 1.18247 1.19959 1.19650 1.17592 0.89848 0.87401 0.93278 1.42491 1.09976 1.07773 1.79927 1.20292 0.92078 0.97033 1.08899 0.86266 0.85515 0.88385 0.88346 0.88225 0.90468 0.75926 0.78236 0.86104 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.45 -7.53 18.54 41.84 0.78 -6.75 16 2 C 0.27 4.17 15.31 -22.47 -0.34 3.82 16 3 C -0.02 -0.23 5.74 -106.81 -0.61 -0.85 16 4 C -0.13 -1.84 9.68 -39.58 -0.38 -2.23 16 5 C -0.08 -1.23 9.66 -39.63 -0.38 -1.62 16 6 C -0.02 -0.30 4.72 -104.66 -0.49 -0.79 16 7 C -0.16 -3.26 4.56 -104.29 -0.48 -3.74 16 8 C -0.08 -1.48 9.71 -39.28 -0.38 -1.86 16 9 C -0.22 -4.17 10.02 -39.42 -0.40 -4.57 16 10 C -0.13 -2.77 9.99 -39.54 -0.39 -3.17 16 11 C 0.04 0.89 6.68 -38.72 -0.26 0.64 16 12 F -0.14 -3.60 14.25 2.25 0.03 -3.57 16 13 C 0.10 2.33 4.54 -106.47 -0.48 1.85 16 14 C -0.46 -10.70 7.62 -37.96 -0.29 -10.99 16 15 H 0.10 2.16 5.47 -52.49 -0.29 1.87 16 16 C 0.08 1.91 4.50 -17.30 -0.08 1.83 16 17 N -0.77 -19.12 11.12 55.56 0.62 -18.50 16 18 Si 0.90 18.16 29.61 -169.99 -5.03 13.12 16 19 H -0.26 -5.09 7.11 56.52 0.40 -4.69 16 20 H -0.27 -5.49 7.11 56.52 0.40 -5.09 16 21 H -0.27 -5.47 7.11 56.52 0.40 -5.07 16 22 C 0.23 3.68 5.64 -83.52 -0.47 3.21 16 23 N -0.86 -12.87 7.71 32.57 0.25 -12.62 16 24 C -0.16 -2.32 9.59 -38.98 -0.37 -2.69 16 25 H 0.12 1.48 8.06 -52.49 -0.42 1.06 16 26 H 0.13 1.96 8.06 -52.49 -0.42 1.54 16 27 H 0.10 1.63 8.06 -52.49 -0.42 1.21 16 28 H 0.10 1.64 8.06 -52.49 -0.42 1.22 16 29 H 0.10 1.91 8.06 -52.48 -0.42 1.49 16 30 H 0.28 6.56 8.29 -40.82 -0.34 6.22 16 31 H 0.41 6.76 6.58 -40.82 -0.27 6.49 16 32 H 0.39 4.61 8.84 -40.82 -0.36 4.25 16 33 H 0.12 1.53 8.06 -52.49 -0.42 1.11 16 LS Contribution 298.05 15.07 4.49 4.49 Total: -1.00 -26.11 298.05 -7.27 -33.38 By element: Atomic # 1 Polarization: 14.19 SS G_CDS: -2.59 Total: 11.60 kcal Atomic # 6 Polarization: -15.33 SS G_CDS: -5.82 Total: -21.15 kcal Atomic # 7 Polarization: -39.52 SS G_CDS: 1.64 Total: -37.87 kcal Atomic # 9 Polarization: -3.60 SS G_CDS: 0.03 Total: -3.57 kcal Atomic # 14 Polarization: 18.16 SS G_CDS: -5.03 Total: 13.12 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -26.11 -7.27 -33.38 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001244093389.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.024 kcal (2) G-P(sol) polarization free energy of solvation -26.108 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.917 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.271 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.379 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.645 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds