Wall clock time and date at job start Tue Mar 31 2020 05:11:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13595 * 1 3 3 C 1.43203 * 179.97438 * 2 1 4 4 C 1.39813 * 120.07658 * 339.60298 * 3 2 1 5 5 C 1.37641 * 119.92722 * 180.02562 * 4 3 2 6 6 C 1.39192 * 120.07167 * 359.97438 * 5 4 3 7 7 N 1.39224 * 119.92437 * 180.02562 * 6 5 4 8 8 C 1.39807 * 119.99840 * 148.79089 * 7 6 5 9 9 C 1.39427 * 119.91477 * 154.21123 * 8 7 6 10 10 C 1.38352 * 120.46037 * 180.22759 * 9 8 7 11 11 C 1.38009 * 120.29492 * 359.48716 * 10 9 8 12 12 F 1.35107 * 120.09262 * 180.23132 * 11 10 9 13 13 C 1.41018 * 119.82063 * 0.51079 * 11 10 9 14 14 C 1.41293 * 120.22452 * 179.76996 * 13 11 10 15 15 H 1.08004 * 120.00125 * 331.25265 * 14 13 11 16 16 C 1.39922 * 120.00091 * 151.26274 * 14 13 11 17 17 N 1.30851 * 119.99529 * 341.63435 * 16 14 13 18 18 Si 1.86793 * 119.99965 * 161.63723 * 16 14 13 19 19 H 1.48495 * 109.47660 * 359.97438 * 18 16 14 20 20 H 1.48506 * 109.47279 * 119.99976 * 18 16 14 21 21 H 1.48502 * 109.47140 * 239.99341 * 18 16 14 22 22 C 1.38187 * 119.91789 * 334.18384 * 8 7 6 23 23 C 1.39196 * 120.15089 * 0.28102 * 6 5 4 24 24 C 1.37644 * 120.07334 * 359.44573 * 23 6 5 25 25 H 1.08001 * 120.03721 * 359.97438 * 4 3 2 26 26 H 1.08002 * 119.96357 * 179.97438 * 5 4 3 27 27 H 0.96998 * 119.99739 * 328.78433 * 7 6 5 28 28 H 1.07997 * 119.76826 * 359.95592 * 9 8 7 29 29 H 1.08009 * 119.85031 * 179.72153 * 10 9 8 30 30 H 0.97003 * 119.99729 * 180.02562 * 17 16 14 31 31 H 1.08004 * 120.14424 * 0.02562 * 22 8 7 32 32 H 1.08003 * 119.96322 * 179.72444 * 23 6 5 33 33 H 1.07999 * 120.03961 * 180.29454 * 24 23 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2692 -1.1331 0.4217 5 6 4.6456 -1.1289 0.4209 6 6 5.3394 0.0021 0.0005 7 7 6.7316 0.0028 0.0005 8 6 7.4303 0.7551 -0.9485 9 6 8.7201 1.2039 -0.6676 10 6 9.4199 1.9532 -1.5966 11 6 8.8517 2.2558 -2.8173 12 9 9.5406 2.9838 -3.7233 13 6 7.5479 1.8081 -3.1142 14 6 6.9561 2.1171 -4.3595 15 1 7.2377 3.0193 -4.8822 16 6 6.0051 1.2544 -4.9155 17 7 5.9184 0.0182 -4.4954 18 14 4.8593 1.8674 -6.2574 19 1 5.1582 3.2920 -6.5509 20 1 5.0569 1.0564 -7.4857 21 1 3.4515 1.7410 -5.8021 22 6 6.8409 1.0515 -2.1628 23 6 4.6445 1.1344 -0.4149 24 6 3.2680 1.1350 -0.4220 25 1 2.7314 -2.0108 0.7484 26 1 5.1878 -2.0042 0.7469 27 1 7.2168 -0.5186 0.6589 28 1 9.1743 0.9688 0.2836 29 1 10.4168 2.2996 -1.3668 30 1 5.2594 -0.5801 -4.8811 31 1 5.8418 0.7037 -2.3800 32 1 5.1859 2.0119 -0.7364 33 1 2.7294 2.0121 -0.7489 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001249713376.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:11:38 Heat of formation + Delta-G solvation = 26.195502 kcal Electronic energy + Delta-G solvation = -20529.094591 eV Core-core repulsion = 17240.578824 eV Total energy + Delta-G solvation = -3288.515767 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 282.086 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -47.26995 -39.71755 -37.81611 -36.29966 -34.82961 -33.59849 -31.00094 -30.26819 -29.60626 -27.50913 -25.48775 -23.13402 -22.69821 -21.36868 -20.39425 -18.68379 -17.79829 -17.11248 -16.11509 -15.95495 -15.19645 -14.89050 -14.42359 -14.26395 -14.03818 -13.84611 -13.47962 -13.35227 -13.17802 -12.90541 -12.60933 -12.24574 -12.06176 -11.97822 -11.75699 -11.60633 -11.34679 -11.13419 -10.90243 -10.64357 -10.30457 -9.96370 -9.61829 -9.32054 -8.85355 -8.11419 -7.71700 -6.97757 -6.54669 -4.56583 1.04329 1.57483 2.53890 2.62337 2.84986 3.01877 3.03992 3.07965 3.22199 3.74732 3.83423 4.11068 4.17589 4.40960 5.01019 5.03677 5.30565 5.46460 5.65684 5.75848 5.80508 5.95191 6.11271 6.26169 6.26869 6.48786 6.54588 6.66166 6.76088 6.85217 7.00237 7.07615 7.35468 7.47378 7.67848 7.69117 7.81152 7.97499 8.16246 8.43612 8.60659 8.68294 9.99897 Molecular weight = 282.09amu Principal moments of inertia in cm(-1) A = 0.013584 B = 0.006491 C = 0.004731 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2060.745691 B = 4312.743291 C = 5916.967763 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.449 5.449 2 C 0.271 3.729 3 C -0.095 4.095 4 C -0.033 4.033 5 C -0.185 4.185 6 C 0.241 3.759 7 N -0.677 5.677 8 C 0.166 3.834 9 C -0.254 4.254 10 C -0.098 4.098 11 C -0.042 4.042 12 F -0.163 7.163 13 C 0.109 3.891 14 C -0.453 4.453 15 H 0.085 0.915 16 C 0.080 3.920 17 N -0.779 5.779 18 Si 0.906 3.094 19 H -0.258 1.258 20 H -0.273 1.273 21 H -0.269 1.269 22 C -0.184 4.184 23 C -0.162 4.162 24 C -0.033 4.033 25 H 0.127 0.873 26 H 0.129 0.871 27 H 0.403 0.597 28 H 0.100 0.900 29 H 0.104 0.896 30 H 0.284 0.716 31 H 0.132 0.868 32 H 0.142 0.858 33 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.076 -1.964 7.613 7.935 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.126 5.126 2 C -0.043 4.043 3 C -0.101 4.101 4 C -0.054 4.054 5 C -0.207 4.207 6 C 0.137 3.863 7 N -0.297 5.297 8 C 0.071 3.929 9 C -0.276 4.276 10 C -0.118 4.118 11 C -0.063 4.063 12 F -0.142 7.142 13 C 0.105 3.895 14 C -0.481 4.481 15 H 0.103 0.897 16 C -0.140 4.140 17 N -0.403 5.403 18 Si 0.729 3.271 19 H -0.181 1.181 20 H -0.198 1.198 21 H -0.193 1.193 22 C -0.206 4.206 23 C -0.183 4.183 24 C -0.054 4.054 25 H 0.145 0.855 26 H 0.147 0.853 27 H 0.238 0.762 28 H 0.118 0.882 29 H 0.122 0.878 30 H 0.095 0.905 31 H 0.150 0.850 32 H 0.159 0.841 33 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -2.901 -2.088 7.430 8.245 hybrid contribution 0.368 -0.053 -0.589 0.696 sum -2.533 -2.141 6.841 7.603 Atomic orbital electron populations 1.81194 1.12298 1.08341 1.10724 1.25805 0.92712 0.93103 0.92694 1.15828 0.83931 0.97623 1.12700 1.20764 0.93409 0.96026 0.95238 1.20653 0.93724 0.97205 1.09132 1.17975 0.83835 0.92330 0.92191 1.42118 1.02273 1.51003 1.34320 1.17592 0.91899 0.94770 0.88594 1.19763 0.96245 1.11082 1.00476 1.20282 0.98764 0.99837 0.92892 1.17885 0.92323 1.06764 0.89309 1.91277 1.79250 1.76363 1.67349 1.17380 0.88459 0.90264 0.93401 1.19529 1.18591 1.06974 1.03037 0.89669 1.25880 0.96418 0.93911 0.97787 1.69812 1.28980 1.04075 1.37451 0.86281 0.80018 0.80587 0.80184 1.18123 1.19778 1.19348 1.20904 1.01800 1.07625 0.90247 1.21056 0.93553 0.98382 1.05343 1.20906 0.93615 0.96345 0.94525 0.85518 0.85328 0.76179 0.88217 0.87754 0.90504 0.84997 0.84073 0.85327 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.45 -7.31 18.54 41.84 0.78 -6.53 16 2 C 0.27 3.92 15.33 -22.47 -0.34 3.58 16 3 C -0.10 -1.28 5.74 -106.79 -0.61 -1.89 16 4 C -0.03 -0.39 9.75 -39.21 -0.38 -0.78 16 5 C -0.19 -2.31 9.93 -39.45 -0.39 -2.71 16 6 C 0.24 3.61 5.91 -83.79 -0.50 3.11 16 7 N -0.68 -10.58 5.44 -8.43 -0.05 -10.62 16 8 C 0.17 3.25 6.03 -83.80 -0.51 2.75 16 9 C -0.25 -4.86 9.94 -39.10 -0.39 -5.25 16 10 C -0.10 -2.03 10.00 -39.62 -0.40 -2.43 16 11 C -0.04 -1.01 7.31 -38.61 -0.28 -1.29 16 12 F -0.16 -3.94 16.75 2.25 0.04 -3.90 16 13 C 0.11 2.70 5.52 -106.78 -0.59 2.11 16 14 C -0.45 -11.42 8.72 -37.79 -0.33 -11.74 16 15 H 0.09 2.15 7.81 -52.48 -0.41 1.74 16 16 C 0.08 1.89 5.09 -17.34 -0.09 1.81 16 17 N -0.78 -18.82 11.29 55.55 0.63 -18.19 16 18 Si 0.91 17.93 29.60 -169.99 -5.03 12.90 16 19 H -0.26 -5.09 7.11 56.52 0.40 -4.69 16 20 H -0.27 -5.35 7.11 56.52 0.40 -4.95 16 21 H -0.27 -5.23 7.11 56.52 0.40 -4.83 16 22 C -0.18 -4.15 6.46 -38.70 -0.25 -4.40 16 23 C -0.16 -2.52 7.71 -39.44 -0.30 -2.82 16 24 C -0.03 -0.45 9.75 -39.21 -0.38 -0.84 16 25 H 0.13 1.21 8.06 -52.49 -0.42 0.79 16 26 H 0.13 1.32 8.06 -52.49 -0.42 0.89 16 27 H 0.40 5.10 8.89 -40.82 -0.36 4.74 16 28 H 0.10 1.62 8.06 -52.49 -0.42 1.20 16 29 H 0.10 1.90 8.06 -52.48 -0.42 1.48 16 30 H 0.28 6.29 8.30 -40.82 -0.34 5.95 16 31 H 0.13 3.07 4.76 -52.48 -0.25 2.82 16 32 H 0.14 2.40 6.54 -52.48 -0.34 2.06 16 33 H 0.13 1.59 8.06 -52.49 -0.42 1.17 16 LS Contribution 302.70 15.07 4.56 4.56 Total: -1.00 -26.78 302.70 -7.43 -34.22 By element: Atomic # 1 Polarization: 10.97 SS G_CDS: -2.61 Total: 8.36 kcal Atomic # 6 Polarization: -15.05 SS G_CDS: -5.74 Total: -20.79 kcal Atomic # 7 Polarization: -36.70 SS G_CDS: 1.36 Total: -35.35 kcal Atomic # 9 Polarization: -3.94 SS G_CDS: 0.04 Total: -3.90 kcal Atomic # 14 Polarization: 17.93 SS G_CDS: -5.03 Total: 12.90 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -26.78 -7.43 -34.22 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001249713376.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.412 kcal (2) G-P(sol) polarization free energy of solvation -26.784 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.628 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.432 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.216 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.196 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds