Wall clock time and date at job start Tue Mar 31 2020 05:40:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46903 * 1 3 3 C 1.46894 * 110.99891 * 2 1 4 4 C 1.50696 * 109.47510 * 66.04555 * 3 2 1 5 5 H 1.08002 * 119.99787 * 0.02562 * 4 3 2 6 6 C 1.37874 * 120.00619 * 180.02562 * 4 3 2 7 7 N 1.31513 * 119.99779 * 359.97438 * 6 4 3 8 8 Si 1.86800 * 120.00259 * 180.02562 * 6 4 3 9 9 H 1.48500 * 109.47149 * 60.00009 * 8 6 4 10 10 H 1.48502 * 109.47038 * 179.97438 * 8 6 4 11 11 H 1.48494 * 109.47110 * 299.99993 * 8 6 4 12 12 C 1.46899 * 110.99672 * 236.04536 * 2 1 3 13 13 C 1.50698 * 109.47470 * 293.95020 * 12 2 1 14 14 C 1.38242 * 120.00070 * 104.99822 * 13 12 2 15 15 C 1.38224 * 120.00951 * 179.70212 * 14 13 12 16 16 C 1.38264 * 120.01600 * 0.28256 * 15 14 13 17 17 C 1.38198 * 120.01410 * 0.02562 * 16 15 14 18 18 C 1.38299 * 120.00769 * 285.26009 * 13 12 2 19 19 Br 1.89103 * 120.01247 * 0.04165 * 18 13 12 20 20 H 1.09004 * 109.47061 * 183.95204 * 1 2 3 21 21 H 1.09003 * 109.47190 * 303.95267 * 1 2 3 22 22 H 1.08997 * 109.47161 * 63.95421 * 1 2 3 23 23 H 1.08998 * 109.47007 * 186.04797 * 3 2 1 24 24 H 1.09000 * 109.47390 * 306.04414 * 3 2 1 25 25 H 0.96997 * 120.00378 * 179.97438 * 7 6 4 26 26 H 1.09001 * 109.46772 * 173.95513 * 12 2 1 27 27 H 1.09000 * 109.47321 * 53.95923 * 12 2 1 28 28 H 1.08002 * 119.99955 * 359.97438 * 14 13 12 29 29 H 1.07991 * 119.99277 * 180.25949 * 15 14 13 30 30 H 1.08005 * 119.99203 * 179.97438 * 16 15 14 31 31 H 1.08001 * 120.00771 * 180.02562 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.6369 2.0471 1.2984 5 1 1.0746 1.5112 2.0488 6 6 2.0267 3.3495 1.5284 7 7 2.7119 4.0019 0.6149 8 14 1.5829 4.1868 3.1382 9 1 2.1757 3.4297 4.2699 10 1 2.1150 5.5732 3.1381 11 1 0.1058 4.2229 3.2866 12 6 1.9954 -0.7660 -1.1376 13 6 1.6370 -2.2204 -0.9729 14 6 0.6297 -2.7753 -1.7401 15 6 0.3049 -4.1108 -1.5935 16 6 0.9834 -4.8909 -0.6754 17 6 1.9862 -4.3355 0.0965 18 6 2.3119 -2.9989 -0.0504 19 35 3.6841 -2.2384 1.0055 20 1 -0.3633 -1.0253 0.0708 21 1 -0.3634 0.5740 0.8525 22 1 -0.3633 0.4512 -0.9233 23 1 3.0797 1.3443 -0.1083 24 1 1.5611 1.9273 -0.8309 25 1 2.9858 4.9182 0.7765 26 1 3.0797 -0.6611 -1.1756 27 1 1.5611 -0.3872 -2.0628 28 1 0.0994 -2.1663 -2.4572 29 1 -0.4791 -4.5450 -2.1959 30 1 0.7290 -5.9343 -0.5609 31 1 2.5163 -4.9450 0.8133 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000019834153.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:40:36 Heat of formation + Delta-G solvation = 30.935280 kcal Electronic energy + Delta-G solvation = -14589.611520 eV Core-core repulsion = 12110.182393 eV Total energy + Delta-G solvation = -2479.429128 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 283.027 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -39.33857 -36.33108 -32.76026 -32.03373 -31.20791 -28.97209 -27.12748 -26.52660 -23.81913 -22.32020 -21.31019 -20.02116 -16.67669 -16.15691 -15.47878 -15.06624 -14.80546 -14.17146 -13.77129 -13.44629 -13.31129 -12.77040 -12.40715 -11.88781 -11.51449 -11.19506 -11.10467 -10.92210 -10.84701 -10.60965 -10.49124 -10.38832 -9.86394 -9.55406 -9.19829 -8.76179 -8.42215 -8.36205 -7.18313 -5.98215 -3.98644 1.26081 1.38924 2.08591 3.36455 3.40180 3.43612 3.72533 4.46876 4.85071 4.92188 4.99829 5.22929 5.36072 5.38033 5.51180 5.73291 5.86006 5.98312 6.16202 6.26141 6.32064 6.35509 6.46383 6.60411 6.79132 6.91674 7.33164 7.37153 7.83979 8.12583 8.24073 8.58505 9.08504 9.64888 11.12742 Molecular weight = 283.03amu Principal moments of inertia in cm(-1) A = 0.025197 B = 0.006164 C = 0.005417 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1110.993502 B = 4541.196438 C = 5167.279993 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 N -0.524 5.524 3 C 0.196 3.804 4 C -0.502 4.502 5 H 0.063 0.937 6 C 0.055 3.945 7 N -0.900 5.900 8 Si 0.896 3.104 9 H -0.276 1.276 10 H -0.288 1.288 11 H -0.278 1.278 12 C 0.082 3.918 13 C -0.038 4.038 14 C -0.113 4.113 15 C -0.111 4.111 16 C -0.126 4.126 17 C -0.098 4.098 18 C -0.069 4.069 19 Br -0.032 7.032 20 H 0.043 0.957 21 H 0.074 0.926 22 H 0.009 0.991 23 H 0.031 0.969 24 H -0.011 1.011 25 H 0.261 0.739 26 H 0.085 0.915 27 H 0.034 0.966 28 H 0.125 0.875 29 H 0.123 0.877 30 H 0.124 0.876 31 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.316 -17.053 -3.641 17.487 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 N -0.248 5.248 3 C 0.071 3.929 4 C -0.541 4.541 5 H 0.081 0.919 6 C -0.146 4.146 7 N -0.540 5.540 8 Si 0.724 3.276 9 H -0.202 1.202 10 H -0.214 1.214 11 H -0.203 1.203 12 C -0.046 4.046 13 C -0.040 4.040 14 C -0.133 4.133 15 C -0.130 4.130 16 C -0.145 4.145 17 C -0.118 4.118 18 C -0.150 4.150 19 Br 0.054 6.946 20 H 0.062 0.938 21 H 0.093 0.907 22 H 0.028 0.972 23 H 0.049 0.951 24 H 0.007 0.993 25 H 0.070 0.930 26 H 0.103 0.897 27 H 0.052 0.948 28 H 0.143 0.857 29 H 0.141 0.859 30 H 0.142 0.858 31 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -0.534 -16.780 -2.835 17.026 hybrid contribution -0.840 0.769 -0.154 1.149 sum -1.375 -16.011 -2.989 16.346 Atomic orbital electron populations 1.22238 0.89040 0.99457 1.00424 1.62145 1.06675 1.17626 1.38347 1.19712 0.95480 0.81125 0.96558 1.21099 1.34619 0.96719 1.01625 0.91917 1.24964 0.95396 0.97355 0.96867 1.69946 1.38511 1.11441 1.34093 0.86587 0.78650 0.78321 0.84005 1.20191 1.21421 1.20344 1.21160 1.01163 0.88539 0.93739 1.19967 0.94139 0.96262 0.93657 1.21096 0.97079 0.95246 0.99850 1.21167 0.99524 0.93982 0.98324 1.21052 0.96649 0.99875 0.96912 1.21097 0.97833 0.93320 0.99561 1.21780 0.99136 0.95038 0.98997 1.96763 1.45674 1.84508 1.67626 0.93816 0.90681 0.97225 0.95061 0.99285 0.92957 0.89685 0.94839 0.85692 0.85927 0.85763 0.85456 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.74 9.16 60.07 0.55 1.29 16 2 N -0.52 -11.33 4.48 -245.83 -1.10 -12.43 16 3 C 0.20 5.11 4.72 -4.98 -0.02 5.09 16 4 C -0.50 -14.16 8.46 -34.44 -0.29 -14.45 16 5 H 0.06 1.76 7.12 -52.49 -0.37 1.39 16 6 C 0.06 1.57 5.46 -17.82 -0.10 1.48 16 7 N -0.90 -26.90 13.29 55.43 0.74 -26.17 16 8 Si 0.90 21.91 29.54 -169.99 -5.02 16.89 16 9 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 10 H -0.29 -6.98 7.11 56.52 0.40 -6.57 16 11 H -0.28 -6.66 7.11 56.52 0.40 -6.26 16 12 C 0.08 1.51 4.36 -4.98 -0.02 1.49 16 13 C -0.04 -0.60 4.42 -104.60 -0.46 -1.07 16 14 C -0.11 -1.52 9.12 -39.59 -0.36 -1.88 16 15 C -0.11 -1.26 10.05 -39.58 -0.40 -1.66 16 16 C -0.13 -1.40 10.05 -39.59 -0.40 -1.80 16 17 C -0.10 -1.27 9.79 -39.55 -0.39 -1.66 16 18 C -0.07 -1.08 6.22 -39.52 -0.25 -1.33 16 19 Br -0.03 -0.54 31.92 -68.01 -2.17 -2.71 16 20 H 0.04 0.78 6.88 -51.93 -0.36 0.42 16 21 H 0.07 1.61 6.76 -51.93 -0.35 1.26 16 22 H 0.01 0.18 8.14 -51.93 -0.42 -0.24 16 23 H 0.03 0.87 7.93 -51.93 -0.41 0.46 16 24 H -0.01 -0.30 8.12 -51.93 -0.42 -0.72 16 25 H 0.26 7.41 8.31 -40.82 -0.34 7.07 16 26 H 0.08 1.62 7.21 -51.93 -0.37 1.24 16 27 H 0.03 0.59 7.93 -51.93 -0.41 0.18 16 28 H 0.13 1.51 8.00 -52.49 -0.42 1.09 16 29 H 0.12 1.05 8.06 -52.49 -0.42 0.63 16 30 H 0.12 1.03 8.06 -52.48 -0.42 0.61 16 31 H 0.13 1.42 8.06 -52.49 -0.42 0.99 16 LS Contribution 282.92 15.07 4.26 4.26 Total: -1.00 -30.03 282.92 -9.38 -39.41 By element: Atomic # 1 Polarization: -0.81 SS G_CDS: -3.95 Total: -4.76 kcal Atomic # 6 Polarization: -12.35 SS G_CDS: -2.14 Total: -14.49 kcal Atomic # 7 Polarization: -38.24 SS G_CDS: -0.36 Total: -38.60 kcal Atomic # 14 Polarization: 21.91 SS G_CDS: -5.02 Total: 16.89 kcal Atomic # 35 Polarization: -0.54 SS G_CDS: -2.17 Total: -2.71 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -30.03 -9.38 -39.41 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000019834153.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.343 kcal (2) G-P(sol) polarization free energy of solvation -30.032 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.311 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.376 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.408 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.935 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds