Wall clock time and date at job start Tue Mar 31 2020 05:19:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.34775 * 120.00736 * 2 1 4 4 O 1.21740 * 120.00442 * 185.33780 * 3 2 1 5 5 C 1.46151 * 119.99330 * 5.33415 * 3 2 1 6 6 H 1.08003 * 120.00373 * 5.20539 * 5 3 2 7 7 C 1.40129 * 119.99666 * 185.20555 * 5 3 2 8 8 N 1.30637 * 120.00257 * 354.93242 * 7 5 3 9 9 Si 1.86800 * 119.99772 * 174.92692 * 7 5 3 10 10 H 1.48509 * 109.47170 * 95.00138 * 9 7 5 11 11 H 1.48502 * 109.47256 * 214.99802 * 9 7 5 12 12 H 1.48500 * 109.47440 * 335.00453 * 9 7 5 13 13 C 1.39542 * 119.99875 * 179.97438 * 2 1 3 14 14 C 1.39037 * 120.07331 * 294.55703 * 13 2 1 15 15 C 1.38043 * 119.92616 * 180.27518 * 14 13 2 16 16 C 1.38424 * 120.07496 * 359.48911 * 15 14 13 17 17 Br 1.89097 * 119.93086 * 180.23476 * 16 15 14 18 18 C 1.38420 * 120.14406 * 0.50828 * 16 15 14 19 19 C 1.38052 * 120.07483 * 359.74965 * 18 16 15 20 20 H 1.08999 * 109.47158 * 270.00233 * 1 2 3 21 21 H 1.08999 * 109.46561 * 30.00449 * 1 2 3 22 22 H 1.09000 * 109.47299 * 150.00068 * 1 2 3 23 23 H 0.96996 * 120.00325 * 180.02562 * 8 7 5 24 24 H 1.08002 * 120.03662 * 359.97438 * 14 13 2 25 25 H 1.08005 * 119.96404 * 179.72337 * 15 14 13 26 26 H 1.08004 * 119.96678 * 179.72675 * 18 16 15 27 27 H 1.07997 * 120.03653 * 179.97438 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1390 1.1671 0.0000 4 8 3.3525 1.1693 -0.0981 5 6 1.4130 2.4301 0.1177 6 1 0.3467 2.4261 0.2889 7 6 2.1006 3.6462 0.0083 8 7 3.4025 3.6532 -0.0996 9 14 1.1554 5.2574 0.0166 10 1 1.1244 5.8061 1.3962 11 1 1.8237 6.2280 -0.8871 12 1 -0.2332 5.0192 -0.4527 13 6 2.1627 -1.2085 0.0005 14 6 2.0780 -2.0614 1.0953 15 6 2.7739 -3.2535 1.0950 16 6 3.5472 -3.6051 0.0020 17 35 4.4936 -5.2422 0.0032 18 6 3.6336 -2.7583 -1.0896 19 6 2.9444 -1.5622 -1.0935 20 1 -0.3633 0.0000 1.0276 21 1 -0.3632 0.8900 -0.5139 22 1 -0.3634 -0.8900 -0.5138 23 1 3.8784 4.4950 -0.1749 24 1 1.4722 -1.7893 1.9470 25 1 2.7121 -3.9145 1.9470 26 1 4.2413 -3.0335 -1.9390 27 1 3.0126 -0.9018 -1.9453 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000077435412.mol2 27 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:19:11 Heat of formation + Delta-G solvation = -3.880905 kcal Electronic energy + Delta-G solvation = -14317.361466 eV Core-core repulsion = 11700.589501 eV Total energy + Delta-G solvation = -2616.771965 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 282.995 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -39.38041 -37.17666 -34.16041 -32.60291 -31.42417 -30.70464 -28.66348 -26.28611 -25.47804 -22.43054 -22.00655 -19.56030 -16.85674 -16.34925 -15.65217 -15.23269 -15.08237 -14.18269 -13.89985 -13.36723 -13.07672 -12.76767 -12.52096 -11.79268 -11.60997 -11.44849 -11.17972 -11.07337 -10.93916 -10.60028 -10.36711 -10.31562 -10.10716 -8.99070 -8.67823 -8.44525 -7.78616 -7.37347 -6.34790 -4.81075 1.47482 1.69819 1.86436 3.05784 3.13554 3.16992 3.93692 4.01096 4.31412 4.40745 5.13800 5.19862 5.55513 5.70858 5.75948 5.81637 5.96474 6.16584 6.33306 6.35935 6.41692 6.54976 6.96052 7.03118 7.30346 7.45998 8.02669 8.23996 8.86435 9.15085 10.39378 10.58237 Molecular weight = 282.99amu Principal moments of inertia in cm(-1) A = 0.053455 B = 0.004065 C = 0.003899 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 523.682185 B = 6886.366680 C = 7179.910173 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.102 3.898 2 N -0.611 5.611 3 C 0.552 3.448 4 O -0.564 6.564 5 C -0.538 4.538 6 H 0.075 0.925 7 C 0.086 3.914 8 N -0.761 5.761 9 Si 0.910 3.090 10 H -0.272 1.272 11 H -0.278 1.278 12 H -0.263 1.263 13 C 0.205 3.795 14 C -0.136 4.136 15 C -0.083 4.083 16 C -0.112 4.112 17 Br -0.073 7.073 18 C -0.081 4.081 19 C -0.107 4.107 20 H 0.038 0.962 21 H 0.080 0.920 22 H 0.046 0.954 23 H 0.271 0.729 24 H 0.128 0.872 25 H 0.127 0.873 26 H 0.127 0.873 27 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.726 -13.915 -0.102 14.180 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.041 4.041 2 N -0.345 5.345 3 C 0.359 3.641 4 O -0.445 6.445 5 C -0.574 4.574 6 H 0.093 0.907 7 C -0.135 4.135 8 N -0.389 5.389 9 Si 0.734 3.266 10 H -0.197 1.197 11 H -0.203 1.203 12 H -0.187 1.187 13 C 0.112 3.888 14 C -0.157 4.157 15 C -0.103 4.103 16 C -0.191 4.191 17 Br 0.012 6.988 18 C -0.101 4.101 19 C -0.128 4.128 20 H 0.057 0.943 21 H 0.098 0.902 22 H 0.065 0.935 23 H 0.082 0.918 24 H 0.145 0.855 25 H 0.145 0.855 26 H 0.145 0.855 27 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -1.548 -14.339 -0.178 14.423 hybrid contribution -0.684 1.180 0.086 1.366 sum -2.231 -13.159 -0.092 13.347 Atomic orbital electron populations 1.21493 0.80410 1.01794 1.00379 1.45993 1.05803 1.03630 1.79086 1.18405 0.87062 0.81629 0.76967 1.90662 1.14061 1.85604 1.54142 1.20917 0.95312 0.88743 1.52451 0.90657 1.25777 0.94633 1.00474 0.92580 1.69998 1.07584 1.27532 1.33781 0.86310 0.80366 0.81164 0.78718 1.19689 1.20275 1.18678 1.17888 0.92547 0.86770 0.91632 1.21325 1.01642 0.94887 0.97831 1.20823 0.96001 0.96735 0.96757 1.21558 1.04226 0.94173 0.99186 1.96591 1.75078 1.27997 1.99122 1.20911 0.98725 0.93471 0.97042 1.21404 0.97738 0.95163 0.98525 0.94332 0.90175 0.93498 0.91809 0.85454 0.85519 0.85472 0.85235 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 1.80 9.85 59.85 0.59 2.39 15 2 N -0.61 -13.69 2.92 -122.48 -0.36 -14.05 15 3 C 0.55 15.27 7.47 -13.09 -0.10 15.17 15 4 O -0.56 -17.83 14.52 5.15 0.07 -17.75 15 5 C -0.54 -14.51 8.62 -35.70 -0.31 -14.81 15 6 H 0.08 1.83 6.27 -52.48 -0.33 1.50 15 7 C 0.09 2.32 5.50 -17.35 -0.10 2.22 15 8 N -0.76 -22.11 11.84 55.55 0.66 -21.45 15 9 Si 0.91 19.31 29.56 -169.99 -5.03 14.28 15 10 H -0.27 -5.66 7.11 56.52 0.40 -5.26 15 11 H -0.28 -5.80 7.11 56.52 0.40 -5.40 15 12 H -0.26 -5.34 7.11 56.52 0.40 -4.94 15 13 C 0.21 4.20 4.88 -83.76 -0.41 3.80 15 14 C -0.14 -2.38 9.82 -39.36 -0.39 -2.77 15 15 C -0.08 -1.29 9.78 -39.58 -0.39 -1.67 15 16 C -0.11 -1.77 6.23 -39.45 -0.25 -2.01 15 17 Br -0.07 -0.96 33.70 -68.01 -2.29 -3.25 15 18 C -0.08 -1.36 9.78 -39.58 -0.39 -1.74 15 19 C -0.11 -2.10 9.21 -39.35 -0.36 -2.46 15 20 H 0.04 0.62 8.14 -51.93 -0.42 0.20 15 21 H 0.08 1.43 6.42 -51.93 -0.33 1.09 15 22 H 0.05 0.70 8.05 -51.93 -0.42 0.28 15 23 H 0.27 7.13 8.29 -40.82 -0.34 6.79 15 24 H 0.13 2.04 8.06 -52.49 -0.42 1.62 15 25 H 0.13 1.64 8.06 -52.48 -0.42 1.22 15 26 H 0.13 1.84 8.06 -52.48 -0.42 1.42 15 27 H 0.13 2.65 8.06 -52.49 -0.42 2.23 15 LS Contribution 264.39 15.07 3.98 3.98 Total: -1.00 -32.00 264.39 -7.37 -39.38 By element: Atomic # 1 Polarization: 3.08 SS G_CDS: -2.33 Total: 0.76 kcal Atomic # 6 Polarization: 0.20 SS G_CDS: -2.09 Total: -1.89 kcal Atomic # 7 Polarization: -35.80 SS G_CDS: 0.30 Total: -35.50 kcal Atomic # 8 Polarization: -17.83 SS G_CDS: 0.07 Total: -17.75 kcal Atomic # 14 Polarization: 19.31 SS G_CDS: -5.03 Total: 14.28 kcal Atomic # 35 Polarization: -0.96 SS G_CDS: -2.29 Total: -3.25 kcal Total LS contribution 3.98 Total: 3.98 kcal Total: -32.00 -7.37 -39.38 kcal The number of atoms in the molecule is 27 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000077435412.mol2 27 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.496 kcal (2) G-P(sol) polarization free energy of solvation -32.002 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.494 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.375 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.377 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.881 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds