Wall clock time and date at job start Tue Mar 31 2020 05:40:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34711 * 116.99910 * 2 1 4 4 O 1.21478 * 120.00434 * 0.02562 * 3 2 1 5 5 C 1.47666 * 120.00167 * 179.97438 * 3 2 1 6 6 C 1.39546 * 120.11715 * 0.02562 * 5 3 2 7 7 C 1.38712 * 119.77033 * 179.97438 * 6 5 3 8 8 N 1.39581 * 119.98965 * 180.02562 * 7 6 5 9 9 C 1.34778 * 120.00212 * 144.86898 * 8 7 6 10 10 O 1.21754 * 119.99682 * 4.59377 * 9 8 7 11 11 C 1.46158 * 120.00371 * 184.59294 * 9 8 7 12 12 H 1.07997 * 120.00028 * 0.02562 * 11 9 8 13 13 C 1.40120 * 119.99799 * 179.97438 * 11 9 8 14 14 N 1.30637 * 120.00439 * 0.02562 * 13 11 9 15 15 Si 1.86796 * 120.00047 * 180.02562 * 13 11 9 16 16 H 1.48500 * 109.47352 * 90.00000 * 15 13 11 17 17 H 1.48497 * 109.47539 * 210.00689 * 15 13 11 18 18 H 1.48501 * 109.47099 * 330.00154 * 15 13 11 19 19 C 1.39175 * 120.01637 * 0.02899 * 7 6 5 20 20 C 1.38103 * 120.24792 * 359.94808 * 19 7 6 21 21 C 1.38234 * 120.22950 * 0.05268 * 20 19 7 22 22 Cl 1.73601 * 120.01052 * 180.25116 * 21 20 19 23 23 H 1.08998 * 109.47684 * 300.00416 * 1 2 3 24 24 H 1.09008 * 109.47326 * 60.00240 * 1 2 3 25 25 H 1.09001 * 109.47420 * 179.97438 * 1 2 3 26 26 H 1.08003 * 120.11610 * 359.95905 * 6 5 3 27 27 H 0.97006 * 120.00385 * 324.87293 * 8 7 6 28 28 H 0.97001 * 120.00403 * 180.02562 * 14 13 11 29 29 H 1.08000 * 119.87996 * 180.02562 * 19 7 6 30 30 H 1.08007 * 119.88570 * 180.02562 * 20 19 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0636 1.2003 0.0000 4 8 1.4020 2.2191 0.0005 5 6 3.5382 1.2776 0.0006 6 6 4.3006 0.1089 0.0006 7 6 5.6854 0.1899 0.0006 8 7 6.4525 -0.9762 0.0000 9 6 7.6204 -1.0143 -0.6717 10 8 8.0473 -0.0080 -1.2079 11 6 8.3744 -2.2635 -0.7563 12 1 7.9956 -3.1561 -0.2810 13 6 9.5883 -2.3031 -1.4551 14 7 10.0463 -1.2234 -2.0306 15 14 10.5516 -3.8997 -1.5640 16 1 10.1205 -4.6571 -2.7664 17 1 12.0020 -3.5970 -1.6634 18 1 10.2983 -4.7146 -0.3486 19 6 6.3100 1.4337 0.0012 20 6 5.5561 2.5908 0.0007 21 6 4.1755 2.5219 0.0007 22 17 3.2334 3.9800 -0.0065 23 1 -0.3634 0.5139 0.8899 24 1 -0.3634 0.5138 -0.8901 25 1 -0.3634 -1.0276 -0.0005 26 1 3.8143 -0.8554 0.0008 27 1 6.1451 -1.7592 0.4831 28 1 10.8865 -1.2509 -2.5147 29 1 7.3883 1.4942 0.0008 30 1 6.0470 3.5529 0.0008 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000083393808.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:40:57 Heat of formation + Delta-G solvation = -95.827340 kcal Electronic energy + Delta-G solvation = -19130.979124 eV Core-core repulsion = 15724.647748 eV Total energy + Delta-G solvation = -3406.331376 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 283.044 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -40.44078 -39.21098 -37.31449 -36.25812 -35.94325 -33.54283 -32.58812 -31.33774 -29.09270 -27.72223 -26.33892 -23.98724 -22.30682 -21.38904 -19.76295 -17.83667 -17.72807 -16.91944 -16.29709 -16.15739 -15.63066 -15.32909 -14.82918 -14.18201 -13.90891 -13.61294 -13.35118 -12.98672 -12.75158 -12.53905 -12.14435 -11.93126 -11.50830 -11.38888 -11.23229 -11.18049 -11.04284 -10.77560 -10.75071 -10.42516 -9.78149 -9.37527 -8.99748 -8.86628 -7.90540 -7.35664 -6.46439 -4.94478 0.88733 1.51819 2.40718 2.73184 2.74257 3.01186 3.08801 3.11840 3.87325 3.92878 4.31025 4.38921 4.83411 4.99695 5.04720 5.11715 5.41108 5.43396 5.55149 5.60127 5.76452 6.03742 6.12400 6.36501 6.49312 6.71985 6.92166 7.18443 7.54217 7.79757 7.84249 8.00491 8.73596 9.03065 10.22184 10.43461 Molecular weight = 283.04amu Principal moments of inertia in cm(-1) A = 0.026864 B = 0.004118 C = 0.003632 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1042.048759 B = 6797.250945 C = 7707.483961 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 O -0.355 6.355 3 C 0.508 3.492 4 O -0.491 6.491 5 C -0.105 4.105 6 C -0.109 4.109 7 C 0.184 3.816 8 N -0.696 5.696 9 C 0.541 3.459 10 O -0.560 6.560 11 C -0.535 4.535 12 H 0.074 0.926 13 C 0.086 3.914 14 N -0.757 5.757 15 Si 0.914 3.086 16 H -0.270 1.270 17 H -0.277 1.277 18 H -0.263 1.263 19 C -0.081 4.081 20 C -0.104 4.104 21 C -0.021 4.021 22 Cl -0.054 7.054 23 H 0.061 0.939 24 H 0.062 0.938 25 H 0.100 0.900 26 H 0.142 0.858 27 H 0.397 0.603 28 H 0.274 0.726 29 H 0.160 0.840 30 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.042 1.331 4.851 13.050 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 O -0.272 6.272 3 C 0.352 3.648 4 O -0.379 6.379 5 C -0.108 4.108 6 C -0.131 4.131 7 C 0.084 3.916 8 N -0.340 5.340 9 C 0.348 3.652 10 O -0.442 6.442 11 C -0.571 4.571 12 H 0.092 0.908 13 C -0.135 4.135 14 N -0.384 5.384 15 Si 0.738 3.262 16 H -0.195 1.195 17 H -0.202 1.202 18 H -0.187 1.187 19 C -0.103 4.103 20 C -0.123 4.123 21 C -0.049 4.049 22 Cl -0.025 7.025 23 H 0.080 0.920 24 H 0.080 0.920 25 H 0.118 0.882 26 H 0.159 0.841 27 H 0.231 0.769 28 H 0.084 0.916 29 H 0.177 0.823 30 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -11.806 2.479 4.313 12.812 hybrid contribution -0.013 -1.043 0.069 1.045 sum -11.819 1.436 4.382 12.687 Atomic orbital electron populations 1.23227 0.76354 1.03501 1.02455 1.86561 1.23205 1.32874 1.84591 1.21100 0.88952 0.81481 0.73252 1.90895 1.66650 1.35346 1.44982 1.18447 0.88966 0.92847 1.10541 1.21170 0.92312 0.97659 1.01929 1.17950 0.89650 0.88756 0.95249 1.44213 1.23784 1.11753 1.54218 1.18446 0.78193 0.90653 0.77865 1.90624 1.67914 1.36246 1.49438 1.20838 1.05639 0.94885 1.35709 0.90779 1.25749 0.97047 0.97441 0.93299 1.69967 1.17578 1.27972 1.22921 0.86251 0.78719 0.81666 0.79529 1.19516 1.20229 1.18693 1.21826 1.02563 0.89892 0.95982 1.20923 0.90468 0.99753 1.01158 1.20783 0.91910 0.86461 1.05760 1.98364 1.72704 1.34867 1.96593 0.91978 0.91960 0.88179 0.84069 0.76861 0.91555 0.82283 0.84433 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.37 10.56 101.05 1.07 1.44 16 2 O -0.36 -4.81 9.81 -40.52 -0.40 -5.21 16 3 C 0.51 8.01 7.89 34.58 0.27 8.28 16 4 O -0.49 -8.36 13.75 -19.25 -0.26 -8.62 16 5 C -0.11 -1.74 5.87 -104.98 -0.62 -2.36 16 6 C -0.11 -1.78 9.54 -38.92 -0.37 -2.15 16 7 C 0.18 3.48 6.29 -83.81 -0.53 2.95 16 8 N -0.70 -14.17 5.31 -11.23 -0.06 -14.23 16 9 C 0.54 13.90 7.58 -13.08 -0.10 13.80 16 10 O -0.56 -16.20 12.44 5.14 0.06 -16.14 16 11 C -0.54 -13.70 9.53 -35.70 -0.34 -14.04 16 12 H 0.07 1.71 7.85 -52.49 -0.41 1.30 16 13 C 0.09 2.21 5.50 -17.35 -0.10 2.11 16 14 N -0.76 -20.91 11.82 55.55 0.66 -20.26 16 15 Si 0.91 18.56 29.56 -169.99 -5.02 13.53 16 16 H -0.27 -5.40 7.11 56.52 0.40 -5.00 16 17 H -0.28 -5.54 7.11 56.52 0.40 -5.14 16 18 H -0.26 -5.15 7.11 56.52 0.40 -4.75 16 19 C -0.08 -1.56 8.68 -39.28 -0.34 -1.90 16 20 C -0.10 -1.72 9.81 -39.63 -0.39 -2.11 16 21 C -0.02 -0.34 6.36 -39.00 -0.25 -0.59 16 22 Cl -0.05 -0.86 26.01 -51.86 -1.35 -2.21 16 23 H 0.06 0.57 8.14 -51.93 -0.42 0.15 16 24 H 0.06 0.59 8.14 -51.92 -0.42 0.17 16 25 H 0.10 0.67 8.14 -51.93 -0.42 0.24 16 26 H 0.14 2.02 7.61 -52.48 -0.40 1.62 16 27 H 0.40 6.78 8.80 -40.82 -0.36 6.42 16 28 H 0.27 6.86 8.29 -40.82 -0.34 6.52 16 29 H 0.16 3.43 6.21 -52.49 -0.33 3.10 16 30 H 0.14 1.96 8.06 -52.48 -0.42 1.54 16 LS Contribution 288.86 15.07 4.35 4.35 Total: -1.00 -31.13 288.86 -6.03 -37.16 By element: Atomic # 1 Polarization: 8.50 SS G_CDS: -2.32 Total: 6.18 kcal Atomic # 6 Polarization: 7.12 SS G_CDS: -1.69 Total: 5.43 kcal Atomic # 7 Polarization: -35.08 SS G_CDS: 0.60 Total: -34.48 kcal Atomic # 8 Polarization: -29.37 SS G_CDS: -0.60 Total: -29.97 kcal Atomic # 14 Polarization: 18.56 SS G_CDS: -5.02 Total: 13.53 kcal Atomic # 17 Polarization: -0.86 SS G_CDS: -1.35 Total: -2.21 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -31.13 -6.03 -37.16 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000083393808.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.667 kcal (2) G-P(sol) polarization free energy of solvation -31.131 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.798 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.029 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.160 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.827 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds