Wall clock time and date at job start Tue Mar 31 2020 05:41:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34706 * 116.99863 * 2 1 4 4 O 1.21470 * 120.00209 * 0.02562 * 3 2 1 5 5 C 1.47751 * 120.00031 * 179.97438 * 3 2 1 6 6 C 1.39684 * 120.10575 * 0.02562 * 5 3 2 7 7 C 1.38137 * 120.00357 * 180.02562 * 6 5 3 8 8 Cl 1.73605 * 119.89053 * 180.02562 * 7 6 5 9 9 C 1.38313 * 120.21808 * 359.97438 * 7 6 5 10 10 C 1.39076 * 120.20860 * 359.97438 * 9 7 6 11 11 N 1.39567 * 120.00375 * 180.02562 * 10 9 7 12 12 C 1.34779 * 119.99838 * 144.86255 * 11 10 9 13 13 O 1.21737 * 120.00189 * 4.59317 * 12 11 10 14 14 C 1.46177 * 119.99837 * 184.60185 * 12 11 10 15 15 H 1.08004 * 119.99783 * 5.02564 * 14 12 11 16 16 C 1.40121 * 120.00165 * 185.02721 * 14 12 11 17 17 N 1.30640 * 119.99978 * 354.96517 * 16 14 12 18 18 Si 1.86797 * 119.99943 * 174.96419 * 16 14 12 19 19 H 1.48500 * 109.47197 * 95.00288 * 18 16 14 20 20 H 1.48506 * 109.47051 * 215.00076 * 18 16 14 21 21 H 1.48498 * 109.47461 * 334.99554 * 18 16 14 22 22 C 1.38801 * 119.99582 * 0.02562 * 10 9 7 23 23 H 1.08999 * 109.47436 * 59.99499 * 1 2 3 24 24 H 1.09003 * 109.47304 * 179.97438 * 1 2 3 25 25 H 1.08996 * 109.47420 * 299.99234 * 1 2 3 26 26 H 1.08008 * 119.99868 * 0.03335 * 6 5 3 27 27 H 1.08003 * 119.89919 * 180.02562 * 9 7 6 28 28 H 0.96997 * 119.99918 * 324.85958 * 11 10 9 29 29 H 0.96993 * 120.00318 * 179.97438 * 17 16 14 30 30 H 1.07999 * 120.11030 * 179.72593 * 22 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0635 1.2003 0.0000 4 8 1.4020 2.2190 0.0005 5 6 3.5390 1.2776 0.0006 6 6 4.3020 0.1076 0.0006 7 6 5.6813 0.1824 0.0016 8 17 6.6267 -1.2737 0.0010 9 6 6.3117 1.4135 0.0022 10 6 5.5608 2.5841 0.0011 11 7 6.2014 3.8241 0.0011 12 6 5.6631 4.8606 -0.6715 13 8 4.5776 4.7396 -1.2091 14 6 6.3829 6.1301 -0.7557 15 1 7.3801 6.2134 -0.3495 16 6 5.7790 7.2390 -1.3634 17 7 4.6143 7.1133 -1.9415 18 14 6.6395 8.8969 -1.3468 19 1 7.4055 9.0697 -2.6072 20 1 5.6283 9.9782 -1.2299 21 1 7.5685 8.9609 -0.1901 22 6 4.1743 2.5192 0.0000 23 1 -0.3634 0.5139 -0.8899 24 1 -0.3634 -1.0277 -0.0005 25 1 -0.3634 0.5137 0.8900 26 1 3.8134 -0.8557 -0.0004 27 1 7.3904 1.4660 0.0026 28 1 7.0338 3.9400 0.4852 29 1 4.1961 7.8809 -2.3618 30 1 3.5894 3.4271 0.0037 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000186757517.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:41:00 Heat of formation + Delta-G solvation = -103.943821 kcal Electronic energy + Delta-G solvation = -19161.568857 eV Core-core repulsion = 15754.885524 eV Total energy + Delta-G solvation = -3406.683333 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 283.044 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -40.39347 -39.21096 -37.30682 -36.37160 -36.02879 -33.67245 -32.59095 -30.87149 -29.39917 -27.68236 -26.35644 -23.98947 -22.56127 -20.83659 -20.04490 -17.91284 -17.54288 -16.92791 -16.20967 -15.88160 -15.60738 -15.47704 -14.79112 -14.33000 -14.04262 -13.55135 -13.44401 -13.01502 -12.71871 -12.57154 -12.13274 -11.81057 -11.48000 -11.39444 -11.28269 -11.06760 -10.99501 -10.72782 -10.70948 -10.40052 -10.32015 -9.55838 -9.00659 -8.64781 -7.87257 -7.43192 -6.42991 -4.90855 0.89890 1.52885 2.18905 2.72456 2.79900 3.03425 3.11142 3.14926 3.89651 3.95040 4.33546 4.42525 4.82343 5.11104 5.19885 5.23516 5.38360 5.46047 5.50195 5.58548 5.72930 5.77798 6.27335 6.37999 6.52486 6.67215 6.92620 7.21995 7.55453 7.80739 7.92985 8.03077 8.76857 9.04867 10.25541 10.47212 Molecular weight = 283.04amu Principal moments of inertia in cm(-1) A = 0.016433 B = 0.004973 C = 0.003878 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1703.472160 B = 5629.152541 C = 7219.150808 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.358 6.358 3 C 0.511 3.489 4 O -0.492 6.492 5 C -0.099 4.099 6 C -0.101 4.101 7 C -0.025 4.025 8 Cl -0.077 7.077 9 C -0.134 4.134 10 C 0.194 3.806 11 N -0.695 5.695 12 C 0.539 3.461 13 O -0.555 6.555 14 C -0.535 4.535 15 H 0.074 0.926 16 C 0.086 3.914 17 N -0.755 5.755 18 Si 0.914 3.086 19 H -0.271 1.271 20 H -0.277 1.277 21 H -0.262 1.262 22 C -0.058 4.058 23 H 0.063 0.937 24 H 0.100 0.900 25 H 0.062 0.938 26 H 0.140 0.860 27 H 0.136 0.864 28 H 0.398 0.602 29 H 0.274 0.726 30 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.072 -12.919 4.845 13.798 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.275 6.275 3 C 0.355 3.645 4 O -0.379 6.379 5 C -0.102 4.102 6 C -0.122 4.122 7 C -0.052 4.052 8 Cl -0.048 7.048 9 C -0.157 4.157 10 C 0.094 3.906 11 N -0.338 5.338 12 C 0.346 3.654 13 O -0.437 6.437 14 C -0.571 4.571 15 H 0.093 0.907 16 C -0.136 4.136 17 N -0.382 5.382 18 Si 0.738 3.262 19 H -0.196 1.196 20 H -0.202 1.202 21 H -0.186 1.186 22 C -0.079 4.079 23 H 0.082 0.918 24 H 0.118 0.882 25 H 0.081 0.919 26 H 0.158 0.842 27 H 0.154 0.846 28 H 0.232 0.768 29 H 0.085 0.915 30 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -1.140 -12.605 4.309 13.370 hybrid contribution 0.765 0.725 0.139 1.063 sum -0.375 -11.880 4.448 12.691 Atomic orbital electron populations 1.23244 0.76343 1.03413 1.02709 1.86534 1.23274 1.32889 1.84775 1.21132 0.89012 0.81347 0.73033 1.90887 1.66466 1.35849 1.44700 1.18774 0.88722 0.94042 1.08618 1.21003 0.91430 0.98465 1.01289 1.20321 0.91291 0.86966 1.06595 1.98344 1.72726 1.36543 1.97178 1.21024 1.00505 0.89801 1.04358 1.17616 0.91059 0.86499 0.95408 1.44241 1.27338 1.08104 1.54163 1.18505 0.86171 0.82699 0.78032 1.90661 1.22097 1.81733 1.49164 1.20820 1.02617 0.93467 1.40196 0.90746 1.25759 0.94464 1.00438 0.92939 1.69981 1.13357 1.31183 1.23707 0.86240 0.79629 0.80914 0.79397 1.19614 1.20168 1.18637 1.21815 0.93996 0.97892 0.94215 0.91815 0.88186 0.91905 0.84224 0.84604 0.76766 0.91533 0.81685 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.40 10.56 101.05 1.07 1.46 16 2 O -0.36 -5.16 9.81 -40.51 -0.40 -5.55 16 3 C 0.51 9.15 7.90 34.62 0.27 9.42 16 4 O -0.49 -10.37 16.13 -19.24 -0.31 -10.68 16 5 C -0.10 -1.79 5.87 -105.01 -0.62 -2.41 16 6 C -0.10 -1.55 9.39 -39.08 -0.37 -1.91 16 7 C -0.02 -0.37 6.31 -39.59 -0.25 -0.62 16 8 Cl -0.08 -0.97 28.95 -51.86 -1.50 -2.47 16 9 C -0.13 -2.14 9.74 -39.24 -0.38 -2.52 16 10 C 0.19 3.79 6.29 -83.82 -0.53 3.27 16 11 N -0.69 -14.58 5.32 -11.23 -0.06 -14.64 16 12 C 0.54 14.34 7.57 -13.07 -0.10 14.24 16 13 O -0.55 -16.86 12.46 5.16 0.06 -16.80 16 14 C -0.54 -14.08 9.53 -35.69 -0.34 -14.42 16 15 H 0.07 1.76 7.85 -52.48 -0.41 1.35 16 16 C 0.09 2.26 5.50 -17.35 -0.10 2.17 16 17 N -0.75 -21.58 11.84 55.55 0.66 -20.92 16 18 Si 0.91 19.03 29.56 -169.99 -5.03 14.01 16 19 H -0.27 -5.53 7.11 56.52 0.40 -5.13 16 20 H -0.28 -5.69 7.11 56.52 0.40 -5.29 16 21 H -0.26 -5.25 7.11 56.52 0.40 -4.85 16 22 C -0.06 -1.22 8.23 -38.92 -0.32 -1.54 16 23 H 0.06 0.70 8.14 -51.93 -0.42 0.28 16 24 H 0.10 0.72 8.14 -51.93 -0.42 0.30 16 25 H 0.06 0.66 8.14 -51.93 -0.42 0.24 16 26 H 0.14 1.82 7.61 -52.48 -0.40 1.42 16 27 H 0.14 1.85 8.06 -52.48 -0.42 1.43 16 28 H 0.40 6.94 8.80 -40.82 -0.36 6.58 16 29 H 0.27 7.10 8.29 -40.82 -0.34 6.76 16 30 H 0.17 4.13 5.82 -52.49 -0.31 3.82 16 LS Contribution 293.13 15.07 4.42 4.42 Total: -1.00 -32.49 293.13 -6.11 -38.60 By element: Atomic # 1 Polarization: 9.20 SS G_CDS: -2.30 Total: 6.90 kcal Atomic # 6 Polarization: 8.79 SS G_CDS: -1.66 Total: 7.14 kcal Atomic # 7 Polarization: -36.15 SS G_CDS: 0.60 Total: -35.56 kcal Atomic # 8 Polarization: -32.39 SS G_CDS: -0.64 Total: -33.03 kcal Atomic # 14 Polarization: 19.03 SS G_CDS: -5.03 Total: 14.01 kcal Atomic # 17 Polarization: -0.97 SS G_CDS: -1.50 Total: -2.47 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -32.49 -6.11 -38.60 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000186757517.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.344 kcal (2) G-P(sol) polarization free energy of solvation -32.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.833 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.111 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.600 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.944 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds