Wall clock time and date at job start Tue Mar 31 2020 05:30:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.30632 * 1 3 3 Si 1.86794 * 120.00154 * 2 1 4 4 H 1.48494 * 109.47325 * 275.00229 * 3 2 1 5 5 H 1.48504 * 109.47228 * 35.00257 * 3 2 1 6 6 H 1.48505 * 109.47277 * 154.99817 * 3 2 1 7 7 C 1.40148 * 119.99956 * 179.97438 * 2 1 3 8 8 H 1.07994 * 119.99997 * 174.95333 * 7 2 1 9 9 C 1.41650 * 119.99727 * 354.95420 * 7 2 1 10 10 O 1.21792 * 120.00028 * 5.04622 * 9 7 2 11 11 N 1.34774 * 119.99443 * 185.04489 * 9 7 2 12 12 C 1.39417 * 119.99845 * 184.51322 * 11 9 7 13 13 C 1.39048 * 120.03475 * 325.23423 * 12 11 9 14 14 C 1.38450 * 120.02299 * 179.75213 * 13 12 11 15 15 C 1.39310 * 119.92538 * 0.42594 * 14 13 12 16 16 C 1.38853 * 119.95785 * 359.89773 * 15 14 13 17 17 C 1.38094 * 120.16218 * 359.86931 * 16 15 14 18 18 Cl 1.73605 * 120.00026 * 180.02562 * 17 16 15 19 19 O 1.36101 * 120.71872 * 180.13357 * 15 14 13 20 20 C 1.43160 * 116.71988 * 342.71745 * 19 15 14 21 21 C 1.53463 * 108.26655 * 46.25674 * 20 19 15 22 22 O 1.36118 * 119.33066 * 180.10375 * 14 13 12 23 23 H 0.96996 * 119.99922 * 359.97438 * 1 2 3 24 24 H 0.96995 * 120.00523 * 4.23577 * 11 9 7 25 25 H 1.07998 * 119.99088 * 359.97438 * 13 12 11 26 26 H 1.08002 * 119.91955 * 179.89072 * 16 15 14 27 27 H 1.08995 * 109.71079 * 286.55285 * 20 19 15 28 28 H 1.09002 * 109.69785 * 165.94123 * 20 19 15 29 29 H 1.08997 * 109.71270 * 180.47846 * 21 20 19 30 30 H 1.08998 * 109.71116 * 59.84942 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3063 0.0000 0.0000 3 14 2.2403 1.6177 0.0000 4 1 2.3821 2.1074 -1.3947 5 1 1.4947 2.6198 0.8031 6 1 3.5868 1.4119 0.5918 7 6 2.0071 -1.2137 0.0005 8 1 3.0839 -1.2156 -0.0817 9 6 1.3028 -2.4380 0.1090 10 8 0.0849 -2.4420 0.1092 11 7 1.9807 -3.5983 0.2119 12 6 1.2909 -4.8098 0.2239 13 6 0.0431 -4.8943 0.8315 14 6 -0.6440 -6.0963 0.8387 15 6 -0.0797 -7.2229 0.2444 16 6 1.1694 -7.1380 -0.3559 17 6 1.8534 -5.9384 -0.3679 18 17 3.4147 -5.8368 -1.1203 19 8 -0.7420 -8.4118 0.2398 20 6 -1.8201 -8.5518 1.1713 21 6 -2.6857 -7.2866 1.0988 22 8 -1.8655 -6.1625 1.4357 23 1 -0.4850 0.8400 0.0004 24 1 2.9486 -3.5908 0.2737 25 1 -0.3920 -4.0211 1.2948 26 1 1.6070 -8.0122 -0.8150 27 1 -1.4221 -8.6677 2.1794 28 1 -2.4205 -9.4233 0.9102 29 1 -3.5109 -7.3647 1.8067 30 1 -3.0772 -7.1665 0.0887 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000274224931.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:30:15 Heat of formation + Delta-G solvation = -87.629856 kcal Electronic energy + Delta-G solvation = -19688.817074 eV Core-core repulsion = 16282.841168 eV Total energy + Delta-G solvation = -3405.975906 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 283.044 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -40.94514 -38.76425 -37.01571 -36.73671 -35.74759 -33.40682 -32.43129 -30.54970 -29.78097 -27.88545 -26.31902 -24.30808 -22.80870 -21.03859 -19.89894 -18.32140 -17.98367 -17.25989 -16.64281 -15.67106 -15.38157 -15.27128 -14.77568 -14.26136 -14.20777 -13.93980 -13.74854 -13.24243 -12.92004 -12.52037 -12.33319 -12.05069 -11.88945 -11.37958 -11.15800 -10.96690 -10.68142 -10.63077 -10.43127 -10.34456 -10.22938 -9.14515 -8.80085 -8.05150 -7.70208 -7.00995 -6.41097 -4.93249 1.53338 1.72411 2.46423 3.04230 3.12379 3.16233 3.23846 3.47833 3.95074 3.99580 4.33846 4.39004 4.59777 4.85679 4.90208 4.95219 5.25762 5.43694 5.48463 5.66658 5.78911 5.98069 6.22928 6.43012 6.58955 6.89743 7.13976 7.22005 7.67133 7.77974 7.97006 8.08132 8.77556 9.21075 10.33897 10.53286 Molecular weight = 283.04amu Principal moments of inertia in cm(-1) A = 0.021266 B = 0.005322 C = 0.004320 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1316.357366 B = 5260.131527 C = 6479.384778 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.745 5.745 2 C 0.088 3.912 3 Si 0.913 3.087 4 H -0.270 1.270 5 H -0.276 1.276 6 H -0.262 1.262 7 C -0.535 4.535 8 H 0.072 0.928 9 C 0.543 3.457 10 O -0.564 6.564 11 N -0.691 5.691 12 C 0.215 3.785 13 C -0.118 4.118 14 C 0.078 3.922 15 C 0.010 3.990 16 C -0.084 4.084 17 C -0.090 4.090 18 Cl -0.071 7.071 19 O -0.310 6.310 20 C 0.023 3.977 21 C 0.020 3.980 22 O -0.302 6.302 23 H 0.273 0.727 24 H 0.397 0.603 25 H 0.166 0.834 26 H 0.138 0.862 27 H 0.073 0.927 28 H 0.116 0.884 29 H 0.118 0.882 30 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.218 -13.093 1.896 13.231 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.373 5.373 2 C -0.135 4.135 3 Si 0.737 3.263 4 H -0.196 1.196 5 H -0.202 1.202 6 H -0.186 1.186 7 C -0.570 4.570 8 H 0.090 0.910 9 C 0.352 3.648 10 O -0.448 6.448 11 N -0.334 5.334 12 C 0.113 3.887 13 C -0.140 4.140 14 C 0.032 3.968 15 C -0.036 4.036 16 C -0.104 4.104 17 C -0.121 4.121 18 Cl -0.042 7.042 19 O -0.225 6.225 20 C -0.053 4.053 21 C -0.056 4.056 22 O -0.217 6.217 23 H 0.084 0.916 24 H 0.232 0.768 25 H 0.183 0.817 26 H 0.156 0.844 27 H 0.091 0.909 28 H 0.134 0.866 29 H 0.135 0.865 30 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -1.150 -12.862 1.831 13.042 hybrid contribution 0.858 0.613 -0.094 1.059 sum -0.292 -12.249 1.737 12.375 Atomic orbital electron populations 1.70011 1.07322 1.27984 1.31944 1.25765 0.94641 1.00721 0.92368 0.86255 0.80342 0.80751 0.78937 1.19559 1.20160 1.18552 1.20007 0.94801 0.89935 1.52209 0.90984 1.17075 0.87593 0.81914 0.78174 1.90652 1.13482 1.85297 1.55336 1.44216 1.09907 1.03755 1.75569 1.17311 0.92315 0.86053 0.92984 1.20692 0.95080 0.96081 1.02166 1.18827 0.86253 0.93134 0.98597 1.18468 0.93936 0.84456 1.06739 1.19746 0.91501 0.96963 1.02169 1.20311 0.90543 0.95120 1.06076 1.98316 1.26395 1.98451 1.81034 1.86222 1.46266 1.32202 1.57805 1.23533 0.88709 0.99142 0.93887 1.23584 0.93394 0.85449 1.03164 1.86352 1.25347 1.45186 1.64771 0.91574 0.76839 0.81686 0.84433 0.90862 0.86575 0.86451 0.90639 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.75 -21.24 11.75 55.56 0.65 -20.59 16 2 C 0.09 2.34 5.49 -17.35 -0.10 2.25 16 3 Si 0.91 19.17 29.56 -169.99 -5.03 14.14 16 4 H -0.27 -5.58 7.11 56.52 0.40 -5.18 16 5 H -0.28 -5.68 7.11 56.52 0.40 -5.28 16 6 H -0.26 -5.31 7.11 56.52 0.40 -4.91 16 7 C -0.53 -14.42 9.30 -37.56 -0.35 -14.77 16 8 H 0.07 1.77 7.85 -52.49 -0.41 1.36 16 9 C 0.54 14.91 7.40 -14.96 -0.11 14.80 16 10 O -0.56 -17.34 12.29 5.11 0.06 -17.27 16 11 N -0.69 -15.71 5.03 -12.42 -0.06 -15.77 16 12 C 0.22 4.60 6.30 -83.72 -0.53 4.07 16 13 C -0.12 -2.60 8.60 -39.20 -0.34 -2.94 16 14 C 0.08 1.49 6.49 -39.10 -0.25 1.24 16 15 C 0.01 0.17 6.51 -38.96 -0.25 -0.09 16 16 C -0.08 -1.41 9.74 -39.41 -0.38 -1.79 16 17 C -0.09 -1.65 6.34 -39.24 -0.25 -1.90 16 18 Cl -0.07 -1.14 27.94 -51.86 -1.45 -2.59 16 19 O -0.31 -4.61 10.42 -32.76 -0.34 -4.96 16 20 C 0.02 0.25 7.26 37.40 0.27 0.52 16 21 C 0.02 0.24 7.26 37.40 0.27 0.51 16 22 O -0.30 -5.28 10.42 -32.82 -0.34 -5.62 16 23 H 0.27 7.02 8.29 -40.82 -0.34 6.68 16 24 H 0.40 8.00 8.00 -40.82 -0.33 7.67 16 25 H 0.17 4.15 6.19 -52.49 -0.32 3.82 16 26 H 0.14 1.98 8.06 -52.49 -0.42 1.55 16 27 H 0.07 0.75 8.14 -51.93 -0.42 0.32 16 28 H 0.12 0.83 8.14 -51.93 -0.42 0.40 16 29 H 0.12 0.98 8.14 -51.93 -0.42 0.56 16 30 H 0.08 0.89 8.14 -51.93 -0.42 0.46 16 LS Contribution 280.37 15.07 4.23 4.23 Total: -1.00 -32.47 280.37 -6.61 -39.07 By element: Atomic # 1 Polarization: 9.78 SS G_CDS: -2.31 Total: 7.47 kcal Atomic # 6 Polarization: 3.92 SS G_CDS: -2.02 Total: 1.90 kcal Atomic # 7 Polarization: -36.95 SS G_CDS: 0.59 Total: -36.36 kcal Atomic # 8 Polarization: -27.23 SS G_CDS: -0.62 Total: -27.85 kcal Atomic # 14 Polarization: 19.17 SS G_CDS: -5.03 Total: 14.14 kcal Atomic # 17 Polarization: -1.14 SS G_CDS: -1.45 Total: -2.59 kcal Total LS contribution 4.23 Total: 4.23 kcal Total: -32.47 -6.61 -39.07 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000274224931.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.555 kcal (2) G-P(sol) polarization free energy of solvation -32.467 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.022 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.608 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.074 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.630 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds