Wall clock time and date at job start Tue Mar 31 2020 05:28:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17407 * 1 3 3 C 1.47195 * 179.97438 * 2 1 4 4 N 1.46492 * 109.47289 * 37.21049 * 3 2 1 5 5 C 1.36944 * 120.00371 * 268.45522 * 4 3 2 6 6 H 1.07998 * 120.00134 * 191.30805 * 5 4 3 7 7 C 1.38816 * 119.99732 * 11.30877 * 5 4 3 8 8 N 1.31625 * 119.99622 * 24.05174 * 7 5 4 9 9 Si 1.86791 * 120.00160 * 204.05686 * 7 5 4 10 10 H 1.48495 * 109.47385 * 59.99476 * 9 7 5 11 11 H 1.48494 * 109.47285 * 179.97438 * 9 7 5 12 12 H 1.48504 * 109.47025 * 300.00036 * 9 7 5 13 13 C 1.46500 * 120.00114 * 88.46022 * 4 3 2 14 14 C 1.50700 * 109.46683 * 270.00011 * 13 4 3 15 15 C 1.38336 * 120.01713 * 90.00146 * 14 13 4 16 16 Cl 1.73603 * 120.00293 * 359.69712 * 15 14 13 17 17 C 1.38360 * 119.98976 * 179.97438 * 15 14 13 18 18 C 1.38221 * 120.01305 * 359.97438 * 17 15 14 19 19 C 1.38225 * 120.02653 * 359.97438 * 18 17 15 20 20 C 1.38336 * 120.01263 * 269.97368 * 14 13 4 21 21 Cl 1.73596 * 120.00578 * 0.02562 * 20 14 13 22 22 H 4.40636 * 5.51343 * 180.02562 * 4 1 2 23 23 H 1.09007 * 109.47231 * 277.20983 * 3 2 1 24 24 H 1.09000 * 109.46878 * 157.21299 * 3 2 1 25 25 H 0.97000 * 119.99663 * 180.02562 * 8 7 5 26 26 H 1.09003 * 109.47602 * 149.99876 * 13 4 3 27 27 H 1.09000 * 109.47321 * 29.99644 * 13 4 3 28 28 H 1.08000 * 119.99278 * 179.97438 * 17 15 14 29 29 H 1.07995 * 119.98863 * 180.02562 * 18 17 15 30 30 H 1.07994 * 119.99526 * 179.97438 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1349 -1.0991 -0.8352 5 6 3.3938 -2.3216 -0.2751 6 1 3.9220 -3.0742 -0.8416 7 6 2.9774 -2.5934 1.0210 8 7 1.9683 -1.9274 1.5412 9 14 3.8492 -3.9040 2.0266 10 1 5.2809 -3.5406 2.1786 11 1 3.2184 -4.0003 3.3674 12 1 3.7417 -5.2129 1.3333 13 6 3.3468 -0.8911 -2.2698 14 6 2.0806 -1.2206 -3.0175 15 6 1.1376 -0.2353 -3.2496 16 17 1.4091 1.3793 -2.6725 17 6 -0.0245 -0.5383 -3.9366 18 6 -0.2432 -1.8251 -4.3916 19 6 0.6991 -2.8097 -4.1610 20 6 1.8609 -2.5083 -3.4727 21 17 3.0436 -3.7454 -3.1821 22 1 -1.0498 -0.0001 -0.0003 23 1 3.0095 -0.1282 1.0196 24 1 3.0089 0.9483 -0.3980 25 1 1.6775 -2.1171 2.4469 26 1 4.1522 -1.5390 -2.6159 27 1 3.6149 0.1499 -2.4503 28 1 -0.7609 0.2307 -4.1174 29 1 -1.1502 -2.0610 -4.9281 30 1 0.5275 -3.8150 -4.5163 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000281240454.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:28:48 Heat of formation + Delta-G solvation = 101.331756 kcal Electronic energy + Delta-G solvation = -18072.179909 eV Core-core repulsion = 15115.107157 eV Total energy + Delta-G solvation = -2957.072751 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 283.023 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -39.08320 -36.15880 -36.03218 -35.62359 -32.22486 -31.41501 -30.13196 -29.94776 -26.23657 -25.64303 -22.33797 -22.30128 -20.50469 -17.47592 -16.83688 -16.34837 -15.42210 -15.27602 -14.87181 -13.94015 -13.83349 -13.46245 -13.29592 -12.88007 -12.48208 -11.98345 -11.75445 -11.63294 -11.30056 -11.18545 -10.87645 -10.68564 -10.53490 -10.44389 -10.29931 -10.01670 -9.79586 -8.84184 -8.73384 -8.30991 -8.22417 -8.16375 -7.08618 -5.78435 -3.12312 1.47673 1.57561 2.45536 2.87763 3.38822 3.45252 3.46154 3.89809 4.32181 4.52613 4.63088 5.09405 5.23867 5.31832 5.39393 5.63409 5.74155 5.83461 5.95632 6.10139 6.11479 6.48457 6.56233 6.58208 6.75886 6.79121 7.01546 7.30227 7.52318 7.81032 8.23412 9.10734 9.36025 9.75025 10.18912 11.23537 Molecular weight = 283.02amu Principal moments of inertia in cm(-1) A = 0.016533 B = 0.009304 C = 0.007043 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1693.186423 B = 3008.711790 C = 3974.354732 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.304 4.304 2 C -0.081 4.081 3 C 0.267 3.733 4 N -0.566 5.566 5 C -0.254 4.254 6 H 0.086 0.914 7 C 0.003 3.997 8 N -0.883 5.883 9 Si 0.897 3.103 10 H -0.283 1.283 11 H -0.292 1.292 12 H -0.284 1.284 13 C 0.170 3.830 14 C -0.071 4.071 15 C -0.011 4.011 16 Cl -0.064 7.064 17 C -0.113 4.113 18 C -0.119 4.119 19 C -0.114 4.114 20 C -0.009 4.009 21 Cl -0.058 7.058 22 H 0.183 0.817 23 H 0.096 0.904 24 H 0.038 0.962 25 H 0.255 0.745 26 H 0.069 0.931 27 H 0.060 0.940 28 H 0.127 0.873 29 H 0.129 0.871 30 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.578 2.870 -10.768 11.255 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.324 4.324 2 C -0.084 4.084 3 C 0.142 3.858 4 N -0.283 5.283 5 C -0.383 4.383 6 H 0.104 0.896 7 C -0.196 4.196 8 N -0.526 5.526 9 Si 0.726 3.274 10 H -0.210 1.210 11 H -0.218 1.218 12 H -0.210 1.210 13 C 0.042 3.958 14 C -0.077 4.077 15 C -0.039 4.039 16 Cl -0.035 7.035 17 C -0.132 4.132 18 C -0.138 4.138 19 C -0.133 4.133 20 C -0.038 4.038 21 Cl -0.029 7.029 22 H 0.200 0.800 23 H 0.114 0.886 24 H 0.055 0.945 25 H 0.065 0.935 26 H 0.088 0.912 27 H 0.079 0.921 28 H 0.145 0.855 29 H 0.147 0.853 30 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -1.424 2.879 -10.437 10.920 hybrid contribution -0.316 -0.982 0.801 1.306 sum -1.740 1.897 -9.637 9.974 Atomic orbital electron populations 1.23947 0.95105 1.06714 1.06590 1.23932 0.94911 0.94596 0.94916 1.17986 0.83221 0.87751 0.96811 1.44582 1.73691 1.09997 1.00009 1.19420 1.29777 0.92695 0.96368 0.89643 1.24863 0.96910 0.98838 0.99038 1.70165 1.23313 1.43485 1.15637 0.86437 0.79737 0.81527 0.79659 1.20979 1.21780 1.21011 1.20227 0.91250 0.99920 0.84353 1.20858 1.01403 0.90819 0.94627 1.20492 0.96162 0.86586 1.00619 1.98337 1.96263 1.21191 1.87740 1.20960 0.95992 0.97303 0.98922 1.20780 0.99174 0.92224 1.01618 1.21008 0.92847 0.99935 0.99551 1.20511 0.92431 0.89798 1.01024 1.98349 1.57145 1.52527 1.94863 0.79970 0.88604 0.94451 0.93487 0.91245 0.92127 0.85505 0.85314 0.85446 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.30 -7.03 19.03 29.55 0.56 -6.47 16 2 C -0.08 -1.93 8.81 -37.12 -0.33 -2.26 16 3 C 0.27 6.24 4.94 -6.84 -0.03 6.21 16 4 N -0.57 -13.34 2.47 -177.95 -0.44 -13.78 16 5 C -0.25 -6.53 9.16 -15.05 -0.14 -6.67 16 6 H 0.09 2.16 6.47 -52.49 -0.34 1.82 16 7 C 0.00 0.07 4.88 -17.43 -0.09 -0.01 16 8 N -0.88 -24.66 9.23 55.49 0.51 -24.15 16 9 Si 0.90 21.42 29.62 -169.99 -5.03 16.39 16 10 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 11 H -0.29 -7.11 7.11 56.52 0.40 -6.70 16 12 H -0.28 -6.81 7.11 56.52 0.40 -6.41 16 13 C 0.17 3.41 5.05 -5.19 -0.03 3.39 16 14 C -0.07 -1.38 5.36 -104.55 -0.56 -1.94 16 15 C -0.01 -0.19 5.78 -39.50 -0.23 -0.42 16 16 Cl -0.06 -1.10 24.00 -51.86 -1.24 -2.34 16 17 C -0.11 -1.76 9.83 -39.54 -0.39 -2.15 16 18 C -0.12 -1.71 10.04 -39.59 -0.40 -2.11 16 19 C -0.11 -1.82 9.83 -39.54 -0.39 -2.21 16 20 C -0.01 -0.18 6.31 -39.50 -0.25 -0.43 16 21 Cl -0.06 -1.06 25.35 -51.86 -1.31 -2.38 16 22 H 0.18 3.72 7.80 -54.10 -0.42 3.29 16 23 H 0.10 2.46 6.36 -51.93 -0.33 2.13 16 24 H 0.04 0.79 7.47 -51.93 -0.39 0.40 16 25 H 0.25 7.08 8.31 -40.82 -0.34 6.74 16 26 H 0.07 1.36 6.79 -51.93 -0.35 1.01 16 27 H 0.06 1.13 6.68 -51.93 -0.35 0.78 16 28 H 0.13 1.68 8.06 -52.49 -0.42 1.26 16 29 H 0.13 1.42 8.06 -52.49 -0.42 1.00 16 30 H 0.13 1.73 8.06 -52.49 -0.42 1.30 16 LS Contribution 285.08 15.07 4.30 4.30 Total: -1.00 -28.61 285.08 -8.07 -36.68 By element: Atomic # 1 Polarization: 2.92 SS G_CDS: -2.58 Total: 0.34 kcal Atomic # 6 Polarization: -12.79 SS G_CDS: -2.26 Total: -15.05 kcal Atomic # 7 Polarization: -38.00 SS G_CDS: 0.07 Total: -37.93 kcal Atomic # 14 Polarization: 21.42 SS G_CDS: -5.03 Total: 16.39 kcal Atomic # 17 Polarization: -2.16 SS G_CDS: -2.56 Total: -4.72 kcal Total LS contribution 4.30 Total: 4.30 kcal Total: -28.61 -8.07 -36.68 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000281240454.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 138.012 kcal (2) G-P(sol) polarization free energy of solvation -28.612 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 109.400 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.068 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.680 kcal (6) G-S(sol) free energy of system = (1) + (5) 101.332 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds