Wall clock time and date at job start Tue Mar 31 2020 05:28:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17408 * 1 3 3 C 1.47192 * 179.97438 * 2 1 4 4 N 1.46499 * 109.47535 * 56.25068 * 3 2 1 5 5 C 1.36936 * 120.00019 * 276.01331 * 4 3 2 6 6 H 1.07997 * 120.00540 * 181.18642 * 5 4 3 7 7 C 1.38819 * 119.99912 * 1.18643 * 5 4 3 8 8 N 1.31619 * 120.00151 * 27.95979 * 7 5 4 9 9 Si 1.86798 * 120.00048 * 207.96131 * 7 5 4 10 10 H 1.48501 * 109.47305 * 84.98554 * 9 7 5 11 11 H 1.48495 * 109.47023 * 204.98817 * 9 7 5 12 12 H 1.48502 * 109.46855 * 324.99104 * 9 7 5 13 13 C 1.46502 * 119.99981 * 96.00906 * 4 3 2 14 14 C 1.50700 * 109.46769 * 270.00434 * 13 4 3 15 15 C 1.38225 * 119.99780 * 259.72683 * 14 13 4 16 16 C 1.38332 * 119.99932 * 179.73081 * 15 14 13 17 17 Cl 1.73597 * 120.00034 * 180.29813 * 16 15 14 18 18 C 1.38375 * 119.99717 * 0.56593 * 16 15 14 19 19 C 1.38172 * 120.00460 * 359.70642 * 18 16 15 20 20 C 1.38330 * 120.00516 * 80.00230 * 14 13 4 21 21 Cl 1.73601 * 119.99452 * 359.97438 * 20 14 13 22 22 H 4.40639 * 5.51394 * 180.02562 * 4 1 2 23 23 H 1.09006 * 109.47014 * 296.25041 * 3 2 1 24 24 H 1.09002 * 109.47015 * 176.25546 * 3 2 1 25 25 H 0.96998 * 120.00232 * 179.97438 * 8 7 5 26 26 H 1.08998 * 109.46940 * 29.99987 * 13 4 3 27 27 H 1.08994 * 109.46762 * 150.00585 * 13 4 3 28 28 H 1.08000 * 120.00031 * 0.02562 * 15 14 13 29 29 H 1.08007 * 120.00016 * 179.69038 * 18 16 15 30 30 H 1.07996 * 120.00411 * 179.97438 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1348 -0.7664 -1.1484 5 6 3.2465 -2.1287 -1.0644 6 1 3.6249 -2.6923 -1.9043 7 6 2.8734 -2.7851 0.1005 8 7 1.9482 -2.2672 0.8803 9 14 3.6844 -4.4035 0.5613 10 1 4.9510 -4.1333 1.2879 11 1 2.7706 -5.1846 1.4330 12 1 3.9766 -5.1792 -0.6709 13 6 3.5039 -0.0762 -2.3868 14 6 2.2983 0.0219 -3.2857 15 6 2.1452 -0.8640 -4.3356 16 6 1.0358 -0.7775 -5.1573 17 17 0.8396 -1.8950 -6.4713 18 6 0.0852 0.2032 -4.9353 19 6 0.2410 1.0923 -3.8892 20 6 1.3477 1.0019 -3.0635 21 17 1.5433 2.1186 -1.7487 22 1 -1.0498 0.0000 -0.0003 23 1 3.0095 -0.4537 0.9217 24 1 3.0089 1.0263 -0.0671 25 1 1.6873 -2.7261 1.6941 26 1 3.8638 0.9253 -2.1511 27 1 4.2905 -0.6352 -2.8936 28 1 2.8894 -1.6267 -4.5116 29 1 -0.7786 0.2739 -5.5799 30 1 -0.5007 1.8579 -3.7162 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000281380011.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:28:51 Heat of formation + Delta-G solvation = 102.573560 kcal Electronic energy + Delta-G solvation = -17769.706150 eV Core-core repulsion = 14812.687247 eV Total energy + Delta-G solvation = -2957.018903 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 283.023 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -39.16993 -36.59920 -35.91373 -35.76808 -32.34749 -31.40324 -30.32227 -29.87544 -26.27050 -25.77375 -22.49140 -22.29835 -20.56831 -17.56791 -16.82148 -16.29747 -15.50808 -15.45626 -15.03947 -13.96979 -13.82366 -13.51552 -13.28773 -13.08781 -12.47401 -12.17290 -11.95869 -11.75566 -11.41919 -11.35295 -10.90420 -10.72525 -10.70076 -10.50568 -10.34865 -10.05049 -9.90365 -8.82396 -8.74812 -8.61618 -8.18779 -8.08807 -7.21186 -5.85517 -3.16008 1.34641 1.54558 2.29163 2.66022 3.35928 3.43577 3.44574 3.82057 4.30389 4.51761 4.64795 4.99981 5.06697 5.26565 5.46152 5.58037 5.70064 5.76138 5.96648 6.04810 6.17689 6.32578 6.41439 6.49891 6.69815 6.78739 6.96799 7.33673 7.51096 7.71638 8.14655 9.03616 9.38818 9.69621 10.11847 11.15321 Molecular weight = 283.02amu Principal moments of inertia in cm(-1) A = 0.014971 B = 0.007853 C = 0.005876 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1869.783109 B = 3564.652278 C = 4763.786191 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.310 4.310 2 C -0.073 4.073 3 C 0.265 3.735 4 N -0.574 5.574 5 C -0.266 4.266 6 H 0.081 0.919 7 C 0.007 3.993 8 N -0.877 5.877 9 Si 0.897 3.103 10 H -0.286 1.286 11 H -0.293 1.293 12 H -0.280 1.280 13 C 0.177 3.823 14 C -0.067 4.067 15 C -0.089 4.089 16 C -0.032 4.032 17 Cl -0.082 7.082 18 C -0.120 4.120 19 C -0.103 4.103 20 C -0.014 4.014 21 Cl -0.059 7.059 22 H 0.183 0.817 23 H 0.094 0.906 24 H 0.041 0.959 25 H 0.256 0.744 26 H 0.062 0.938 27 H 0.067 0.933 28 H 0.135 0.865 29 H 0.131 0.869 30 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.797 7.208 -9.240 11.746 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.330 4.330 2 C -0.076 4.076 3 C 0.140 3.860 4 N -0.291 5.291 5 C -0.394 4.394 6 H 0.099 0.901 7 C -0.192 4.192 8 N -0.519 5.519 9 Si 0.727 3.273 10 H -0.213 1.213 11 H -0.220 1.220 12 H -0.206 1.206 13 C 0.050 3.950 14 C -0.072 4.072 15 C -0.109 4.109 16 C -0.058 4.058 17 Cl -0.053 7.053 18 C -0.139 4.139 19 C -0.122 4.122 20 C -0.042 4.042 21 Cl -0.030 7.030 22 H 0.200 0.800 23 H 0.111 0.889 24 H 0.059 0.941 25 H 0.066 0.934 26 H 0.080 0.920 27 H 0.085 0.915 28 H 0.153 0.847 29 H 0.149 0.851 30 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -0.787 7.104 -9.017 11.506 hybrid contribution -0.448 -1.209 0.256 1.314 sum -1.235 5.895 -8.761 10.631 Atomic orbital electron populations 1.23932 0.95104 1.08502 1.05442 1.23816 0.94828 0.93263 0.95726 1.18198 0.83340 0.92340 0.92093 1.44599 1.73414 1.03984 1.07104 1.19252 1.38102 0.82370 0.99717 0.90144 1.24804 0.97513 0.98328 0.98569 1.70228 1.26493 1.39996 1.15231 0.86376 0.79421 0.83202 0.78344 1.21281 1.21997 1.20594 1.20088 0.91327 0.97446 0.86153 1.21124 1.00302 0.91821 0.93967 1.20847 0.96981 0.99275 0.93840 1.20931 0.97686 0.94396 0.92811 1.98340 1.97372 1.61930 1.47682 1.20742 0.99022 0.95193 0.98976 1.20853 0.96808 0.99887 0.94688 1.20770 0.96904 0.94712 0.91823 1.98352 1.97067 1.60790 1.46774 0.80001 0.88880 0.94142 0.93370 0.91983 0.91498 0.84719 0.85085 0.84995 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 21. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.31 -7.18 18.79 29.55 0.56 -6.63 16 2 C -0.07 -1.75 8.23 -37.13 -0.31 -2.05 16 3 C 0.26 6.12 4.82 -6.83 -0.03 6.09 16 4 N -0.57 -13.27 2.49 -177.95 -0.44 -13.71 16 5 C -0.27 -6.83 9.66 -15.06 -0.15 -6.98 16 6 H 0.08 2.03 7.97 -52.49 -0.42 1.61 16 7 C 0.01 0.20 4.94 -17.43 -0.09 0.11 16 8 N -0.88 -24.26 8.95 55.49 0.50 -23.76 16 9 Si 0.90 21.06 29.64 -169.99 -5.04 16.02 16 10 H -0.29 -6.68 7.11 56.52 0.40 -6.28 16 11 H -0.29 -7.09 7.11 56.52 0.40 -6.69 16 12 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 13 C 0.18 3.37 5.40 -5.19 -0.03 3.34 16 14 C -0.07 -1.23 5.47 -104.59 -0.57 -1.80 16 15 C -0.09 -1.55 9.45 -39.55 -0.37 -1.92 16 16 C -0.03 -0.50 6.32 -39.50 -0.25 -0.75 16 17 Cl -0.08 -1.16 28.96 -51.86 -1.50 -2.67 16 18 C -0.12 -1.77 9.83 -39.56 -0.39 -2.15 16 19 C -0.10 -1.60 9.83 -39.56 -0.39 -1.99 16 20 C -0.01 -0.25 5.90 -39.50 -0.23 -0.48 16 21 Cl -0.06 -1.01 21.92 -51.86 -1.14 -2.15 16 22 H 0.18 3.72 7.80 -54.10 -0.42 3.30 16 23 H 0.09 2.38 6.32 -51.93 -0.33 2.05 16 24 H 0.04 0.83 6.47 -51.93 -0.34 0.50 16 25 H 0.26 7.00 8.31 -40.82 -0.34 6.66 16 26 H 0.06 1.08 7.07 -51.93 -0.37 0.71 16 27 H 0.07 1.19 7.90 -51.93 -0.41 0.78 16 28 H 0.13 2.22 8.03 -52.49 -0.42 1.80 16 29 H 0.13 1.59 8.06 -52.48 -0.42 1.17 16 30 H 0.13 1.74 8.06 -52.49 -0.42 1.31 16 LS Contribution 287.90 15.07 4.34 4.34 Total: -1.00 -28.13 287.90 -8.22 -36.34 By element: Atomic # 1 Polarization: 3.48 SS G_CDS: -2.68 Total: 0.80 kcal Atomic # 6 Polarization: -12.97 SS G_CDS: -2.25 Total: -15.22 kcal Atomic # 7 Polarization: -37.53 SS G_CDS: 0.05 Total: -37.48 kcal Atomic # 14 Polarization: 21.06 SS G_CDS: -5.04 Total: 16.02 kcal Atomic # 17 Polarization: -2.17 SS G_CDS: -2.64 Total: -4.81 kcal Total LS contribution 4.34 Total: 4.34 kcal Total: -28.13 -8.22 -36.34 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000281380011.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 138.918 kcal (2) G-P(sol) polarization free energy of solvation -28.129 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 110.790 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.216 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.345 kcal (6) G-S(sol) free energy of system = (1) + (5) 102.574 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds