Wall clock time and date at job start Tue Mar 31 2020 05:28:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17397 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 N 1.46501 * 109.47235 * 189.03896 * 3 2 1 5 5 C 1.36937 * 120.00090 * 274.43522 * 4 3 2 6 6 H 1.07992 * 120.00189 * 183.19298 * 5 4 3 7 7 C 1.38811 * 119.99797 * 2.92082 * 5 4 3 8 8 N 1.31626 * 119.99877 * 24.58854 * 7 5 4 9 9 Si 1.86798 * 120.00149 * 204.59156 * 7 5 4 10 10 H 1.48498 * 109.47295 * 89.99588 * 9 7 5 11 11 H 1.48501 * 109.47271 * 209.99810 * 9 7 5 12 12 H 1.48507 * 109.46746 * 329.99585 * 9 7 5 13 13 C 1.46500 * 119.99825 * 94.43186 * 4 3 2 14 14 C 1.50698 * 109.47540 * 271.66649 * 13 4 3 15 15 C 1.38251 * 120.00339 * 264.98000 * 14 13 4 16 16 C 1.38223 * 120.03896 * 179.77061 * 15 14 13 17 17 C 1.38250 * 120.03783 * 0.49661 * 16 15 14 18 18 C 1.38305 * 120.00044 * 359.75098 * 17 16 15 19 19 Cl 1.73594 * 120.01996 * 179.97438 * 18 17 16 20 20 C 1.38302 * 119.99992 * 85.24383 * 14 13 4 21 21 Cl 1.73601 * 120.01899 * 0.02562 * 20 14 13 22 22 H 4.40644 * 5.51431 * 179.97438 * 4 1 2 23 23 H 1.08997 * 109.47435 * 69.03858 * 3 2 1 24 24 H 1.09003 * 109.46990 * 309.03629 * 3 2 1 25 25 H 0.97000 * 119.99509 * 180.02562 * 8 7 5 26 26 H 1.08995 * 109.47589 * 31.67022 * 13 4 3 27 27 H 1.09007 * 109.47029 * 151.66891 * 13 4 3 28 28 H 1.07997 * 119.97840 * 0.02562 * 15 14 13 29 29 H 1.07995 * 119.97769 * 180.27484 * 16 15 14 30 30 H 1.07998 * 119.99713 * 179.77685 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1337 1.3649 0.2170 5 6 3.2751 2.2185 -0.8444 6 1 3.6832 3.2067 -0.6921 7 6 2.8992 1.8114 -2.1172 8 7 1.9979 0.8638 -2.2657 9 14 3.6725 2.6085 -3.6192 10 1 4.8912 1.8541 -4.0077 11 1 2.7017 2.5932 -4.7428 12 1 4.0395 4.0119 -3.3011 13 6 3.4701 1.8161 1.5696 14 6 2.2400 2.3820 2.2310 15 6 1.9990 3.7429 2.1936 16 6 0.8685 4.2622 2.7959 17 6 -0.0174 3.4226 3.4452 18 6 0.2247 2.0615 3.4880 19 17 -0.8870 1.0069 4.3037 20 6 1.3547 1.5407 2.8800 21 17 1.6606 -0.1673 2.9338 22 1 -1.0502 -0.0004 -0.0003 23 1 3.0095 -0.3668 -0.9596 24 1 3.0096 -0.6464 0.7983 25 1 1.7355 0.5791 -3.1551 26 1 3.8405 0.9727 2.1524 27 1 4.2399 2.5859 1.5149 28 1 2.6925 4.4000 1.6900 29 1 0.6790 5.3248 2.7623 30 1 -0.8986 3.8295 3.9187 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000281444354.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:28:59 Heat of formation + Delta-G solvation = 100.983843 kcal Electronic energy + Delta-G solvation = -17864.120403 eV Core-core repulsion = 14907.032566 eV Total energy + Delta-G solvation = -2957.087838 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 283.023 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -39.13125 -36.46348 -35.98050 -35.79549 -32.27163 -31.38081 -30.17092 -29.99165 -26.25245 -25.76696 -22.37025 -22.34803 -20.56902 -17.54226 -16.82326 -16.28983 -15.50366 -15.42392 -15.00126 -13.96790 -13.77484 -13.53888 -13.37236 -13.15343 -12.45694 -11.90684 -11.78430 -11.49148 -11.33400 -11.25210 -10.91379 -10.88716 -10.66200 -10.59038 -10.35554 -10.10518 -9.94668 -8.82826 -8.79668 -8.39683 -8.24203 -8.17108 -7.19732 -5.84100 -3.17876 1.41686 1.52353 2.24945 2.70312 3.34200 3.41277 3.43188 3.86594 4.31481 4.51621 4.65970 5.00112 5.18241 5.30172 5.51128 5.56784 5.67825 5.72088 5.98416 6.10942 6.13902 6.31544 6.46826 6.59269 6.74115 6.87226 7.03629 7.38412 7.53592 7.69356 8.16070 9.04239 9.39891 9.69363 10.11825 11.16497 Molecular weight = 283.02amu Principal moments of inertia in cm(-1) A = 0.022909 B = 0.006821 C = 0.006164 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1221.956513 B = 4104.182086 C = 4541.106619 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.307 4.307 2 C -0.077 4.077 3 C 0.265 3.735 4 N -0.574 5.574 5 C -0.263 4.263 6 H 0.080 0.920 7 C 0.004 3.996 8 N -0.882 5.882 9 Si 0.902 3.098 10 H -0.286 1.286 11 H -0.293 1.293 12 H -0.280 1.280 13 C 0.176 3.824 14 C -0.068 4.068 15 C -0.093 4.093 16 C -0.109 4.109 17 C -0.122 4.122 18 C -0.030 4.030 19 Cl -0.069 7.069 20 C -0.014 4.014 21 Cl -0.052 7.052 22 H 0.183 0.817 23 H 0.100 0.900 24 H 0.038 0.962 25 H 0.255 0.745 26 H 0.060 0.940 27 H 0.068 0.932 28 H 0.131 0.869 29 H 0.128 0.872 30 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.947 2.357 11.340 11.621 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.327 4.327 2 C -0.080 4.080 3 C 0.140 3.860 4 N -0.291 5.291 5 C -0.391 4.391 6 H 0.098 0.902 7 C -0.195 4.195 8 N -0.525 5.525 9 Si 0.731 3.269 10 H -0.213 1.213 11 H -0.220 1.220 12 H -0.206 1.206 13 C 0.049 3.951 14 C -0.073 4.073 15 C -0.113 4.113 16 C -0.127 4.127 17 C -0.142 4.142 18 C -0.057 4.057 19 Cl -0.041 7.041 20 C -0.042 4.042 21 Cl -0.023 7.023 22 H 0.200 0.800 23 H 0.117 0.883 24 H 0.056 0.944 25 H 0.066 0.934 26 H 0.078 0.922 27 H 0.086 0.914 28 H 0.149 0.851 29 H 0.146 0.854 30 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -1.004 2.011 11.190 11.414 hybrid contribution -0.548 0.373 -0.979 1.183 sum -1.552 2.384 10.211 10.600 Atomic orbital electron populations 1.23969 0.95140 1.04719 1.08844 1.23878 0.94853 0.96128 0.93144 1.18204 0.83253 0.84725 0.99786 1.44572 1.73880 1.10048 1.00631 1.19291 1.36596 0.97884 0.85364 0.90172 1.24836 0.97715 0.99011 0.97915 1.70198 1.28231 1.32342 1.21702 0.86294 0.79000 0.78754 0.82803 1.21328 1.21981 1.20590 1.20111 0.91084 0.97936 0.85987 1.21149 1.00247 0.92767 0.93132 1.21054 0.97618 0.94364 0.98234 1.21082 0.94291 0.99630 0.97747 1.20789 1.00730 0.90612 1.02055 1.20700 0.92275 0.91546 1.01210 1.98343 1.61711 1.66404 1.77605 1.20537 0.95818 0.86081 1.01804 1.98348 1.95293 1.11604 1.97011 0.79995 0.88286 0.94359 0.93378 0.92180 0.91394 0.85123 0.85413 0.85179 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 20. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.31 -7.33 19.22 29.55 0.57 -6.76 16 2 C -0.08 -1.88 8.89 -37.12 -0.33 -2.21 16 3 C 0.26 6.22 4.87 -6.83 -0.03 6.19 16 4 N -0.57 -13.33 2.49 -177.95 -0.44 -13.77 16 5 C -0.26 -6.68 9.69 -15.06 -0.15 -6.83 16 6 H 0.08 1.97 7.92 -52.49 -0.42 1.55 16 7 C 0.00 0.12 5.00 -17.43 -0.09 0.03 16 8 N -0.88 -24.38 8.85 55.49 0.49 -23.89 16 9 Si 0.90 20.90 29.62 -169.99 -5.03 15.86 16 10 H -0.29 -6.63 7.11 56.52 0.40 -6.23 16 11 H -0.29 -7.01 7.11 56.52 0.40 -6.61 16 12 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 13 C 0.18 3.37 5.41 -5.19 -0.03 3.34 16 14 C -0.07 -1.25 5.47 -104.59 -0.57 -1.83 16 15 C -0.09 -1.55 9.68 -39.58 -0.38 -1.93 16 16 C -0.11 -1.59 10.04 -39.58 -0.40 -1.99 16 17 C -0.12 -1.82 9.83 -39.55 -0.39 -2.21 16 18 C -0.03 -0.50 6.32 -39.46 -0.25 -0.75 16 19 Cl -0.07 -1.07 27.96 -51.86 -1.45 -2.52 16 20 C -0.01 -0.25 5.87 -39.47 -0.23 -0.49 16 21 Cl -0.05 -0.93 22.25 -51.86 -1.15 -2.08 16 22 H 0.18 3.88 7.80 -54.08 -0.42 3.45 16 23 H 0.10 2.56 6.20 -51.93 -0.32 2.24 16 24 H 0.04 0.81 6.62 -51.93 -0.34 0.47 16 25 H 0.26 6.99 8.31 -40.82 -0.34 6.65 16 26 H 0.06 1.07 6.86 -51.93 -0.36 0.71 16 27 H 0.07 1.20 7.93 -51.93 -0.41 0.79 16 28 H 0.13 2.00 8.06 -52.49 -0.42 1.58 16 29 H 0.13 1.46 8.06 -52.49 -0.42 1.04 16 30 H 0.13 1.60 8.06 -52.49 -0.42 1.18 16 LS Contribution 288.61 15.07 4.35 4.35 Total: -1.00 -28.44 288.61 -8.19 -36.63 By element: Atomic # 1 Polarization: 3.53 SS G_CDS: -2.67 Total: 0.85 kcal Atomic # 6 Polarization: -13.16 SS G_CDS: -2.28 Total: -15.44 kcal Atomic # 7 Polarization: -37.70 SS G_CDS: 0.05 Total: -37.65 kcal Atomic # 14 Polarization: 20.90 SS G_CDS: -5.03 Total: 15.86 kcal Atomic # 17 Polarization: -2.00 SS G_CDS: -2.60 Total: -4.60 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -28.44 -8.19 -36.63 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000281444354.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 137.617 kcal (2) G-P(sol) polarization free energy of solvation -28.440 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 109.178 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.194 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.634 kcal (6) G-S(sol) free energy of system = (1) + (5) 100.984 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds