Wall clock time and date at job start Tue Mar 31 2020 05:29:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17397 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 N 1.46496 * 109.47033 * 314.47737 * 3 2 1 5 5 C 1.36936 * 119.99849 * 95.94991 * 4 3 2 6 6 H 1.08000 * 119.99799 * 162.49886 * 5 4 3 7 7 C 1.38809 * 120.00296 * 342.77843 * 5 4 3 8 8 N 1.31622 * 119.99768 * 338.15884 * 7 5 4 9 9 Si 1.86801 * 120.00193 * 158.15903 * 7 5 4 10 10 H 1.48500 * 109.46920 * 59.99943 * 9 7 5 11 11 H 1.48499 * 109.47092 * 179.97438 * 9 7 5 12 12 H 1.48503 * 109.47080 * 299.99806 * 9 7 5 13 13 C 1.46499 * 120.00118 * 275.94664 * 4 3 2 14 14 C 1.50706 * 109.47104 * 270.00401 * 13 4 3 15 15 C 1.38264 * 119.97882 * 269.72313 * 14 13 4 16 16 C 1.38206 * 120.03555 * 179.77009 * 15 14 13 17 17 C 1.38344 * 120.00115 * 0.50632 * 16 15 14 18 18 Cl 1.73596 * 120.02271 * 179.72875 * 17 16 15 19 19 C 1.38445 * 119.95999 * 359.74677 * 17 16 15 20 20 Cl 1.73605 * 120.02110 * 180.02562 * 19 17 16 21 21 C 1.38203 * 119.97825 * 89.99941 * 14 13 4 22 22 H 4.40642 * 5.51353 * 179.97438 * 4 1 2 23 23 H 1.08998 * 109.46425 * 194.47848 * 3 2 1 24 24 H 1.08998 * 109.46822 * 74.47644 * 3 2 1 25 25 H 0.96996 * 119.99888 * 179.97438 * 8 7 5 26 26 H 1.08998 * 109.46702 * 30.00385 * 13 4 3 27 27 H 1.08998 * 109.47212 * 150.00336 * 13 4 3 28 28 H 1.07999 * 119.97944 * 359.97438 * 15 14 13 29 29 H 1.07998 * 120.00144 * 180.25384 * 16 15 14 30 30 H 1.07997 * 120.00614 * 359.95613 * 21 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1348 -0.9668 0.9855 5 6 3.4794 -2.2318 0.5904 6 1 4.0931 -2.8489 1.2300 7 6 3.0450 -2.7190 -0.6346 8 7 1.9906 -2.1886 -1.2172 9 14 3.9567 -4.1272 -1.4563 10 1 3.9332 -5.3172 -0.5683 11 1 3.2974 -4.4587 -2.7450 12 1 5.3639 -3.7255 -1.7087 13 6 3.2548 -0.5810 2.3937 14 6 4.6282 -0.0129 2.6435 15 6 5.6612 -0.8470 3.0293 16 6 6.9222 -0.3281 3.2541 17 6 7.1490 1.0283 3.1034 18 17 8.7311 1.6818 3.3925 19 6 6.1134 1.8643 2.7222 20 17 6.3964 3.5665 2.5320 21 6 4.8529 1.3424 2.4925 22 1 -1.0499 0.0000 0.0003 23 1 3.0088 0.9959 0.2569 24 1 3.0094 -0.2742 -0.9902 25 1 1.6872 -2.5288 -2.0734 26 1 2.5020 0.1712 2.6297 27 1 3.1036 -1.4568 3.0246 28 1 5.4833 -1.9052 3.1518 29 1 7.7296 -0.9807 3.5514 30 1 4.0447 1.9939 2.1948 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000281448137.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:29:03 Heat of formation + Delta-G solvation = 89.868585 kcal Electronic energy + Delta-G solvation = -17105.039858 eV Core-core repulsion = 14147.470026 eV Total energy + Delta-G solvation = -2957.569832 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 283.023 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -39.31232 -36.72123 -36.39131 -35.79550 -32.20977 -31.63009 -30.69763 -29.90899 -26.41910 -25.72253 -22.71256 -22.35673 -20.67720 -17.52723 -17.16609 -16.31771 -15.61804 -15.47850 -15.12145 -13.98967 -13.84758 -13.65603 -13.57152 -13.43957 -12.77907 -11.91803 -11.78895 -11.75424 -11.47982 -11.37860 -10.98250 -10.94052 -10.82898 -10.76474 -10.68198 -10.34899 -10.07298 -9.03564 -8.89913 -8.72977 -8.50471 -8.34231 -7.12716 -5.87266 -3.30095 1.21579 1.34559 1.97427 2.35314 3.32683 3.40382 3.40993 3.68679 4.15493 4.32305 4.47505 4.80634 5.11027 5.29730 5.37527 5.45876 5.57958 5.62144 5.77497 5.84619 6.11075 6.17325 6.32712 6.45922 6.64738 6.85047 6.88849 7.16248 7.35778 7.65838 8.17645 9.00260 9.12626 9.66351 10.11135 11.16198 Molecular weight = 283.02amu Principal moments of inertia in cm(-1) A = 0.019143 B = 0.005291 C = 0.004518 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1462.304481 B = 5290.787193 C = 6196.146534 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.298 4.298 2 C -0.098 4.098 3 C 0.267 3.733 4 N -0.577 5.577 5 C -0.271 4.271 6 H 0.075 0.925 7 C 0.008 3.992 8 N -0.886 5.886 9 Si 0.899 3.101 10 H -0.283 1.283 11 H -0.291 1.291 12 H -0.283 1.283 13 C 0.178 3.822 14 C -0.059 4.059 15 C -0.086 4.086 16 C -0.102 4.102 17 C -0.044 4.044 18 Cl -0.068 7.068 19 C -0.030 4.030 20 Cl -0.066 7.066 21 C -0.095 4.095 22 H 0.191 0.809 23 H 0.036 0.964 24 H 0.097 0.903 25 H 0.256 0.744 26 H 0.054 0.946 27 H 0.066 0.934 28 H 0.136 0.864 29 H 0.135 0.865 30 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.624 7.182 8.459 13.463 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.317 4.317 2 C -0.100 4.100 3 C 0.142 3.858 4 N -0.295 5.295 5 C -0.399 4.399 6 H 0.093 0.907 7 C -0.192 4.192 8 N -0.528 5.528 9 Si 0.729 3.271 10 H -0.209 1.209 11 H -0.216 1.216 12 H -0.209 1.209 13 C 0.050 3.950 14 C -0.063 4.063 15 C -0.105 4.105 16 C -0.121 4.121 17 C -0.072 4.072 18 Cl -0.039 7.039 19 C -0.058 4.058 20 Cl -0.037 7.037 21 C -0.114 4.114 22 H 0.208 0.792 23 H 0.054 0.946 24 H 0.115 0.885 25 H 0.067 0.933 26 H 0.072 0.928 27 H 0.084 0.916 28 H 0.154 0.846 29 H 0.153 0.847 30 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 7.706 7.308 8.277 13.465 hybrid contribution 0.350 -0.701 -0.662 1.026 sum 8.057 6.607 7.615 12.905 Atomic orbital electron populations 1.24204 0.95363 1.06861 1.05257 1.24236 0.95245 0.94552 0.96013 1.17788 0.82839 0.89712 0.95454 1.43978 1.74336 1.10508 1.00708 1.19105 1.26699 0.91264 1.02825 0.90690 1.24895 0.96317 0.98525 0.99449 1.70120 1.21195 1.43705 1.17813 0.86424 0.79755 0.81979 0.78991 1.20905 1.21646 1.20937 1.19837 0.89081 0.98351 0.87684 1.21292 0.99982 0.92000 0.93031 1.21164 0.91299 1.00558 0.97481 1.20996 0.98252 0.92138 1.00698 1.20631 0.86076 0.93567 1.06915 1.98351 1.24539 1.86393 1.94666 1.20745 0.94518 0.85022 1.05470 1.98358 1.96483 1.12817 1.96009 1.20964 0.94532 0.95783 1.00128 0.79204 0.94597 0.88503 0.93332 0.92812 0.91603 0.84590 0.84684 0.84568 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.30 -6.56 19.25 29.55 0.57 -5.99 16 2 C -0.10 -2.29 11.60 -37.12 -0.43 -2.72 16 3 C 0.27 6.04 5.41 -6.83 -0.04 6.00 16 4 N -0.58 -13.01 2.48 -177.95 -0.44 -13.45 16 5 C -0.27 -6.77 9.66 -15.06 -0.15 -6.91 16 6 H 0.08 1.81 7.92 -52.49 -0.42 1.39 16 7 C 0.01 0.20 4.86 -17.43 -0.08 0.12 16 8 N -0.89 -24.28 9.50 55.49 0.53 -23.76 16 9 Si 0.90 20.76 29.61 -169.99 -5.03 15.73 16 10 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 11 H -0.29 -6.86 7.11 56.52 0.40 -6.46 16 12 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 13 C 0.18 3.25 5.80 -5.19 -0.03 3.22 16 14 C -0.06 -0.96 5.46 -104.62 -0.57 -1.53 16 15 C -0.09 -1.28 9.70 -39.58 -0.38 -1.66 16 16 C -0.10 -1.39 9.83 -39.55 -0.39 -1.78 16 17 C -0.04 -0.63 6.32 -39.47 -0.25 -0.88 16 18 Cl -0.07 -0.88 27.96 -51.86 -1.45 -2.33 16 19 C -0.03 -0.44 6.32 -39.46 -0.25 -0.69 16 20 Cl -0.07 -0.89 27.96 -51.86 -1.45 -2.34 16 21 C -0.09 -1.44 9.48 -39.55 -0.38 -1.81 16 22 H 0.19 3.50 7.80 -54.10 -0.42 3.08 16 23 H 0.04 0.71 8.12 -51.93 -0.42 0.29 16 24 H 0.10 2.43 6.42 -51.93 -0.33 2.10 16 25 H 0.26 6.97 8.31 -40.82 -0.34 6.63 16 26 H 0.05 0.93 8.01 -51.93 -0.42 0.52 16 27 H 0.07 1.18 7.98 -51.93 -0.41 0.77 16 28 H 0.14 1.90 8.06 -52.49 -0.42 1.48 16 29 H 0.14 1.53 8.06 -52.49 -0.42 1.11 16 30 H 0.14 1.95 8.06 -52.49 -0.42 1.53 16 LS Contribution 301.25 15.07 4.54 4.54 Total: -1.00 -27.51 301.25 -8.51 -36.02 By element: Atomic # 1 Polarization: 3.06 SS G_CDS: -2.83 Total: 0.24 kcal Atomic # 6 Polarization: -12.26 SS G_CDS: -2.38 Total: -14.64 kcal Atomic # 7 Polarization: -37.30 SS G_CDS: 0.09 Total: -37.21 kcal Atomic # 14 Polarization: 20.76 SS G_CDS: -5.03 Total: 15.73 kcal Atomic # 17 Polarization: -1.77 SS G_CDS: -2.90 Total: -4.67 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -27.51 -8.51 -36.02 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000281448137.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 125.888 kcal (2) G-P(sol) polarization free energy of solvation -27.510 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 98.378 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.510 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.019 kcal (6) G-S(sol) free energy of system = (1) + (5) 89.869 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds